BLASTX nr result

ID: Coptis24_contig00008647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008647
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259...   464   e-128
ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|2...   454   e-125
ref|XP_002331736.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_002331740.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123
ref|XP_004173680.1| PREDICTED: leucine-rich repeat extensin-like...   447   e-123

>ref|XP_002281292.2| PREDICTED: uncharacterized protein LOC100259389 [Vitis vinifera]
          Length = 752

 Score =  464 bits (1194), Expect = e-128
 Identities = 227/291 (78%), Positives = 251/291 (86%)
 Frame = +1

Query: 166  SSQETFISSTSDLTDAQVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIAL 345
            S+++  ISS   LTDA+V YI+ RQLLYYRDEFGDRGE+V+ DPSLVFENPR +NAYIAL
Sbjct: 26   SAEQISISSHGHLTDAEVMYIKRRQLLYYRDEFGDRGEDVTVDPSLVFENPRQRNAYIAL 85

Query: 346  QAWKQAIISDPLNQTGNWVGSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEE 525
            QAWKQAI+SDPLN T NWVGS+VC+YTGV+C  A D+S+I+TVAGIDLNHGDIAGYLPEE
Sbjct: 86   QAWKQAILSDPLNLTLNWVGSNVCNYTGVYCAQAPDNSSIRTVAGIDLNHGDIAGYLPEE 145

Query: 526  LGLLVDLALFHINSNRFCGTVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDL 705
            LGLL DLALFHINSNRFCGTVPH           DLSNNRFAG+FP VVL LP+LKFLDL
Sbjct: 146  LGLLTDLALFHINSNRFCGTVPHKFAKLKILFELDLSNNRFAGKFPEVVLHLPTLKFLDL 205

Query: 706  RFNEFEGSVPSELFDKDLDAIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLG 885
            RFNEFEG+VP ELFDKDLDAIFIN+N+FAFDLP NFGNSPVSVIV+ANNK HGC+PASLG
Sbjct: 206  RFNEFEGTVPKELFDKDLDAIFINHNRFAFDLPDNFGNSPVSVIVVANNKLHGCVPASLG 265

Query: 886  NMAGTLNEIILMNNGLRSCFPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGM 1038
            NMA TLNEIILMNN  RSC P EIGLL NLTVLDVS+N L+GPLP  IGGM
Sbjct: 266  NMADTLNEIILMNNQFRSCLPVEIGLLKNLTVLDVSYNGLLGPLPKEIGGM 316


>ref|XP_002324974.1| predicted protein [Populus trichocarpa] gi|222866408|gb|EEF03539.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  454 bits (1168), Expect = e-125
 Identities = 225/295 (76%), Positives = 246/295 (83%), Gaps = 2/295 (0%)
 Frame = +1

Query: 160  CISS--QETFISSTSDLTDAQVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNA 333
            C+S+  Q   ISS   L+DA   YI+ RQLLYY+DEFGDRGE V+ DPSLVF NPR++NA
Sbjct: 24   CLSAAKQAPTISSYGGLSDADAMYIKKRQLLYYKDEFGDRGERVTVDPSLVFPNPRLRNA 83

Query: 334  YIALQAWKQAIISDPLNQTGNWVGSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGY 513
            YIALQAWKQAI SDPLN T NWVGS VC+Y GVFC  A D+ TI+TVAGIDLNHGDIAGY
Sbjct: 84   YIALQAWKQAIFSDPLNLTANWVGSQVCNYEGVFCAPAPDNKTIRTVAGIDLNHGDIAGY 143

Query: 514  LPEELGLLVDLALFHINSNRFCGTVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLK 693
            LPEELGLLVD+ALFHINSNRFCGTVP            DLSNNRFAG+FP VVL+LPSLK
Sbjct: 144  LPEELGLLVDIALFHINSNRFCGTVPRKFKDMRLLFELDLSNNRFAGKFPQVVLKLPSLK 203

Query: 694  FLDLRFNEFEGSVPSELFDKDLDAIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLP 873
            FLDLRFNEFEG+VP ELFDKDLDAIFIN+N+F FDLP N GNSPVSVIVLANNKFHGC+P
Sbjct: 204  FLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFDLPENLGNSPVSVIVLANNKFHGCVP 263

Query: 874  ASLGNMAGTLNEIILMNNGLRSCFPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGM 1038
            +SLGNM+  LNEIILMNNG RSC P EIGLL +LTVLDVSFNQLMGPLPD  GGM
Sbjct: 264  SSLGNMS-NLNEIILMNNGFRSCMPAEIGLLKDLTVLDVSFNQLMGPLPDAFGGM 317


>ref|XP_002331736.1| predicted protein [Populus trichocarpa] gi|222874139|gb|EEF11270.1|
            predicted protein [Populus trichocarpa]
          Length = 420

 Score =  451 bits (1160), Expect = e-124
 Identities = 218/272 (80%), Positives = 237/272 (87%)
 Frame = +1

Query: 223  YIRHRQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQAWKQAIISDPLNQTGNWV 402
            YI  RQLLYY+DEFGDRGE V+ DPSLVFENPR+KNAY+ALQAWKQAI SDPLN T NWV
Sbjct: 2    YIDKRQLLYYKDEFGDRGERVTVDPSLVFENPRLKNAYMALQAWKQAIFSDPLNLTANWV 61

Query: 403  GSDVCSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCG 582
            GS VC+Y GVFC+ A D+ TI+TVAGIDLNHGDIAGYLPEELG LVDLALFHINSNRFCG
Sbjct: 62   GSQVCNYEGVFCSRAPDNKTIRTVAGIDLNHGDIAGYLPEELGFLVDLALFHINSNRFCG 121

Query: 583  TVPHXXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDLRFNEFEGSVPSELFDKDLD 762
            T+PH           DLSNNRFAG+FP VVL+LPSLKFLDLRFNEFEG+VP ELFDKDLD
Sbjct: 122  TIPHKFKKLRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVPKELFDKDLD 181

Query: 763  AIFINNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLGNMAGTLNEIILMNNGLRSC 942
            AIFIN+N+F FDLP NFGNSPVSVIVLANNKFHGC+P+SLGNM+  LNEIILMNNG RSC
Sbjct: 182  AIFINHNRFVFDLPVNFGNSPVSVIVLANNKFHGCVPSSLGNMS-NLNEIILMNNGFRSC 240

Query: 943  FPEEIGLLTNLTVLDVSFNQLMGPLPDTIGGM 1038
             P EIGLL NLTV DVSFNQL+GPLPDT+GGM
Sbjct: 241  LPAEIGLLKNLTVFDVSFNQLIGPLPDTVGGM 272


>ref|XP_002331740.1| predicted protein [Populus trichocarpa] gi|222874266|gb|EEF11397.1|
            predicted protein [Populus trichocarpa]
          Length = 415

 Score =  448 bits (1152), Expect = e-123
 Identities = 216/268 (80%), Positives = 235/268 (87%)
 Frame = +1

Query: 235  RQLLYYRDEFGDRGENVSTDPSLVFENPRIKNAYIALQAWKQAIISDPLNQTGNWVGSDV 414
            RQLLYY+DEFGDRGE V+ DPSLVFENPR+KNAY+ALQAWKQAI SDPLN T NWVGS V
Sbjct: 1    RQLLYYKDEFGDRGERVTVDPSLVFENPRLKNAYMALQAWKQAIFSDPLNLTANWVGSQV 60

Query: 415  CSYTGVFCTNATDDSTIQTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPH 594
            C+Y GVFC+ A D+ TI+TVAGIDLNHGDIAGYLPEELG LVDLALFHINSNRFCGT+PH
Sbjct: 61   CNYEGVFCSRAPDNKTIRTVAGIDLNHGDIAGYLPEELGFLVDLALFHINSNRFCGTIPH 120

Query: 595  XXXXXXXXXXXDLSNNRFAGRFPGVVLQLPSLKFLDLRFNEFEGSVPSELFDKDLDAIFI 774
                       DLSNNRFAG+FP VVL+LPSLKFLDLRFNEFEG+VP ELFDKDLDAIFI
Sbjct: 121  KFKKLRLLFELDLSNNRFAGKFPQVVLKLPSLKFLDLRFNEFEGTVPKELFDKDLDAIFI 180

Query: 775  NNNQFAFDLPSNFGNSPVSVIVLANNKFHGCLPASLGNMAGTLNEIILMNNGLRSCFPEE 954
            N+N+F FDLP NFGNSPVSVIVLANNKFHGC+P+SLGNM+  LNEIILMNNG RSC P E
Sbjct: 181  NHNRFVFDLPVNFGNSPVSVIVLANNKFHGCVPSSLGNMS-NLNEIILMNNGFRSCLPAE 239

Query: 955  IGLLTNLTVLDVSFNQLMGPLPDTIGGM 1038
            IGLL NLTV DVSFNQL+GPLPDT+GGM
Sbjct: 240  IGLLKNLTVFDVSFNQLIGPLPDTVGGM 267


>ref|XP_004173680.1| PREDICTED: leucine-rich repeat extensin-like protein 5-like, partial
            [Cucumis sativus]
          Length = 451

 Score =  447 bits (1149), Expect = e-123
 Identities = 225/301 (74%), Positives = 243/301 (80%), Gaps = 8/301 (2%)
 Frame = +1

Query: 160  CISSQ----ETFISSTSD----LTDAQVKYIRHRQLLYYRDEFGDRGENVSTDPSLVFEN 315
            C+SS     E F  ++S     LTDA+  YIR RQLLYYRDEFGDRGE V  DP LVFEN
Sbjct: 25   CLSSSSSALEEFRQASSHGGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDPKLVFEN 84

Query: 316  PRIKNAYIALQAWKQAIISDPLNQTGNWVGSDVCSYTGVFCTNATDDSTIQTVAGIDLNH 495
             RI+NAYIALQAWKQAI+SDPLN T NWVGSDVC Y GVFC  A D+S+I+TVAGIDLNH
Sbjct: 85   DRIRNAYIALQAWKQAILSDPLNLTKNWVGSDVCHYKGVFCAPAPDNSSIRTVAGIDLNH 144

Query: 496  GDIAGYLPEELGLLVDLALFHINSNRFCGTVPHXXXXXXXXXXXDLSNNRFAGRFPGVVL 675
            GDIAGYLPEELGLLVDLALFHINSNRFCGTVPH           DLSNNRFAG+FP VVL
Sbjct: 145  GDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKLLFELDLSNNRFAGKFPRVVL 204

Query: 676  QLPSLKFLDLRFNEFEGSVPSELFDKDLDAIFINNNQFAFDLPSNFGNSPVSVIVLANNK 855
            +LP LKFLDLRFNEFEG+VP ELFDKDLDAIFIN+N+F FDLP NFGNSPVSVIVLANNK
Sbjct: 205  ELPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFDLPENFGNSPVSVIVLANNK 264

Query: 856  FHGCLPASLGNMAGTLNEIILMNNGLRSCFPEEIGLLTNLTVLDVSFNQLMGPLPDTIGG 1035
            FHGC+P S+GNM   LNEIILMNNG RSC P EIG L NLTV DVS N+  G LP+TIGG
Sbjct: 265  FHGCVPGSIGNMT-RLNEIILMNNGFRSCLPSEIGFLKNLTVFDVSHNEFFGKLPETIGG 323

Query: 1036 M 1038
            M
Sbjct: 324  M 324


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