BLASTX nr result

ID: Coptis24_contig00008616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008616
         (1419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinif...   669   0.0  
ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sat...   655   0.0  
ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sat...   654   0.0  
ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]     652   0.0  
ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]     652   0.0  

>ref|XP_002282330.1| PREDICTED: protein CLP1 homolog [Vitis vinifera]
            gi|296087785|emb|CBI35041.3| unnamed protein product
            [Vitis vinifera]
          Length = 427

 Score =  669 bits (1727), Expect = 0.0
 Identities = 323/376 (85%), Positives = 361/376 (96%), Gaps = 1/376 (0%)
 Frame = +2

Query: 293  IRKINIEKECELRIEVAES-PVKLRLLSGTAEIYGTELPPEIWLTIPPHLKFAVFTWYGA 469
            IR++ +EKECELR+EV+E+ P++LRLL+GTAEI+GTE+PPEIWL+ PP LKFAVFTWYGA
Sbjct: 7    IRQVKLEKECELRVEVSENAPLRLRLLNGTAEIFGTEIPPEIWLSFPPRLKFAVFTWYGA 66

Query: 470  TVELDGMTETDYTADETPMISYVNVHAVLEGRRNRAKASPTHDSDASQGPRVIVVGPTDS 649
            T+E+DG+TETDYTADETPMISYVNVHAVLEGRRNRAKAS + D++ASQGPRVIVVGP DS
Sbjct: 67   TIEMDGITETDYTADETPMISYVNVHAVLEGRRNRAKASSSGDAEASQGPRVIVVGPVDS 126

Query: 650  GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLV 829
            GKSTLSRMLLSW+AKQGWKPTFVDLDIGQGSIT+PGC+AATPIEMPIDPV+GIPLEMPLV
Sbjct: 127  GKSTLSRMLLSWSAKQGWKPTFVDLDIGQGSITIPGCIAATPIEMPIDPVDGIPLEMPLV 186

Query: 830  YFYGHTTPSVNADLYKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHA 1009
            YFYGHTTPSVN +LYKV+VKEL+RTLERQF+GN ESRAAGMVINTMGWIEGVGYEL+LHA
Sbjct: 187  YFYGHTTPSVNVELYKVLVKELARTLERQFSGNAESRAAGMVINTMGWIEGVGYELILHA 246

Query: 1010 IDTFNADVVLVIGQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIRE 1189
            IDTFNA+VVLV GQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSR AK RQKARSYRIRE
Sbjct: 247  IDTFNANVVLVSGQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRGAKFRQKARSYRIRE 306

Query: 1190 YFYGLTNDLSPHSNIVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLL 1369
            YFYGL+NDL+P+SN+ +F+DLFVYR+GGGPQAPRSALPIGAEPAADP+RLV VNINRD+L
Sbjct: 307  YFYGLSNDLAPYSNVSNFTDLFVYRIGGGPQAPRSALPIGAEPAADPLRLVRVNINRDML 366

Query: 1370 HLVLAVSFAKEPDQII 1417
            HLVLAVSFAKE DQI+
Sbjct: 367  HLVLAVSFAKEADQIV 382


>ref|XP_004148687.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score =  655 bits (1691), Expect = 0.0
 Identities = 320/377 (84%), Positives = 353/377 (93%), Gaps = 1/377 (0%)
 Frame = +2

Query: 290  NIRKINIEKECELRIEV-AESPVKLRLLSGTAEIYGTELPPEIWLTIPPHLKFAVFTWYG 466
            +IR++ +++E ELRIEV ++SP++LRLLSG AEI+GTELPPEIWLT+PP LK AVFTWYG
Sbjct: 17   SIRQVKLDRESELRIEVGSDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYG 76

Query: 467  ATVELDGMTETDYTADETPMISYVNVHAVLEGRRNRAKASPTHDSDASQGPRVIVVGPTD 646
            AT+E+DG TETDYTADETPMI YVNVHA+LE RR+RA+AS + D  ++QGPRVIVVGPTD
Sbjct: 77   ATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSSDDPGSTQGPRVIVVGPTD 136

Query: 647  SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPL 826
            SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSIT+PGC+AATPIE+PIDPVEGIPLEMPL
Sbjct: 137  SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPL 196

Query: 827  VYFYGHTTPSVNADLYKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLH 1006
            VYFYGHTTPS N DLYKV+VKEL++ LERQFTGN ESRAAGMVINTMGWIEGVGYELLLH
Sbjct: 197  VYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLH 256

Query: 1007 AIDTFNADVVLVIGQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIR 1186
            AIDT NA+VVLV+GQEKL SMLKDVLKNKPNVDVVKLQKSGGVVSRNAK RQKARSYRIR
Sbjct: 257  AIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIR 316

Query: 1187 EYFYGLTNDLSPHSNIVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDL 1366
            EYFYG  NDLSPHSNI +FSDLF+YR+GGGPQAPRSALPIGAEPAADP RLVPVNINRDL
Sbjct: 317  EYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDL 376

Query: 1367 LHLVLAVSFAKEPDQII 1417
            LHLVLAVSFAKEP++II
Sbjct: 377  LHLVLAVSFAKEPEEII 393


>ref|XP_004171489.1| PREDICTED: protein CLP1 homolog [Cucumis sativus]
          Length = 438

 Score =  654 bits (1687), Expect = 0.0
 Identities = 319/377 (84%), Positives = 352/377 (93%), Gaps = 1/377 (0%)
 Frame = +2

Query: 290  NIRKINIEKECELRIEV-AESPVKLRLLSGTAEIYGTELPPEIWLTIPPHLKFAVFTWYG 466
            +IR++ +++E E RIEV ++SP++LRLLSG AEI+GTELPPEIWLT+PP LK AVFTWYG
Sbjct: 17   SIRQVKLDRESEFRIEVGSDSPLRLRLLSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYG 76

Query: 467  ATVELDGMTETDYTADETPMISYVNVHAVLEGRRNRAKASPTHDSDASQGPRVIVVGPTD 646
            AT+E+DG TETDYTADETPMI YVNVHA+LE RR+RA+AS + D  ++QGPRVIVVGPTD
Sbjct: 77   ATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSSDDPGSTQGPRVIVVGPTD 136

Query: 647  SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPL 826
            SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSIT+PGC+AATPIE+PIDPVEGIPLEMPL
Sbjct: 137  SGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVEGIPLEMPL 196

Query: 827  VYFYGHTTPSVNADLYKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLH 1006
            VYFYGHTTPS N DLYKV+VKEL++ LERQFTGN ESRAAGMVINTMGWIEGVGYELLLH
Sbjct: 197  VYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVINTMGWIEGVGYELLLH 256

Query: 1007 AIDTFNADVVLVIGQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIR 1186
            AIDT NA+VVLV+GQEKL SMLKDVLKNKPNVDVVKLQKSGGVVSRNAK RQKARSYRIR
Sbjct: 257  AIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIR 316

Query: 1187 EYFYGLTNDLSPHSNIVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDL 1366
            EYFYG  NDLSPHSNI +FSDLF+YR+GGGPQAPRSALPIGAEPAADP RLVPVNINRDL
Sbjct: 317  EYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDL 376

Query: 1367 LHLVLAVSFAKEPDQII 1417
            LHLVLAVSFAKEP++II
Sbjct: 377  LHLVLAVSFAKEPEEII 393


>ref|XP_003536785.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 432

 Score =  652 bits (1683), Expect = 0.0
 Identities = 318/376 (84%), Positives = 352/376 (93%), Gaps = 1/376 (0%)
 Frame = +2

Query: 293  IRKINIEKECELRIEVA-ESPVKLRLLSGTAEIYGTELPPEIWLTIPPHLKFAVFTWYGA 469
            I+++ +E+E ELRIEV  ++P++LRLL+GTAEI+GTELPPEIWL  PP LKFAVFTWYGA
Sbjct: 12   IKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKFAVFTWYGA 71

Query: 470  TVELDGMTETDYTADETPMISYVNVHAVLEGRRNRAKASPTHDSDASQGPRVIVVGPTDS 649
            T+E+DG TETDYTADETPM+SYVNVHAVL+GRR+RAKAS   DS +SQGPRVIVVGPTDS
Sbjct: 72   TIEMDGATETDYTADETPMVSYVNVHAVLDGRRSRAKASSPDDSVSSQGPRVIVVGPTDS 131

Query: 650  GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLV 829
            GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSIT+PGC+AATPIEMPIDPVEGIPLEMPLV
Sbjct: 132  GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIEMPIDPVEGIPLEMPLV 191

Query: 830  YFYGHTTPSVNADLYKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHA 1009
            YFYGH TPS N +LYKV+VKEL+  +ERQFTGN ESRA+GMVINTMGWIEGVGY+LLLHA
Sbjct: 192  YFYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGMVINTMGWIEGVGYDLLLHA 251

Query: 1010 IDTFNADVVLVIGQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIRE 1189
            I TF A+VVLV+GQEKLCSMLKDVLK++P VDVVKLQ+SGGVVSRNAK RQKARSYRIRE
Sbjct: 252  IRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVVSRNAKVRQKARSYRIRE 311

Query: 1190 YFYGLTNDLSPHSNIVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLL 1369
            YFYGL+NDLSPHSNI +FSDLFVYRVGGGPQAPRSALPIGAEPAADP R+VPVNINRDLL
Sbjct: 312  YFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEPAADPTRVVPVNINRDLL 371

Query: 1370 HLVLAVSFAKEPDQII 1417
            HLVLAVSFAKEPD+II
Sbjct: 372  HLVLAVSFAKEPDEII 387


>ref|XP_003556550.1| PREDICTED: protein CLP1 homolog [Glycine max]
          Length = 438

 Score =  652 bits (1682), Expect = 0.0
 Identities = 317/376 (84%), Positives = 352/376 (93%), Gaps = 1/376 (0%)
 Frame = +2

Query: 293  IRKINIEKECELRIEVA-ESPVKLRLLSGTAEIYGTELPPEIWLTIPPHLKFAVFTWYGA 469
            I+++ +E+E ELRIEV  ++P++LRLL+GTAEI+GTELPPEIWL  PP LKFAVFTWYGA
Sbjct: 18   IKQVKLERESELRIEVGNDAPLRLRLLNGTAEIFGTELPPEIWLNFPPRLKFAVFTWYGA 77

Query: 470  TVELDGMTETDYTADETPMISYVNVHAVLEGRRNRAKASPTHDSDASQGPRVIVVGPTDS 649
            T+E+DG TETDYTADETPM+SYVNVHAVL+GRR+RAKAS   DS +SQGPRVIVVGPTDS
Sbjct: 78   TIEMDGATETDYTADETPMVSYVNVHAVLDGRRSRAKASSPDDSGSSQGPRVIVVGPTDS 137

Query: 650  GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITVPGCVAATPIEMPIDPVEGIPLEMPLV 829
            GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSIT+PGC+AATPIEMPIDPVEGIPLEMPLV
Sbjct: 138  GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIEMPIDPVEGIPLEMPLV 197

Query: 830  YFYGHTTPSVNADLYKVIVKELSRTLERQFTGNVESRAAGMVINTMGWIEGVGYELLLHA 1009
            Y+YGH TPS N +LYKV+VKEL+  +ERQFTGN ESRA+GMVINTMGWIEGVGY+LLLHA
Sbjct: 198  YYYGHATPSNNVELYKVLVKELAGMIERQFTGNAESRASGMVINTMGWIEGVGYDLLLHA 257

Query: 1010 IDTFNADVVLVIGQEKLCSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKARQKARSYRIRE 1189
            I TF A+VVLV+GQEKLCSMLKDVLK++P VDVVKLQ+SGGVVSRNAK RQKARSYRIRE
Sbjct: 258  IRTFKANVVLVLGQEKLCSMLKDVLKSEPKVDVVKLQRSGGVVSRNAKVRQKARSYRIRE 317

Query: 1190 YFYGLTNDLSPHSNIVSFSDLFVYRVGGGPQAPRSALPIGAEPAADPMRLVPVNINRDLL 1369
            YFYGL+NDLSPHSNI +FSDLFVYRVGGGPQAPRSALPIGAEPAADP R+VPVNINRDLL
Sbjct: 318  YFYGLSNDLSPHSNIANFSDLFVYRVGGGPQAPRSALPIGAEPAADPTRVVPVNINRDLL 377

Query: 1370 HLVLAVSFAKEPDQII 1417
            HLVLAVSFAKEPD+II
Sbjct: 378  HLVLAVSFAKEPDEII 393


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