BLASTX nr result

ID: Coptis24_contig00008636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008636
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521961.1| cyclophilin, putative [Ricinus communis] gi|...   282   7e-74
gb|ACG70968.1| cyclophilin [Ziziphus jujuba]                          282   9e-74
gb|AFK44397.1| unknown [Lotus japonicus]                              280   3e-73
ref|XP_002325319.1| predicted protein [Populus trichocarpa] gi|2...   280   3e-73
gb|AAV48823.1| cyclophilin 1 [Codonopsis lanceolata]                  277   2e-72

>ref|XP_002521961.1| cyclophilin, putative [Ricinus communis]
           gi|223538765|gb|EEF40365.1| cyclophilin, putative
           [Ricinus communis]
          Length = 174

 Score =  282 bits (722), Expect = 7e-74
 Identities = 137/174 (78%), Positives = 147/174 (84%)
 Frame = +3

Query: 192 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 371
           M+NPKVFFDI IGK KAGRIVMELF D TPKTAENFRALCTGEKGIG  GKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADFTPKTAENFRALCTGEKGIGSVGKPLHYKGSTF 60

Query: 372 HRIIPSFMCQXXXXXXXXXXXXESIYGEKFADENFKLKHTGPGILSMANAGANTNGSQFF 551
           HRIIP+FMCQ            ESIYG KFADENFK+KHTGPGILSMANAG NTNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFF 120

Query: 552 ICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSSTVVIEDSGEVTES 713
           ICTEKT WLDGKHVVFGKVVDGYSVV++MEKVGS +G TS  VVIED G++TE+
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYSVVKEMEKVGSESGRTSQGVVIEDCGQITEN 174


>gb|ACG70968.1| cyclophilin [Ziziphus jujuba]
          Length = 174

 Score =  282 bits (721), Expect = 9e-74
 Identities = 136/172 (79%), Positives = 146/172 (84%)
 Frame = +3

Query: 192 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 371
           M+NPKVFFDI IGK KAGR+VMELF DVTPKTAENFR LCTGEKGIG SGKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRVLCTGEKGIGISGKPLHYKGSTF 60

Query: 372 HRIIPSFMCQXXXXXXXXXXXXESIYGEKFADENFKLKHTGPGILSMANAGANTNGSQFF 551
           HRIIP+FMCQ            ESIYG KFADENFKLKHTGPGILSMANAG NTNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGTKFADENFKLKHTGPGILSMANAGPNTNGSQFF 120

Query: 552 ICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSSTVVIEDSGEVT 707
           ICTEKT WLDGKHVVFGKVVDGY+VV++MEKVGS +G TS  VVIED G++T
Sbjct: 121 ICTEKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSDSGRTSQPVVIEDCGQIT 172


>gb|AFK44397.1| unknown [Lotus japonicus]
          Length = 174

 Score =  280 bits (717), Expect = 3e-73
 Identities = 136/174 (78%), Positives = 146/174 (83%)
 Frame = +3

Query: 192 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 371
           M NPKVFFDIAIGKTKAGRI+MELF DVTPKTAENFRALCTGEKGIG+SGK +H+KGS F
Sbjct: 1   MTNPKVFFDIAIGKTKAGRILMELFADVTPKTAENFRALCTGEKGIGKSGKGLHFKGSAF 60

Query: 372 HRIIPSFMCQXXXXXXXXXXXXESIYGEKFADENFKLKHTGPGILSMANAGANTNGSQFF 551
           HRIIP FMCQ            ESIYG KFADENFKLKHTGPGILSMANAG NTNGSQFF
Sbjct: 61  HRIIPDFMCQGGDFTRGNGTGGESIYGAKFADENFKLKHTGPGILSMANAGPNTNGSQFF 120

Query: 552 ICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSSTVVIEDSGEVTES 713
           ICT KT WLDGKHVVFGKVVDGY+VV++MEKVGS  G TS  VVIED G++ E+
Sbjct: 121 ICTAKTPWLDGKHVVFGKVVDGYNVVKEMEKVGSGGGSTSEKVVIEDCGQIVEN 174


>ref|XP_002325319.1| predicted protein [Populus trichocarpa]
           gi|224145735|ref|XP_002325747.1| predicted protein
           [Populus trichocarpa] gi|224145746|ref|XP_002325751.1|
           predicted protein [Populus trichocarpa]
           gi|118482658|gb|ABK93248.1| unknown [Populus
           trichocarpa] gi|222862194|gb|EEE99700.1| predicted
           protein [Populus trichocarpa]
           gi|222862622|gb|EEF00129.1| predicted protein [Populus
           trichocarpa] gi|222862626|gb|EEF00133.1| predicted
           protein [Populus trichocarpa]
          Length = 174

 Score =  280 bits (716), Expect = 3e-73
 Identities = 132/174 (75%), Positives = 146/174 (83%)
 Frame = +3

Query: 192 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 371
           M+NPKVFFDI IGK KAGRIVMELF D TPKTAENFRALCTGEKGIG +GKP+HYKGS F
Sbjct: 1   MSNPKVFFDILIGKMKAGRIVMELFADATPKTAENFRALCTGEKGIGNAGKPLHYKGSTF 60

Query: 372 HRIIPSFMCQXXXXXXXXXXXXESIYGEKFADENFKLKHTGPGILSMANAGANTNGSQFF 551
           HRIIP+FMCQ            ESIYG KFADENFKLKHTGPG+LSMAN+G NTNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRGNGTGGESIYGAKFADENFKLKHTGPGVLSMANSGPNTNGSQFF 120

Query: 552 ICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSSTVVIEDSGEVTES 713
           ICTE TSWLDGKHVVFGKVVDGY VV++MEKVGS +G T  TV++ED G++ E+
Sbjct: 121 ICTENTSWLDGKHVVFGKVVDGYGVVQEMEKVGSNSGTTKETVIVEDCGQIIEN 174


>gb|AAV48823.1| cyclophilin 1 [Codonopsis lanceolata]
          Length = 174

 Score =  277 bits (709), Expect = 2e-72
 Identities = 135/174 (77%), Positives = 146/174 (83%)
 Frame = +3

Query: 192 MANPKVFFDIAIGKTKAGRIVMELFKDVTPKTAENFRALCTGEKGIGRSGKPMHYKGSKF 371
           M+NPKVFFDI IGK KAGRIVMELF D TPKTAENFRALCTGEKGIG SGKP+HYKGS F
Sbjct: 1   MSNPKVFFDIVIGKMKAGRIVMELFADSTPKTAENFRALCTGEKGIGLSGKPLHYKGSIF 60

Query: 372 HRIIPSFMCQXXXXXXXXXXXXESIYGEKFADENFKLKHTGPGILSMANAGANTNGSQFF 551
           HRIIP+FMCQ            ESIYG KFADENFK KHTGPGILSMAN+G NTNGSQFF
Sbjct: 61  HRIIPNFMCQGGDFTRFNGTGGESIYGAKFADENFKNKHTGPGILSMANSGPNTNGSQFF 120

Query: 552 ICTEKTSWLDGKHVVFGKVVDGYSVVEQMEKVGSPAGETSSTVVIEDSGEVTES 713
           ICTEKTSWLDGKHVVFGKVVDGYSVV++MEKVGS  G + STV IE+ G++ E+
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYSVVKEMEKVGSDGGNSKSTVEIEECGQIQEN 174


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