BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008641
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   196   1e-48
emb|CBI23877.3| unnamed protein product [Vitis vinifera]              195   3e-48
ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [V...   195   3e-48
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   194   8e-48
gb|AFK37698.1| unknown [Lotus japonicus]                              193   1e-47

>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  196 bits (499), Expect = 1e-48
 Identities = 93/117 (79%), Positives = 103/117 (88%)
 Frame = +3

Query: 3   NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182
           N RKESAK+RNR++ KKFNG++  PRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQK  R
Sbjct: 48  NARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKLFR 107

Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 353
           +NP CSTIEAAQRVGE LVKAC+DL INEISSYDRNGF RGE++ AFE+AIS  GFL
Sbjct: 108 ENPPCSTIEAAQRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFEIAISNFGFL 164


>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/117 (80%), Positives = 105/117 (89%)
 Frame = +3

Query: 3   NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182
           N +K+SAK+RNRRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI 
Sbjct: 46  NAKKDSAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIH 105

Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 353
            N  CS IEAA+RVGEELVKACID +INEISSYDRNGF+RGE+MQAFE+AISRHGFL
Sbjct: 106 GNNPCSAIEAAERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 162


>ref|XP_002276553.1| PREDICTED: 50S ribosomal protein L18-like [Vitis vinifera]
          Length = 177

 Score =  195 bits (496), Expect = 3e-48
 Identities = 94/117 (80%), Positives = 105/117 (89%)
 Frame = +3

Query: 3   NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182
           N +K+SAK+RNRRL +KFNGS  +PRLSVFCS KQLYA LVDDQNK+CLFYGSTLQKSI 
Sbjct: 59  NAKKDSAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFYGSTLQKSIH 118

Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFL 353
            N  CS IEAA+RVGEELVKACID +INEISSYDRNGF+RGE+MQAFE+AISRHGFL
Sbjct: 119 GNNPCSAIEAAERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAISRHGFL 175


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/118 (78%), Positives = 106/118 (89%)
 Frame = +3

Query: 3   NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182
           N++ ESAKVRNRR+ KK+NG+  RPRLSVFCSDKQLYA LVDDQNKKCLFYGSTLQKS+R
Sbjct: 63  NSKTESAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFYGSTLQKSMR 122

Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFLK 356
             PSC+TIEAAQ VGEELVK C+DL I+EIS YDRNGF+ GEKMQAFE+AISR+GFL+
Sbjct: 123 PTPSCTTIEAAQHVGEELVKVCMDLNIHEISLYDRNGFACGEKMQAFEIAISRYGFLQ 180


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/118 (77%), Positives = 104/118 (88%)
 Frame = +3

Query: 3   NTRKESAKVRNRRLHKKFNGSSVRPRLSVFCSDKQLYATLVDDQNKKCLFYGSTLQKSIR 182
           NTR ES K+RNRR+ KKFNG++  PRLSVFCSDKQLYA LVDD+NKKCLFYGSTL KS R
Sbjct: 46  NTRTESPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKCLFYGSTLHKSFR 105

Query: 183 DNPSCSTIEAAQRVGEELVKACIDLKINEISSYDRNGFSRGEKMQAFEVAISRHGFLK 356
           +NP CST+EAAQRVGE LVKAC DLKINEISSYDRNGF RG+++ AFE+AIS +GFL+
Sbjct: 106 ENPPCSTVEAAQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAFEIAISSYGFLQ 163