BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008632
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containi...   180   9e-44
emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]   179   2e-43
ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
emb|CBI20322.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containi...   173   1e-41

>ref|XP_003632962.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  180 bits (457), Expect = 9e-44
 Identities = 85/128 (66%), Positives = 103/128 (80%)
 Frame = +3

Query: 3   LNEMKENGVTPDNFSYRMCINSYGKRSSIDEMEKVLEEMENQSHISMDWNTYATIAHIYM 182
           L EMK++ V PDNFSYR+CINSYG +S I  ME VL+EME Q HI MDWNTYA  A+ Y+
Sbjct: 198 LTEMKQSNVYPDNFSYRICINSYGAQSDIQGMENVLKEMERQPHIVMDWNTYAVAANFYI 257

Query: 183 KVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVTRLWELKKTACKKIINM 362
           K GL DKA+  LKKSE+RL K+DG+GYN+LISL+AS+GNK EV RLW L+K+ACK+ IN 
Sbjct: 258 KAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINR 317

Query: 363 DYMTMLGS 386
           DY+TML S
Sbjct: 318 DYITMLES 325


>emb|CAN64166.1| hypothetical protein VITISV_006333 [Vitis vinifera]
          Length = 506

 Score =  179 bits (454), Expect = 2e-43
 Identities = 85/128 (66%), Positives = 103/128 (80%)
 Frame = +3

Query: 3   LNEMKENGVTPDNFSYRMCINSYGKRSSIDEMEKVLEEMENQSHISMDWNTYATIAHIYM 182
           L EMK++ V PDNFSYR+CINSY  +S I  MEKVL+EME Q HI MDWNTYA  A+ Y+
Sbjct: 198 LTEMKQSHVYPDNFSYRICINSYAAQSDIQGMEKVLKEMERQPHIVMDWNTYAVAANFYI 257

Query: 183 KVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVTRLWELKKTACKKIINM 362
           K GL DKA+  LKKSE+RL K+DG+GYN+LISL+AS+GNK EV RLW L+K+ACK+ IN 
Sbjct: 258 KAGLPDKAIEALKKSEERLDKRDGLGYNHLISLYASLGNKAEVLRLWSLEKSACKRNINR 317

Query: 363 DYMTMLGS 386
           DY+TML S
Sbjct: 318 DYITMLES 325


>ref|XP_002305141.1| predicted protein [Populus trichocarpa] gi|222848105|gb|EEE85652.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  176 bits (447), Expect = 1e-42
 Identities = 83/128 (64%), Positives = 102/128 (79%)
 Frame = +3

Query: 3   LNEMKENGVTPDNFSYRMCINSYGKRSSIDEMEKVLEEMENQSHISMDWNTYATIAHIYM 182
           LNEMKEN V PDNFSYR+CINS+G R  ++ MEK+L EME+Q  I MDWNTYA  A+ Y+
Sbjct: 188 LNEMKENNVLPDNFSYRLCINSFGARDDLEGMEKILNEMEHQPDIVMDWNTYAVAANFYI 247

Query: 183 KVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVTRLWELKKTACKKIINM 362
              LTDKA+ TLKKSE RL KKDG GYN+LISL+A +GNKTEV RLW+L+K+AC++ IN 
Sbjct: 248 IGDLTDKAIDTLKKSEARLDKKDGTGYNHLISLYAKLGNKTEVLRLWDLEKSACERHINK 307

Query: 363 DYMTMLGS 386
           DY+ M+ S
Sbjct: 308 DYIIMMES 315


>emb|CBI20322.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/128 (62%), Positives = 108/128 (84%)
 Frame = +3

Query: 3   LNEMKENGVTPDNFSYRMCINSYGKRSSIDEMEKVLEEMENQSHISMDWNTYATIAHIYM 182
           L+EM+ENG++PDNFSYR+CINSYG RS ++ MEK+LEEME++SHI +DW TY+ +A+ Y+
Sbjct: 196 LSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYI 255

Query: 183 KVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVTRLWELKKTACKKIINM 362
           K GL +KA+  LKK+E +L  KD +GYN+LISL+AS+G+K E+ RLWE +KTA KK+IN 
Sbjct: 256 KAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINR 314

Query: 363 DYMTMLGS 386
           DY+TMLGS
Sbjct: 315 DYITMLGS 322


>ref|XP_002282230.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21705,
           mitochondrial [Vitis vinifera]
          Length = 504

 Score =  173 bits (439), Expect = 1e-41
 Identities = 80/128 (62%), Positives = 108/128 (84%)
 Frame = +3

Query: 3   LNEMKENGVTPDNFSYRMCINSYGKRSSIDEMEKVLEEMENQSHISMDWNTYATIAHIYM 182
           L+EM+ENG++PDNFSYR+CINSYG RS ++ MEK+LEEME++SHI +DW TY+ +A+ Y+
Sbjct: 196 LSEMQENGISPDNFSYRLCINSYGARSDLNSMEKILEEMESKSHIHIDWMTYSMVANFYI 255

Query: 183 KVGLTDKAVATLKKSEKRLTKKDGVGYNYLISLFASIGNKTEVTRLWELKKTACKKIINM 362
           K GL +KA+  LKK+E +L  KD +GYN+LISL+AS+G+K E+ RLWE +KTA KK+IN 
Sbjct: 256 KAGLNEKALFFLKKAETKL-HKDPLGYNHLISLYASLGSKAEMMRLWERRKTASKKLINR 314

Query: 363 DYMTMLGS 386
           DY+TMLGS
Sbjct: 315 DYITMLGS 322