BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008617
         (4210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278531.2| PREDICTED: putative nuclear matrix constitue...   949   0.0  
emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]   942   0.0  
ref|XP_002329317.1| predicted protein [Populus trichocarpa] gi|2...   868   0.0  
ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase,...   868   0.0  
ref|XP_004169820.1| PREDICTED: LOW QUALITY PROTEIN: putative nuc...   836   0.0  

>ref|XP_002278531.2| PREDICTED: putative nuclear matrix constituent protein 1-like
            protein-like [Vitis vinifera]
          Length = 1213

 Score =  949 bits (2453), Expect = 0.0
 Identities = 575/1264 (45%), Positives = 771/1264 (60%), Gaps = 33/1264 (2%)
 Frame = -1

Query: 4099 MFTPQRKIWSDWTQTPQQTTXXXXXXXXXXXXXXXXXXXGVAFIEGPPPPLNSLSVGGVE 3920
            MFTPQRK W+  + TP+                       VAF++GPPPPL SLS   + 
Sbjct: 1    MFTPQRKAWTGLSLTPRSEAQKSGGGAVSNPVNGGKGKS-VAFVDGPPPPLGSLSGKAM- 58

Query: 3919 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWQRFREGGGLDDAGYEKKDREALLDR 3740
                                              W+R RE G LD+A  E+KDREAL+++
Sbjct: 59   -----------------------LTGIDGGDMEDWRRLREAGLLDEAAMERKDREALVEK 95

Query: 3739 VSKLENELFEYQYNMGLLLIEKKEWTSKFXXXXXXXXXXXXXXXXXXXAHLNAISEVEKR 3560
            VSKL+NELF+YQY+MGLLLIEKKEWTSK+                   AH  AISEVEKR
Sbjct: 96   VSKLQNELFDYQYSMGLLLIEKKEWTSKYEELSQALAEAQEILKREKSAHFIAISEVEKR 155

Query: 3559 EENFRKGLGVEKQCVADLEKALREMRTETAETKYNADSKMAKANALIANIEEKSLEVESK 3380
            EEN RK LGVE+QCVA+LEKAL E+  E ++ K ++++K++ ANAL+A IE++SLEVE K
Sbjct: 156  EENLRKALGVERQCVAELEKALGEIHAEHSQIKLSSETKLSDANALVAKIEKRSLEVEEK 215

Query: 3379 LHAADAKLAEASRKSSEMERNLKEVEARESSLRSERQSFTAERGMHEATLSKQREELREW 3200
            L AADAKLAEASRKSSE+ER L+EVEARES LR ER S  AER  HEAT  KQ+E+LREW
Sbjct: 216  LLAADAKLAEASRKSSELERKLQEVEARESVLRRERLSLNAEREAHEATFHKQKEDLREW 275

Query: 3199 ERTLQEREERLSEGRRILNQREKEANESDLSIKRKEKDLEEMQRKIETSNETLRMKEDDI 3020
            ER LQE EERL EGRRI+NQRE++ANE D ++K KE++LEE Q+KI+  +  +++KEDDI
Sbjct: 276  ERKLQEGEERLCEGRRIINQREEKANEIDRTLKLKERNLEEAQKKIDLDSLNVKVKEDDI 335

Query: 3019 NRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSIRERVGIQKLVDEHNAFLESKKHE 2840
            N RL +L  KE + E++R  LE+K  EL+ L+E LS RERV IQKL+DEH A L++KK E
Sbjct: 336  NNRLAELTVKEKQAESMRGILEVKEKELIVLQEKLSARERVEIQKLLDEHRAILDTKKQE 395

Query: 2839 FELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXXXXXXXXXX 2660
            FELEM+ KR  +DEE+RSK  +VE+KE E  HREEK+ KR                    
Sbjct: 396  FELEMEQKRNSVDEELRSKVHEVEQKEVEVLHREEKLGKREQALEKRLERVKEKEKELEA 455

Query: 2659 XXXXXXEMKKSIKVEEKNLEMVRTQKVIDEENLKNLIAELEKRKADIXXXXXXXXXXXXX 2480
                  E +KS+K EEK +E  + Q + D+E+L  L  ELEK +ADI             
Sbjct: 456  KLKTLKEKEKSLKAEEKRVEGEKKQMLADKESLHLLKDELEKIRADITEQELQIHEETER 515

Query: 2479 XRITEEQRAEHLRLKSHLKQDIENNKRHEELLLKERDNLKQDRENFEKEWEVLDEKRAEI 2300
             ++TEE+R+EH RL+  LKQ+I+  +  EE+L KER++LKQ+R  FEK+WE LDEKRA I
Sbjct: 516  LKVTEEERSEHHRLQLELKQEIDKCRHQEEMLQKEREDLKQERIMFEKDWEALDEKRAVI 575

Query: 2299 TKDLKQVSMEKESLEKMKHSEEERLKNEKLVTQDYVQRELEELRLNKESFEAMMDHERSV 2120
            TK+++++  EKE LEK+  SEEERLK EKL  ++++QRELE +R+ KESF A+M HE   
Sbjct: 576  TKEMREIGDEKEKLEKLHLSEEERLKKEKLAMEEHIQRELEAVRIEKESFAAIMKHE--- 632

Query: 2119 LSQKAQSEHEDMLRALQLQKMELEADMQNKREEMEKILSERERAFEEQKERDLSNINYLS 1940
                            QL+K +LE +MQN+++E++K L ERERAFEE++ER+L+NIN+L 
Sbjct: 633  ----------------QLRKRDLEIEMQNRQDEIQKRLQERERAFEEERERELNNINHLK 676

Query: 1939 EVAGREMEDMKLQRVKFEKEKQKLAADKEHLAGQQLDMRTDIDKLDVLIKNIRNQRAQ-- 1766
            EVA RE+E+MK +R + EKEKQ++  +K  L G QL+MR DID+L +L + +++QR Q  
Sbjct: 677  EVARREIEEMKTERRRIEKEKQEVLLNKRQLEGHQLEMRKDIDELGILSRKLKDQREQFI 736

Query: 1765 -----FKLFIEKYKSCKSCGETISDFIISDLNSLQDMEDFGALPSPRRAEHYLENMQGSL 1601
                 F  F++K+K+CK+CGE   +F+++DL  L +ME   A P P  A+ +L + QG++
Sbjct: 737  KERDRFLTFVDKHKTCKNCGEITREFVLNDL-QLPEME-VEAFPLPNLADEFLNSPQGNM 794

Query: 1600 PASVTPNTDESPLGSGSGFATSGGRVSWILKKCGPKISKILNLSPLTKSRDAVAEGLTDD 1421
             AS   N   S        + SGGR+S+ L+KC    +KI NLSP  KS     + L ++
Sbjct: 795  AASDGTNVKISTGEIDLVSSGSGGRMSF-LRKCA---TKIFNLSPSKKSEHVGVQVLREE 850

Query: 1420 SPQLIMQVETETSN--RLEGTEIAQD---PSFGIPSESFDDQRILLGESLRDVRAQSAQS 1256
            SP L +QV  E +    + G  IA+D   PSFGI ++SFD Q++     +R+V    AQS
Sbjct: 851  SPLLDLQVNLEKAEGPSIVGQSIAEDELEPSFGIANDSFDIQQLHSDSVMREVDGGHAQS 910

Query: 1255 IDEQFDIDSTSVLVPGDSQHSELKNGRAKRGKKRTAGVKRTHSVKDVVEDAKLFLGESLE 1076
            +D   ++ S     P DSQ SELK+GR K G+KR  GV RT SVK+VVEDAK FLGE+ E
Sbjct: 911  VDGVSNMGSKEQEGPEDSQQSELKSGRRKPGRKRRTGVHRTRSVKNVVEDAKAFLGETPE 970

Query: 1075 PKEGMQQNGNAEDSVYAN-EGRDDSGFADKRTVGAGRKRNHAHASRSTVSEQEVDENDTR 899
              E +  +    DS Y N EG  ++  A+K      RKR  A +SR T SEQ+  +++ R
Sbjct: 971  IPE-LNGDERPNDSTYTNEEGERETSHAEKAASTITRKRQRAPSSRITESEQDAADSEGR 1029

Query: 898  SESVTAGVRKKRRPNVALGLQTPGEKRYNLRRPRPLGTTAATQASSDFAKVKQKVAEGDL 719
            S+SVTAG R KRR  VA  +QTPGEKRYNLRR +  GT A  QAS++  K  +K  +G  
Sbjct: 1030 SDSVTAGGRGKRRQTVAPVVQTPGEKRYNLRRHKTAGTVATAQASANLPKRDEKGGDGGD 1089

Query: 718  DAKEESR--------------------HLGQVTAMKAVEEVHEFTSDRIERFDTVTENDG 599
            D   +++                     L  VT +K+V E+ E++ DR+ RF TV +  G
Sbjct: 1090 DNTLQTKANPKAASSPSLADSDNPKTTPLVHVTTLKSV-EIREYSPDRVVRFKTV-DIVG 1147

Query: 598  GIVCETKSTGNIESSDEVNETEDRTAGYVDEDGFESXXXXXXXXXXXXXXXXXXXEASIG 419
            G     +   N+E   E+      T GY DE+G  S                   +ASIG
Sbjct: 1148 GNNDSARLAENMELRQEIPGNPGDTPGYEDENGSMS---HEEDDNSDEDESEHPGDASIG 1204

Query: 418  KKLW 407
            KKLW
Sbjct: 1205 KKLW 1208


>emb|CAN74873.1| hypothetical protein VITISV_038920 [Vitis vinifera]
          Length = 1234

 Score =  942 bits (2435), Expect = 0.0
 Identities = 565/1228 (46%), Positives = 761/1228 (61%), Gaps = 37/1228 (3%)
 Frame = -1

Query: 3979 VAFIEGPPPPLNSLSVGGVEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWQRFRE 3800
            VAF++GPPPPL SLS   +                                   W+R RE
Sbjct: 58   VAFVDGPPPPLGSLSGKAM------------------------LTGIDGGDMEDWRRLRE 93

Query: 3799 GGGLDDAGYEKKDREALLDRVSKLENELFEYQYNMGLLLIEKKEWTSKFXXXXXXXXXXX 3620
             G LD+A  E+KDREAL+++VSKL+NELF+YQY+MGLLLIEKKEWTSK+           
Sbjct: 94   AGLLDEAAMERKDREALVEKVSKLQNELFDYQYSMGLLLIEKKEWTSKYEELSQALAEAQ 153

Query: 3619 XXXXXXXXAHLNAISEVEKREENFRKGLGVEKQCVADLEKALREMRTETAETKYNADSKM 3440
                    AH  AISEVEKREEN RK LGVE+QCVA+LEKAL E+  E ++ K ++++K+
Sbjct: 154  EILKREKSAHFIAISEVEKREENLRKALGVERQCVAELEKALGEIHAEHSQIKLSSETKL 213

Query: 3439 AKANALIANIEEKSLEVESKLHAADAKLAEASRKSSEMERNLKEVEARESSLRSERQSFT 3260
            + ANAL+A IE++SLEVE KL AADAKLAEASRKSSE+ER L+EVEARES LR ER S  
Sbjct: 214  SDANALVAKIEKRSLEVEEKLLAADAKLAEASRKSSELERKLQEVEARESVLRRERLSLN 273

Query: 3259 AERGMHEATLSKQREELREWERTLQEREERLSEGRRILNQREKEANESDLSIKRKEKDLE 3080
            AER  HEAT  KQ+E+LREWER LQE EERL EGRRI+NQRE++ANE D ++K KE++LE
Sbjct: 274  AEREAHEATFHKQKEDLREWERKLQEGEERLCEGRRIINQREEKANEIDRTLKLKERNLE 333

Query: 3079 EMQRKIETSNETLRMKEDDINRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSIRER 2900
            E Q+KI+  +  +++KEDDIN RL +L  KE + E++R  LE+K  EL+ L+E LS RER
Sbjct: 334  EAQKKIDLDSLNVKVKEDDINNRLAELTVKEKQAESMRGILEVKEKELIVLQEKLSARER 393

Query: 2899 VGIQKLVDEHNAFLESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKR 2720
            V IQKL+DEH A L++KK EFELEM+ KR  +DEE+RSK  +VE+KE E  HREEK+ KR
Sbjct: 394  VEIQKLLDEHRAILDTKKQEFELEMEQKRNSVDEELRSKVHEVEQKEVEVLHREEKLGKR 453

Query: 2719 XXXXXXXXXXXXXXXXXXXXXXXXXXEMKKSIKVEEKNLEMVRTQKVIDEENLKNLIAEL 2540
                                      E +KS+K EEK +E  + Q + D+E+L  L  EL
Sbjct: 454  EQALEKRLERVKEKEKELEAKLKTLKEKEKSLKAEEKRVEGEKKQMLADKESLHLLKDEL 513

Query: 2539 EKRKADIXXXXXXXXXXXXXXRITEEQRAEHLRLKSHLKQDIENNKRHEELLLKERDNLK 2360
            EK +ADI              ++TEE+R+EH RL+  LKQ+I+  +  EE+L KER++LK
Sbjct: 514  EKIRADITEQELQIHEETERLKVTEEERSEHHRLQLELKQEIDKCRHQEEMLQKEREDLK 573

Query: 2359 QDRENFEKEWEVLDEKRAEITKDLKQVSMEKESLEKMKHSEEERLKNEKLVTQDYVQREL 2180
            Q+R  FEK+WE LDEKRA ITK+++++  EKE LEK+  SEEERLK EKL  ++++QREL
Sbjct: 574  QERIMFEKDWEALDEKRAVITKEMREIGDEKEKLEKLHLSEEERLKKEKLAMEEHIQREL 633

Query: 2179 EELRLNKESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQNKREEMEKILSE 2000
            E +R+ KESF A+M HE+  LS+KAQ++H  MLR  +L+K +LE +MQN+++E++K L E
Sbjct: 634  EAVRIEKESFAAIMKHEQVTLSEKAQNDHSQMLRDFELRKRDLEIEMQNRQDEIQKRLQE 693

Query: 1999 RERAFEEQKERDLSNINYLSEVAGREMEDMKLQRVKFEKEKQKLAADKEHLAGQQLDMRT 1820
            RERAFEE++ER+L+NIN+L EVA RE+E+MK +R + EKEKQ++  +K  L G QL+MR 
Sbjct: 694  RERAFEEERERELNNINHLKEVARREIEEMKTERRRIEKEKQEVLLNKRQLEGHQLEMRK 753

Query: 1819 DIDKLDVLIKNIRNQRAQ-------FKLFIEKYKSCKSCGETISDFIISDLNSLQDMEDF 1661
            DID+L +L + +++QR Q       F  F++K+K+CK+CGE   +F+++DL  L +ME  
Sbjct: 754  DIDELGILSRKLKDQREQFIKERDRFLTFVDKHKTCKNCGEITREFVLNDL-QLPEME-V 811

Query: 1660 GALPSPRRAEHYLENMQGSLPASVTPN----TDESPLGSGSGFATSGGRVSWILKKCGPK 1493
             A P P  A+ +L + QG++ AS   N    T E  L S      SGGR+S+ L+KC   
Sbjct: 812  EAFPLPNLADEFLNSPQGNMAASDGTNVKIXTGEIDLVSSG----SGGRMSF-LRKCA-- 864

Query: 1492 ISKILNLSPLTKSRDAVAEGLTDDSPQLIMQVETETSN--RLEGTEIAQD---PSFGIPS 1328
             +KI NLSP  KS     + L ++SP L +QV  E +    + G  IA+D   PSFGI +
Sbjct: 865  -TKIFNLSPSKKSEHVGVQVLREESPLLDLQVNLEKAEGPSIVGQSIAEDELEPSFGIAN 923

Query: 1327 ESFDDQRILLGESLRDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKNGRAKRGKKRTA 1148
            +SFD Q++     +R+V    AQS+D   ++ S     P DSQ SELK+GR K G+KR  
Sbjct: 924  DSFDIQQLHSDSVMREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGRRKPGRKRRT 983

Query: 1147 GVKRTHSVKDVVEDAKLFLGESLEPKEGMQQNGNAEDSVYAN-EGRDDSGFADKRTVGAG 971
            GV RT SVK+V                 +  +    DS Y N EG  ++  A+K      
Sbjct: 984  GVHRTRSVKNV-----------------LNGDERPNDSTYTNEEGERETSHAEKAASTIT 1026

Query: 970  RKRNHAHASRSTVSEQEVDENDTRSESVTAGVRKKRRPNVALGLQTPGEKRYNLRRPRPL 791
            RKR  A +SR T SEQ+  +++ RS+SVTAG R KRR  VA  +QTPGEKRYNLRR +  
Sbjct: 1027 RKRQRAPSSRITESEQDAADSEGRSDSVTAGGRGKRRQTVAPVVQTPGEKRYNLRRHKTA 1086

Query: 790  GTTAATQASSDFAKVKQKVAEGDLDAKEESR--------------------HLGQVTAMK 671
            GT A  QAS++  K  +K  +G  D   +++                     L  VT +K
Sbjct: 1087 GTVATAQASANLPKRDEKGGDGGDDNTLQTKANPKAASSPSLADSDNPKTTPLVHVTTLK 1146

Query: 670  AVEEVHEFTSDRIERFDTVTENDGGIVCETKSTGNIESSDEVNETEDRTAGYVDEDGFES 491
            +V E+ E++ DR+ RF TV +  GG     +   N+E   E+      T GY DE+G  S
Sbjct: 1147 SV-EIREYSPDRVVRFKTV-DIVGGNNDSARLAENMELRQEIPGNPGDTPGYEDENGSMS 1204

Query: 490  XXXXXXXXXXXXXXXXXXXEASIGKKLW 407
                               +ASIGKKLW
Sbjct: 1205 ---HEEDDNSDEDESEHPGDASIGKKLW 1229


>ref|XP_002329317.1| predicted protein [Populus trichocarpa] gi|222870771|gb|EEF07902.1|
            predicted protein [Populus trichocarpa]
          Length = 1156

 Score =  868 bits (2243), Expect = 0.0
 Identities = 525/1137 (46%), Positives = 715/1137 (62%), Gaps = 18/1137 (1%)
 Frame = -1

Query: 3763 DREALLDRVSKLENELFEYQYNMGLLLIEKKEWTSKFXXXXXXXXXXXXXXXXXXXAHLN 3584
            D E L D+VSKLENELFEYQYNMGLLLIEKKEW SK                    AHL 
Sbjct: 53   DGEYLADKVSKLENELFEYQYNMGLLLIEKKEWGSKHEELMQAFAEATEAVKREQAAHLI 112

Query: 3583 AISEVEKREENFRKGLGVEKQCVADLEKALREMRTETAETKYNADSKMAKANALIANIEE 3404
            A+S+ EK+EEN R+ LGVEKQCV DLEKA+REMR+E A+ K+ ADSK+A+ANAL+ +IEE
Sbjct: 113  ALSDAEKQEENLRRALGVEKQCVLDLEKAVREMRSENADIKFTADSKLAEANALVMSIEE 172

Query: 3403 KSLEVESKLHAADAKLAEASRKSSEMERNLKEVEARESSLRSERQSFTAERGMHEATLSK 3224
            KSLEVE+KL AADAKLAE SRKSSE++R L +VE+RES+LR ER SF AE+ ++E T SK
Sbjct: 173  KSLEVEAKLRAADAKLAEVSRKSSEIQRKLLDVESRESALRRERLSFIAEKEVYETTFSK 232

Query: 3223 QREELREWERTLQEREERLSEGRRILNQREKEANESDLSIKRKEKDLEEMQRKIETSNET 3044
            QRE+L+EWE+ LQE EERLS+ +RI+NQRE+ ANE+D  +K+KEKDLEE Q+KIE +N  
Sbjct: 233  QREDLQEWEKKLQEGEERLSKSQRIINQREERANENDRILKQKEKDLEEAQKKIEDANSI 292

Query: 3043 LRMKEDDINRRLVDLVAKEG------EVEAIRKNLELKNTELLALEENLSIRERVGIQKL 2882
            L+ KEDDI+ RL +L  KE       E +A RK LE+K  EL  LEE L+ RERV I+KL
Sbjct: 293  LKRKEDDISNRLTNLTIKEKACFFFTEFDATRKKLEVKEVELRVLEEKLNERERVEIKKL 352

Query: 2881 VDEHNAFLESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXX 2702
             DEHNA L+ KKHEFELE + K+K LDE++++K +++EK+ETE NH+EEK  KR      
Sbjct: 353  TDEHNAILDVKKHEFELEAEQKKKSLDEDLKNKVIELEKRETEINHKEEKAAKREQALDK 412

Query: 2701 XXXXXXXXXXXXXXXXXXXXEMKKSIKVEEKNLEMVRTQKVIDEENLKNLIAELEKRKAD 2522
                                E +K+I+ E+KNLE  + Q    +EN  NL AELEK +A 
Sbjct: 413  KLEKCKEKENEFESKSKSLKEREKAIRSEQKNLEGEKNQLESAKENFLNLKAELEKTRAS 472

Query: 2521 IXXXXXXXXXXXXXXRITEEQRAEHLRLKSHLKQDIENNKRHEELLLKERDNLKQDRENF 2342
                           +++EE+R+E+ RL++ LK++I   +  EELLLKE D+LKQ + NF
Sbjct: 473  NEEQLLKIHEEKERLKVSEEERSEYARLQAELKEEINKCRLQEELLLKEADDLKQQKGNF 532

Query: 2341 EKEWEVLDEKRAEITKDLKQVSMEKESLEKMKHSEEERLKNEKLVTQDYVQRELEELRLN 2162
            E+EWE LDEKRAE  K+LK +  +KE  EK + SEEER++NE+  T++Y++RELE L++ 
Sbjct: 533  EREWEDLDEKRAEAEKELKSIHEQKEKFEKYRLSEEERIRNERKETENYIKRELEALQVA 592

Query: 2161 KESFEAMMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQNKREEMEKILSERERAFE 1982
            KESFEA M+HERSV+++KAQ+E   ML ++++QK ELE ++Q ++EEM+++L E+E+ FE
Sbjct: 593  KESFEANMEHERSVMAEKAQNERNQMLHSIEMQKTELENELQKRQEEMDRLLQEKEKLFE 652

Query: 1981 EQKERDLSNINYLSEVAGREMEDMKLQRVKFEKEKQKLAADKEHLAGQQLDMRTDIDKLD 1802
            E++ER+  NIN+L +VA REMEDMKL+R++ EKEKQ++   K HL  QQ++MR DIDKL 
Sbjct: 653  EEREREFKNINFLRDVARREMEDMKLERLRIEKEKQEVDEKKRHLQEQQIEMREDIDKLG 712

Query: 1801 VLIKNIRNQRAQ-------FKLFIEKYKSCKSCGETISDFIISDLNSLQDMEDFGALPSP 1643
             L + +++ R Q       F +F+E+ K CK+CGE  S+F++SDL S Q++E   ALP+ 
Sbjct: 713  NLSRKLKDHREQFIKEKERFIVFVEQNKGCKNCGELTSEFVLSDLISSQEIEKADALPTS 772

Query: 1642 RRAEHYLENMQGSLPASVTPNTDESPLGSGSGFATSGGRVSWILKKCGPKISKILNLSPL 1463
            +   +++    G+  AS   +++ SP       A S   VSW L+KC    SKIL  S  
Sbjct: 773  KLVNNHVTTDDGNPAASEKHDSEMSPT-----LAHSVSPVSW-LRKC---TSKILKFSAG 823

Query: 1462 TKSRDAVAEGLTDDSPQLIMQVET-ETSNRLEGTEIAQDPSFGIPSESFDDQRILLGESL 1286
             +   A  + LTD +P    QV   E S RL+ TE   + SF I ++S D QR+L   S+
Sbjct: 824  KRIEPAALQNLTDGTPLSGEQVNAEEMSKRLDFTENEPELSFAIVNDSLDAQRVLSDTSI 883

Query: 1285 RDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELKNG--RAKRGKKRTAGVKRTHSVKDVV 1112
            R+V A    SI++Q + + T+  +  DSQ S LK+     KRG+ R   V RT SVK+VV
Sbjct: 884  REVEAGHDLSINDQSNNNGTAPEIQEDSQPSGLKHDPQPRKRGRPR---VSRTRSVKEVV 940

Query: 1111 EDAKLFLGESLEPKEGMQQNGNAEDSVY-ANEGRDDSGFADKRTVGAGRKRNHAHASRST 935
            +DAK  LG +LE  E       AEDS +  +E RD+S  ADK      RKRN    S+ +
Sbjct: 941  QDAKALLGGALELNE-------AEDSGHLKSESRDESSLADKGGPRNARKRNRTQTSQIS 993

Query: 934  VSEQEVDENDTRSESVTAGVRKKRRPNVALGLQTPGEKRYNLRRPRPLGTTAAT-QASSD 758
            VS++  D+++  S+SVTAG R+KRR  V    QT G+ +YNLRR R LG    T +ASS+
Sbjct: 994  VSDRYGDDSEGHSDSVTAGDRRKRRQKVVPN-QTQGQTQYNLRR-RELGVAVVTVKASSN 1051

Query: 757  FAKVKQKVAEGDLDAKEESRHLGQVTAMKAVEEVHEFTSDRIERFDTVTENDGGIVCETK 578
                K+K  +G + + ++   L    A  A        S    R   + +   G     +
Sbjct: 1052 LNNEKEKEDDG-VSSPQDGNLLRSAPAASAGAASENGESMHFARCANIMDTLDGDGSARR 1110

Query: 577  STGNIESSDEVNETEDRTAGYVDEDGFESXXXXXXXXXXXXXXXXXXXEASIGKKLW 407
               N   S+E+N T +  AG  D+D  ES                   E SIGKKLW
Sbjct: 1111 MDENAALSEEINGTPE-GAGEYDDDEEES---------------LHPGEVSIGKKLW 1151


>ref|XP_002525969.1| DNA double-strand break repair rad50 ATPase, putative [Ricinus
            communis] gi|223534701|gb|EEF36393.1| DNA double-strand
            break repair rad50 ATPase, putative [Ricinus communis]
          Length = 1163

 Score =  868 bits (2242), Expect = 0.0
 Identities = 531/1139 (46%), Positives = 708/1139 (62%), Gaps = 20/1139 (1%)
 Frame = -1

Query: 3763 DREALLDRVSKLENELFEYQYNMGLLLIEKKEWTSKFXXXXXXXXXXXXXXXXXXXAHLN 3584
            D   L++++SKLENELF+YQYNMG+LLIEKKEWTSK+                   AHL 
Sbjct: 66   DDVGLVEKISKLENELFDYQYNMGILLIEKKEWTSKYEELKQAIREATDALKREQAAHLI 125

Query: 3583 AISEVEKREENFRKGLGVEKQCVADLEKALREMRTETAETKYNADSKMAKANALIANIEE 3404
            AIS+ E+REEN RK LGVEKQCV DLEKA+REMR+E AE K+ ADSK+A+ANALI ++EE
Sbjct: 126  AISDAERREENLRKALGVEKQCVLDLEKAVREMRSENAELKFTADSKLAEANALIISVEE 185

Query: 3403 KSLEVESKLHAADAKLAEASRKSSEMERNLKEVEARESSLRSERQSFTAERGMHEATLSK 3224
            KSLEVESKLHAADAKLAE SRKSSE++R  ++VE+RES+LR ER SF AE+  HE+TLS+
Sbjct: 186  KSLEVESKLHAADAKLAEVSRKSSEIDRKSQDVESRESALRRERISFIAEKEAHESTLSR 245

Query: 3223 QREELREWERTLQEREERLSEGRRILNQREKEANESDLSIKRKEKDLEEMQRKIETSNET 3044
            QRE+LREWER LQE EER+S+G+RI+NQRE+ ANE+D  +K+KEKDLEE Q+KI+ +   
Sbjct: 246  QREDLREWERKLQEGEERISKGQRIINQREERANENDRILKQKEKDLEEAQKKIDEAEVV 305

Query: 3043 LRMKEDDINRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSIRERVGIQKLVDEHNA 2864
            L+ KED++  RL +L  KE E +A  K LE+K  +L +LEE+L+ RE+V IQKL+DEH A
Sbjct: 306  LKNKEDEMTIRLANLTLKEKEFDATGKKLEMKEEKLRSLEESLNDREKVEIQKLIDEHTA 365

Query: 2863 FLESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXX 2684
             LE KK EFELE D KRK LDEE+++K  +VEKKE E  H E+K+ KR            
Sbjct: 366  ILEVKKREFELEADQKRKSLDEELKNKVNEVEKKEAEIKHMEDKVLKREQALDKKLDKLK 425

Query: 2683 XXXXXXXXXXXXXXEMKKSIKVEEKNLEMVRTQKVIDEENLKNLIAELEKRKADIXXXXX 2504
                          E +K+IK EEKNLE  + Q   D+EN  NL AELEK +A       
Sbjct: 426  EKEKEFESKSKALKEKEKTIKSEEKNLENEKRQLNSDKENFLNLKAELEKIRAANEEQLL 485

Query: 2503 XXXXXXXXXRITEEQRAEHLRLKSHLKQDIENNKRHEELLLKERDNLKQDRENFEKEWEV 2324
                     ++ EE+R E++RL+S LK++IE  +  E+L LKE ++LKQ +ENFE+EW+ 
Sbjct: 486  KIREEKDQLKVNEEERVEYVRLQSELKEEIEKCRLQEQLFLKEVEDLKQQKENFEREWDD 545

Query: 2323 LDEKRAEITKDLKQVSMEKESLEKMKHSEEERLKNEKLVTQDYVQRELEELRLNKESFEA 2144
            LDEKR EI K LK +S ++E  EK K SEEER+K+EK   +DYV RE E L + KESFEA
Sbjct: 546  LDEKRVEIEKQLKSISEQREKFEKQKASEEERIKHEKQNVEDYVIREREALEIAKESFEA 605

Query: 2143 MMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQNKREEMEKILSERERAFEEQKERD 1964
             M+HERS L++KA SE + ML   +LQK EL  D+Q K+E MEK+L E+E+ FEE+KER+
Sbjct: 606  NMEHERSALAEKALSERQQMLHEFELQKSELGNDLQIKQEGMEKVLQEKEKLFEEEKERE 665

Query: 1963 LSNINYLSEVAGREMEDMKLQRVKFEKEKQKLAADKEHLAGQQLDMRTDIDKLDVLIKNI 1784
            L NIN+L ++A REME+MK +R++ EKE+Q++  +K+HL  QQL+MR DIDKL  L K +
Sbjct: 666  LKNINFLRDLARREMEEMKFERLRIEKERQEIEENKKHLQEQQLEMRDDIDKLGDLSKKL 725

Query: 1783 RNQRAQFK-------LFIEKYKSCKSCGETISDFIISDLNSLQDMEDFGALPSPRRAEHY 1625
            ++ R QF        LF+E++KSCK+CGE  S+F++SDL S Q++E    LP+    +  
Sbjct: 726  KDHREQFVKEKERFILFVEQHKSCKNCGEITSEFVLSDLISSQEIEKAVLLPNQGLIQSA 785

Query: 1624 LENMQGSLPASVTPNTDESPLGSGSGFATSGGRVSWILKKCGPKISKILNLSPLTKSRDA 1445
              N   +L A+   + D SP         S   VSW L+KC    SKI + SP  K   A
Sbjct: 786  TGNCNQNLAATAVQDNDISP-----SAGRSASPVSW-LRKC---TSKIFSFSPGNKMEPA 836

Query: 1444 VAEGLTDDSPQLIMQVETETSNRLEGTEIAQDPSFGIPSESFDDQRILLGESLRDVRAQS 1265
              + LT     L+ +   E S RL+ T    + SF I ++S D QRI    S+R+  A  
Sbjct: 837  AVQNLT---APLLAEDREEPSKRLDFTAHEPELSFTIGNDSLDVQRIQSDSSIREAEAVQ 893

Query: 1264 AQSIDEQFDIDSTSVLVPGDSQHSELKNGRA--KRGKKRTAGVKRTHSVKDVVEDAKLFL 1091
              SID++ +I++ ++ VP  +Q S +K GR   KRG+ R   V RT S+K VV+DAK  L
Sbjct: 894  DFSIDDKSNINNEAIQVPEGTQPSNVKLGRQIHKRGRPR---VSRTRSMKAVVQDAKAIL 950

Query: 1090 GESLEPKEGMQQNGNAEDSVYAN-EGRDDSGFADKRTVGAGRKRNHAHASRSTVSEQ--- 923
            GESLE       N   EDS +   E R +S  AD++     RKR    AS++TVSE    
Sbjct: 951  GESLE------LNTETEDSSHLKAESRGESNLADEKISRNARKRKSTRASQNTVSEHGDG 1004

Query: 922  EVDENDTRSESVTAGVRKKRRPNVALGLQTPGEKRYNLRRPRPLGTTAATQASSDFAKVK 743
            + DE++  S+S+TAG R+KR+  VA+ +QTPGEKRYNLRRP+               K  
Sbjct: 1005 DGDESEGHSDSITAGKRRKRQQKVAI-VQTPGEKRYNLRRPK---------------KGA 1048

Query: 742  QKVAEGDLDAKEESRHLGQVTAMKAVEEVHEFTSDRIERFDTVTENDGGIVCETKSTGNI 563
            + +++   + KEE    G  +   A E      + R E+ + V++ D        ST N+
Sbjct: 1049 KPLSDIGREDKEEGGVRGPTSTGIASE---NGGNARFEQLEVVSDTD------ADSTRNL 1099

Query: 562  ES----SDEVNETEDRTA--GYVDEDGFES-XXXXXXXXXXXXXXXXXXXEASIGKKLW 407
                  S+EVN T D     G  +E   ES                    EASIGKKLW
Sbjct: 1100 VEYAALSEEVNGTPDEGGEFGVAEEYRSESHRGDEDDEEDEDEDESVHPGEASIGKKLW 1158


>ref|XP_004169820.1| PREDICTED: LOW QUALITY PROTEIN: putative nuclear matrix constituent
            protein 1-like protein-like [Cucumis sativus]
          Length = 1204

 Score =  836 bits (2159), Expect = 0.0
 Identities = 504/1143 (44%), Positives = 704/1143 (61%), Gaps = 24/1143 (2%)
 Frame = -1

Query: 3763 DREALLDRVSKLENELFEYQYNMGLLLIEKKEWTSKFXXXXXXXXXXXXXXXXXXXAHLN 3584
            D+E L +++S+LENELFEYQYNMGLLLIEKK+WT K+                   AH+ 
Sbjct: 80   DQEGLAEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELKQALAETKDTLKREQMAHMI 139

Query: 3583 AISEVEKREENFRKGLGVEKQCVADLEKALREMRTETAETKYNADSKMAKANALIANIEE 3404
            AIS+ EK+EEN +K LGVEK+CV DLEKALREMR E AE K+  DSK+A+ANAL+ +IEE
Sbjct: 140  AISDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSKLAEANALVTSIEE 199

Query: 3403 KSLEVESKLHAADAKLAEASRKSSEMERNLKEVEARESSLRSERQSFTAERGMHEATLSK 3224
            KSLEVE++L AADAKLAE SRK+SE+ER L+++EARE +LR +R SF AER  HEATLSK
Sbjct: 200  KSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSFNAERESHEATLSK 259

Query: 3223 QREELREWERTLQEREERLSEGRRILNQREKEANESDLSIKRKEKDLEEMQRKIETSNET 3044
            QR++LREWER LQ+ EERL++G+ ILNQRE+ ANESD  +K+KEKDLEE+Q+KI++SN  
Sbjct: 260  QRDDLREWERKLQDAEERLAKGQTILNQREERANESDRMVKQKEKDLEELQKKIDSSNLA 319

Query: 3043 LRMKEDDINRRLVDLVAKEGEVEAIRKNLELKNTELLALEENLSIRERVGIQKLVDEHNA 2864
            L+ KE+DI  RL ++        A+++  ++K  ELL LEE LS RE+V IQKL+DEHNA
Sbjct: 320  LKRKEEDIGTRLANI--------ALKEQAKIKEKELLVLEEKLSAREKVEIQKLLDEHNA 371

Query: 2863 FLESKKHEFELEMDLKRKGLDEEMRSKELKVEKKETENNHREEKINKRXXXXXXXXXXXX 2684
             L++KK EFELE+D KRK LDEE++SK  +VEKKE E  H EEK+ KR            
Sbjct: 372  ILDAKKIEFELEIDQKRKSLDEELKSKVSEVEKKEAEIKHMEEKVGKREQALEKRTEKFK 431

Query: 2683 XXXXXXXXXXXXXXEMKKSIKVEEKNLEMVRTQKVIDEENLKNLIAELEKRKADIXXXXX 2504
                          + +KS+K+EEKNLE  + Q + D E L +L AE+EK +A+      
Sbjct: 432  EKEGDYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEELISLKAEVEKIRAENEAQLL 491

Query: 2503 XXXXXXXXXRITEEQRAEHLRLKSHLKQDIENNKRHEELLLKERDNLKQDRENFEKEWEV 2324
                     +++E +R++ LRL+S LKQ+IE  ++ +ELLLKE ++LKQ +E FE+EWE 
Sbjct: 492  KLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLLKEAEDLKQQKETFEREWEE 551

Query: 2323 LDEKRAEITKDLKQVSMEKESLEKMKHSEEERLKNEKLVTQDYVQRELEELRLNKESFEA 2144
            LDEKRA++ K+ K + ++KE  EK   SEEERLK+E+L T+ Y+ RE E L+L +ESF A
Sbjct: 552  LDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKSERLETEAYIHREQENLKLAQESFAA 611

Query: 2143 MMDHERSVLSQKAQSEHEDMLRALQLQKMELEADMQNKREEMEKILSERERAFEEQKERD 1964
             M+HE+S +++KAQS+   M+    LQK ELE+ MQN+ EEME+   E+++ F+E+KER+
Sbjct: 612  SMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEEMERGFREKDKLFKEEKERE 671

Query: 1963 LSNINYLSEVAGREMEDMKLQRVKFEKEKQKLAADKEHLAGQQLDMRTDIDKLDVLIKNI 1784
            L NI +L +VA REM+++KL+R+K EKE+Q+  A+KEHL  Q++++R DI++L  L   +
Sbjct: 672  LENIKFLRDVARREMDELKLERLKTEKERQEAEANKEHLERQRIEIRKDIEELLELSNKL 731

Query: 1783 RNQRA-------QFKLFIEKYKSCKSCGETISDFIISDLNSLQDMEDFGALPSPRRAEHY 1625
            ++QR        +F  +++K+ +CK+CGE  S+F++SDL  L   E+   L  P   + Y
Sbjct: 732  KDQRERLVAERDRFISYVDKHVTCKNCGEIASEFVLSDLQYLDGFENADVLNLPGLPDKY 791

Query: 1624 LE------NMQGSLPASVTPNTDESPLGSGSGFATSGGRVSWILKKCGPKISKILNLSPL 1463
            +E      +  G+L  S   N + +P G+G     S G +SW L+KC    SKI   SP 
Sbjct: 792  MEIQGLQVSPGGNLGISDVKNGELTPGGAGQKSPISAGTISW-LRKC---TSKIFKFSPG 847

Query: 1462 TKSRDAVAEGLTDDSPQLIMQVE-TETSNRLEGTEIAQDPSFGIPSESFDDQRILLGESL 1286
             K      E   D++P      +  E S R+   E   + S  I S+S DD+RI    S 
Sbjct: 848  KKIVSPAFEKQDDEAPVSDEHDDLAEPSKRMSVGEDEVELSLAIASDSLDDRRIQSDVSG 907

Query: 1285 RDVRAQSAQSIDEQFDIDSTSVLVPGDSQHSELK--NGRAKRGKKRTAGVKRTHSVKDVV 1112
            RDV      SID Q +I S +  V  DSQ S+++    R KRGK +   + RT SVK VV
Sbjct: 908  RDVEPSQNLSIDNQSNIVSKAPEVAVDSQPSDVREIKXRPKRGKPK---INRTRSVKAVV 964

Query: 1111 EDAKLFLGESLEPKEGMQQNGNAEDSVYA-NEGRDDSGFADKRTVGAGRKRNHAHASRST 935
            EDAK  +GE    ++    NGNAEDS    NE RD+S  A K T    RKR  A++S+  
Sbjct: 965  EDAKAIIGELQPTQQAEYPNGNAEDSSQLNNESRDESSLAGKGTQRNLRKRTRANSSQ-I 1023

Query: 934  VSEQEVDENDTRSESVTAGVRKKRRPNVALGLQTPGEKRYNLRRPRPLGTTAATQASSDF 755
            + E + D+++ RS SV  G  +KRR   A  ++ P EKRYNLRR        A++  S+ 
Sbjct: 1024 MGENDHDDSEVRSGSVVEGQPRKRRQRAAPAVRAP-EKRYNLRRK----VVGASKEPSNI 1078

Query: 754  AKVKQKVAEGDLDAKEESRHLGQVTAMKAVEEVHEFT-SDRIERFDTVTEN-DGGIVCET 581
            +K  ++V  G ++ +EE  H  +V    ++    +   S  + R  TV +N D G+   +
Sbjct: 1079 SKEHEEV--GTVNRREEDVHYSKVRPTPSMGVASDNAGSAHLVRCGTVQDNQDDGVAGTS 1136

Query: 580  K-STGNIESSDEVNETEDRTAGYVDEDGFES----XXXXXXXXXXXXXXXXXXXEASIGK 416
            K S   +  S+EVN + +    Y D   + S                       E SIGK
Sbjct: 1137 KISIDMVSQSEEVNGSPENAGKYEDHGEYRSESCEEVGNEDDDDDEEEESAHPGEVSIGK 1196

Query: 415  KLW 407
            KLW
Sbjct: 1197 KLW 1199