BLASTX nr result
ID: Coptis24_contig00008622
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008622 (494 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283770.1| PREDICTED: uncharacterized protein LOC100243... 77 6e-18 ref|XP_003544249.1| PREDICTED: uncharacterized protein LOC100786... 51 1e-06 >ref|XP_002283770.1| PREDICTED: uncharacterized protein LOC100243767 [Vitis vinifera] gi|302142075|emb|CBI19278.3| unnamed protein product [Vitis vinifera] Length = 347 Score = 77.4 bits (189), Expect(2) = 6e-18 Identities = 41/90 (45%), Positives = 47/90 (52%) Frame = +3 Query: 3 PNPGFGQGGIPYPYSGRGSGLQFSNRGCPGWGRGGSPSPNAXXXXXXXXXXXXXXXXXXX 182 P+PGF G P SGRG G F+N P GRGGS SPN+ Sbjct: 188 PSPGFRPVGSPSFRSGRGRGHWFNNSPSPVSGRGGSSSPNSGRGRSGWFGNSMSPGSGRG 247 Query: 183 XXXXXXFHGHVSARESPELFYNKSMLEDPW 272 FH HVSA++ PELFYNKSM+EDPW Sbjct: 248 RGRGLGFHAHVSAQDRPELFYNKSMVEDPW 277 Score = 38.1 bits (87), Expect(2) = 6e-18 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 9/49 (18%) Frame = +2 Query: 341 MLEDPWRFLKPVV--REITVSE-------ETSWLPKSISRKDIVPKAAT 460 M+EDPW+FLKPV+ RE + + SWLPKSI+ K AT Sbjct: 272 MVEDPWKFLKPVIWSREKALGKMGNASDSPKSWLPKSINMKKTRVSEAT 320 >ref|XP_003544249.1| PREDICTED: uncharacterized protein LOC100786030 [Glycine max] Length = 720 Score = 50.8 bits (120), Expect(2) = 1e-06 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 3/93 (3%) Frame = +3 Query: 3 PNPGFGQGGIPYPYSGRGSGLQFSNRGCPGWGRGGSPSPNAXXXXXXXXXXXXXXXXXXX 182 PNP G P P GRG G + N G P GRG PN Sbjct: 585 PNPSPGYRNSPSPGQGRGRGF-WRNTGSPVSGRGSGQGPN-------------------- 623 Query: 183 XXXXXXFHGHVSARES---PELFYNKSMLEDPW 272 FHGH S + P+ FYN+SM+EDPW Sbjct: 624 ------FHGHRSNENTARGPDRFYNRSMVEDPW 650 Score = 26.2 bits (56), Expect(2) = 1e-06 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 11/60 (18%) Frame = +2 Query: 341 MLEDPWRFLKPVVREITVS---------EETSWLPKSISRKDIVPKAATVFPSG--SIAE 487 M+EDPW L+P++ + W+ K+ S K AA+V S S+AE Sbjct: 645 MVEDPWEHLEPIIWKANDGYLNTSRIPLNSQPWISKATSTKGEGSSAASVKSSSEPSLAE 704