BLASTX nr result

ID: Coptis24_contig00008635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008635
         (1522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270995.1| PREDICTED: uncharacterized protein LOC100254...   276   8e-72
ref|XP_002303644.1| predicted protein [Populus trichocarpa] gi|2...   251   3e-64
ref|XP_002299479.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_004149749.1| PREDICTED: uncharacterized protein LOC101203...   228   3e-57
ref|XP_002509953.1| conserved hypothetical protein [Ricinus comm...   209   1e-51

>ref|XP_002270995.1| PREDICTED: uncharacterized protein LOC100254757 [Vitis vinifera]
            gi|297742326|emb|CBI34475.3| unnamed protein product
            [Vitis vinifera]
          Length = 381

 Score =  276 bits (707), Expect = 8e-72
 Identities = 162/373 (43%), Positives = 216/373 (57%), Gaps = 19/373 (5%)
 Frame = +2

Query: 143  FGAESEIKVV-----DPKSRNEQNNTLTSKETLXXXXXXXXXXXXEDKKKNV-------H 286
            +GA+SE+K +     DPK      +T    ETL            E  KK+         
Sbjct: 22   YGADSEVKKLPNSGLDPKKTVVSTHTNIPNETLSGSDSGLDSLKAEQAKKDEDQVGVPKE 81

Query: 287  GTDNLS------KDPDSKEVPKVGTGKDDSSKKPHVKDG-NKKEGTDDGSGSKMVPTGLT 445
            G ++        K  DSKE     TGK   SK+   + G NKKE   DGS SK       
Sbjct: 82   GVESTKEKISSIKQLDSKEADNEHTGKGSLSKELETEGGDNKKEKPGDGSKSKQASKEGG 141

Query: 446  TEGNSVATKPTKKESVRGEECDSSSTCKDEINKLVACLRVPGDESPELSLLIQNKGTSLL 625
             EG   ++KP KKES++GEECD S+ C D+INKLVACLRVPG++SP+LSLLIQNKG + L
Sbjct: 142  NEGVLESSKPGKKESLQGEECDPSNQCVDDINKLVACLRVPGNDSPDLSLLIQNKGKTAL 201

Query: 626  SLKISAPDYVHLETNTVHLQQNEDKKVKVSIGKESKDTFIVLTAKDRNCSINFKDLIPHN 805
            ++ ISAPD+V LE+  + LQ+ EDKKVKVSI     D  IVLTA    CS++FKDLI   
Sbjct: 202  TVTISAPDFVKLESTKIELQEKEDKKVKVSIRNGGSDNSIVLTAGKGRCSLDFKDLIAQI 261

Query: 806  SGKKTDHTAKSAFVDIVTKVPSIVFLSIAAVILVASSWMCVRFRSKHLTGEGTKYQKLET 985
            + K TD+  +S   + +T+  S+ FL + A++  AS+W+C+ F+ K+    G+KYQKL+ 
Sbjct: 262  AQKGTDNIPESTDGNFLTRTSSLAFLFLVALVAAASAWICISFKRKYFPSSGSKYQKLDM 321

Query: 986  ELPVTSAGKKETDVTGKKETXXXXXXXXXXXXXXXXXXXXXEEAPRTPSMPITPSLSSKG 1165
            ELPV+  GK E D+    +                      EEAP+TPSMP+TPSLS++G
Sbjct: 322  ELPVSGGGKVEADINDGWDN-------------SWGDTWDDEEAPKTPSMPLTPSLSARG 368

Query: 1166 LASRRLSKDAWKD 1204
            LA+RRLSK+ WKD
Sbjct: 369  LAARRLSKEGWKD 381


>ref|XP_002303644.1| predicted protein [Populus trichocarpa] gi|222841076|gb|EEE78623.1|
            predicted protein [Populus trichocarpa]
          Length = 288

 Score =  251 bits (642), Expect = 3e-64
 Identities = 137/303 (45%), Positives = 185/303 (61%), Gaps = 1/303 (0%)
 Frame = +2

Query: 299  LSKDPDSKEVPKVGTGKDDSSKKPHVKDGNKKEGTDDGSGSKMVPTGLTTEGNSVATKPT 478
            ++    SK+      GK +SS++   K G+  +  D  SG +     L+ E N      +
Sbjct: 1    MNSQSGSKDNDNAKEGKHNSSEESQAKKGDHSKKEDSSSGVES--EDLSKEKNDKGDTQS 58

Query: 479  KKESVRGEECDSSSTCKDEINKLVACLRVPGDESPELSLLIQNKGTSLLSLKISAPDYVH 658
            +KE  R EECD S+ C DE NKLVACLRVPG+ESP+LSLLIQNKG   LS+ ISAPD+VH
Sbjct: 59   RKEGPRVEECDQSNKCTDEENKLVACLRVPGNESPDLSLLIQNKGKGSLSVTISAPDFVH 118

Query: 659  LETNTVHLQQNEDKKVKVSIGKESKDTFIVLTAKDRNCSINFKDLIPHNSGKKTDHTAKS 838
            LE   + L++ EDKKVKVSI     +  IVL A +  C ++ KD I H  GK+ D + KS
Sbjct: 119  LEKTKIQLKEKEDKKVKVSITSRGSENLIVLRAGNGQCKLDIKDTIAHYFGKEFDKSHKS 178

Query: 839  A-FVDIVTKVPSIVFLSIAAVILVASSWMCVRFRSKHLTGEGTKYQKLETELPVTSAGKK 1015
               ++ +++  +IV LS AA++++AS WMC+ FR KH +   +KYQ+LE ELPV+  GK 
Sbjct: 179  TDIINFMSRTSTIVVLSFAALLILASGWMCISFRRKHPSNNTSKYQRLEMELPVSGEGKT 238

Query: 1016 ETDVTGKKETXXXXXXXXXXXXXXXXXXXXXEEAPRTPSMPITPSLSSKGLASRRLSKDA 1195
            E++     +                      EEAP+ PS+P+TPSLSSKGLASRRLSK+A
Sbjct: 239  ESETNDGWDN-------------SWGDDWDDEEAPKAPSLPVTPSLSSKGLASRRLSKEA 285

Query: 1196 WKD 1204
            WKD
Sbjct: 286  WKD 288


>ref|XP_002299479.1| predicted protein [Populus trichocarpa] gi|222846737|gb|EEE84284.1|
            predicted protein [Populus trichocarpa]
          Length = 373

 Score =  244 bits (624), Expect = 3e-62
 Identities = 148/357 (41%), Positives = 198/357 (55%), Gaps = 12/357 (3%)
 Frame = +2

Query: 170  VDPKSRNEQN-------NTLTSKETLXXXXXXXXXXXXEDKKKNVHGTDNLSKDPDS--K 322
            +DPKS    N       + L S  T             + K+      +N+  D  S  K
Sbjct: 34   LDPKSDATTNASKEAGGSNLKSNSTEDDKGKGKGGQVDKSKEDKADDLNNIKMDSQSGSK 93

Query: 323  EVPKVGTGKDDSSKKPHVKDG--NKKEGTDDGSGSKMVPTGLTTEGNSVATKPTKKESVR 496
            +       K +SS++   K+G  NKK+G   G  SK  P     E N      ++KE   
Sbjct: 94   DNENAKEDKGNSSEEFQAKEGDHNKKKGLSGGEESKDFPE----EKNDERDTQSRKEGPH 149

Query: 497  GEECDSSSTCKDEINKLVACLRVPGDESPELSLLIQNKGTSLLSLKISAPDYVHLETNTV 676
             EECD S+ C DE NKLVACLRVPG+ESP+LSLLIQNKG   L++ ISAPD+VHLE   +
Sbjct: 150  VEECDPSNKCTDEENKLVACLRVPGNESPDLSLLIQNKGKGPLNVTISAPDFVHLEKTKI 209

Query: 677  HLQQNEDKKVKVSIGKESKDTFIVLTAKDRNCSINFKDLIPHNSGKKTDHTAKSA-FVDI 853
             LQ+ ++KKVKVSI     +  IVLTA    C ++ KD I H  GK+   + +SA  ++ 
Sbjct: 210  QLQEKDNKKVKVSITGGGSENLIVLTAGKGQCKLDIKDTIAHYLGKELHKSHESADIINS 269

Query: 854  VTKVPSIVFLSIAAVILVASSWMCVRFRSKHLTGEGTKYQKLETELPVTSAGKKETDVTG 1033
            +++  +I  LS AA++++AS WMC+ FR KHL+    +YQ+LE ELPV+  GK E+    
Sbjct: 270  MSRTSTIAVLSFAALLILASGWMCISFRRKHLSYNNPRYQRLEMELPVSGGGKTESKTND 329

Query: 1034 KKETXXXXXXXXXXXXXXXXXXXXXEEAPRTPSMPITPSLSSKGLASRRLSKDAWKD 1204
              +                      EEAP+TPS+P+TPSLSSKGLASRRLSKD WKD
Sbjct: 330  GWDN-------------NWGDDWDDEEAPKTPSLPVTPSLSSKGLASRRLSKDGWKD 373


>ref|XP_004149749.1| PREDICTED: uncharacterized protein LOC101203513 [Cucumis sativus]
          Length = 376

 Score =  228 bits (581), Expect = 3e-57
 Identities = 129/308 (41%), Positives = 179/308 (58%), Gaps = 4/308 (1%)
 Frame = +2

Query: 293  DNLSKDPDSKEVPKVGTGK---DDSSKKPHVKDGNKKEGTD-DGSGSKMVPTGLTTEGNS 460
            D + KDP+S+ V K G  K   DD   +     G+K +G   D S SK          ++
Sbjct: 83   DKIKKDPESETVSKEGADKVKKDDGLGEEGRNKGDKVKGKPVDNSVSKDGSKSSGKGEST 142

Query: 461  VATKPTKKESVRGEECDSSSTCKDEINKLVACLRVPGDESPELSLLIQNKGTSLLSLKIS 640
            V++   + +   GE+CDSS+ C DE  KLVACLRVPG++SP+L LLIQNKG   L+ KIS
Sbjct: 143  VSSASKRNDGSSGEDCDSSNKCTDEAKKLVACLRVPGNDSPQLLLLIQNKGKGPLTAKIS 202

Query: 641  APDYVHLETNTVHLQQNEDKKVKVSIGKESKDTFIVLTAKDRNCSINFKDLIPHNSGKKT 820
            APD+VHLE + V LQ+ E+KKVKVSIG       IVLT+    CS++F+DL+ H++ K +
Sbjct: 203  APDFVHLEKSEVQLQERENKKVKVSIGDGGDGNTIVLTSGGGRCSLDFRDLVAHHNAKDS 262

Query: 821  DHTAKSAFVDIVTKVPSIVFLSIAAVILVASSWMCVRFRSKHLTGEGTKYQKLETELPVT 1000
            D+  KS++   +TK   I  L+   ++ +A+  + +  R K+     +KYQ+L+ ELPV+
Sbjct: 263  DNVPKSSWFSYLTKPHVIAILAFGVILTIAAVSVIISIRRKNFVSSNSKYQRLDMELPVS 322

Query: 1001 SAGKKETDVTGKKETXXXXXXXXXXXXXXXXXXXXXEEAPRTPSMPITPSLSSKGLASRR 1180
              GK   D     E                      +E P TPS+P+TPSLSSKGLASRR
Sbjct: 323  LGGKAVADNNDGWEN--------------SWDDNWDDETPHTPSLPVTPSLSSKGLASRR 368

Query: 1181 LSKDAWKD 1204
            L+KD WKD
Sbjct: 369  LNKDGWKD 376


>ref|XP_002509953.1| conserved hypothetical protein [Ricinus communis]
            gi|223549852|gb|EEF51340.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 372

 Score =  209 bits (533), Expect = 1e-51
 Identities = 122/312 (39%), Positives = 170/312 (54%)
 Frame = +2

Query: 269  KKKNVHGTDNLSKDPDSKEVPKVGTGKDDSSKKPHVKDGNKKEGTDDGSGSKMVPTGLTT 448
            K  N++G D  S+    K        +DD SKK  +   N     D G  SK        
Sbjct: 100  KTNNINGNDLNSQSESKKTDNSERKVEDDDSKKKTIPKENNINQGDSGLASK-------- 151

Query: 449  EGNSVATKPTKKESVRGEECDSSSTCKDEINKLVACLRVPGDESPELSLLIQNKGTSLLS 628
                             EECD S+ C DE N+LVACLRVPG++  + SLL+QNKG + L+
Sbjct: 152  -------------DSHVEECDPSNKCTDEENQLVACLRVPGND--QYSLLVQNKGKNPLT 196

Query: 629  LKISAPDYVHLETNTVHLQQNEDKKVKVSIGKESKDTFIVLTAKDRNCSINFKDLIPHNS 808
            + ISAPDYVH+E   + LQ  EDKKV VSI     D  IVL   +  C+++ K L+  N 
Sbjct: 197  VTISAPDYVHIEKTEIQLQSKEDKKVPVSIRHGGNDNLIVLRTGNGRCNLDIKHLVTENF 256

Query: 809  GKKTDHTAKSAFVDIVTKVPSIVFLSIAAVILVASSWMCVRFRSKHLTGEGTKYQKLETE 988
                D + KS +++ +++ P I  L+ AA++++A+ W C+ FR K L+  G+KYQ+L+ E
Sbjct: 257  ---LDISQKSGYINYMSRTPVIAVLAFAALLILAAGWTCISFRRKQLSSSGSKYQRLDME 313

Query: 989  LPVTSAGKKETDVTGKKETXXXXXXXXXXXXXXXXXXXXXEEAPRTPSMPITPSLSSKGL 1168
            LPV++  K E++     +                      EEAP+TPS+P+TPSLSSKGL
Sbjct: 314  LPVSTGEKAESEQNDGWDDKWGDDWDD-------------EEAPKTPSLPVTPSLSSKGL 360

Query: 1169 ASRRLSKDAWKD 1204
            ASRRLSK+ WKD
Sbjct: 361  ASRRLSKEGWKD 372


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