BLASTX nr result
ID: Coptis24_contig00008641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008641 (417 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu... 196 1e-48 emb|CBI23877.3| unnamed protein product [Vitis vinifera] 195 3e-48 ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V... 195 3e-48 ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro... 194 8e-48 gb|AFK37698.1| unknown [Lotus japonicus] 193 1e-47 >ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula] gi|355515149|gb|AES96772.1| 50S ribosomal protein L18 [Medicago truncatula] Length = 189 Score = 196 bits (499), Expect = 1e-48 Identities = 93/117 (79%), Positives = 103/117 (88%) Frame = +3 Query: 3 NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182 N RKESAK+RNR++ KKFNG++ PRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQK R Sbjct: 48 NARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKLFR 107 Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 353 +NP CSTIEAAQRVGE LVKAC+DL INEISSYDRNGF RGE++ AFE+AIS GFL Sbjct: 108 ENPPCSTIEAAQRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFEIAISNFGFL 164 >emb|CBI23877.3| unnamed protein product [Vitis vinifera] Length = 164 Score = 195 bits (496), Expect = 3e-48 Identities = 94/117 (80%), Positives = 105/117 (89%) Frame = +3 Query: 3 NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182 N +K+SAK+RNRRL +KFNGS +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI Sbjct: 46 NAKKDSAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIH 105 Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 353 N CS IEAA+RVGEELVKACID +INEISSYDRNGF+RGE+MQAFE+AISRHGFL Sbjct: 106 GNNPCSAIEAAERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 162 >ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera] Length = 177 Score = 195 bits (496), Expect = 3e-48 Identities = 94/117 (80%), Positives = 105/117 (89%) Frame = +3 Query: 3 NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182 N +K+SAK+RNRRL +KFNGS +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI Sbjct: 59 NAKKDSAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIH 118 Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 353 N CS IEAA+RVGEELVKACID +INEISSYDRNGF+RGE+MQAFE+AISRHGFL Sbjct: 119 GNNPCSAIEAAERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 175 >ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis sativus] Length = 180 Score = 194 bits (492), Expect = 8e-48 Identities = 93/118 (78%), Positives = 106/118 (89%) Frame = +3 Query: 3 NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182 N++ ESAKVRNRR+ KK+NG+ RPRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQKS+R Sbjct: 63 NSKTESAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMR 122 Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFLK 356 PSC+TIEAAQ VGEELVK C+DL I+EIS YDRNGF+ GEKMQAFE+AISR+GFL+ Sbjct: 123 PTPSCTTIEAAQHVGEELVKVCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180 >gb|AFK37698.1| unknown [Lotus japonicus] Length = 164 Score = 193 bits (490), Expect = 1e-47 Identities = 91/118 (77%), Positives = 104/118 (88%) Frame = +3 Query: 3 NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182 NTR ES K+RNRR+ KKFNG++ PRLSVFCSDKQLYA LVDD+NKKCLFYGSTL KS R Sbjct: 46 NTRTESPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLHKSFR 105 Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFLK 356 +NP CST+EAAQRVGE LVKAC DLKINEISSYDRNGF RG+++ AFE+AIS +GFL+ Sbjct: 106 ENPPCSTVEAAQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAFEIAISSYGFLQ 163