BLASTX nr result

ID: Coptis24_contig00008614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008614
         (3175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637756.1| hypothetical protein MTR_101s0024 [Medicago ...   181   1e-42
emb|CBI27158.3| unnamed protein product [Vitis vinifera]              176   3e-41
ref|NP_181059.1| DCD (Development and Cell Death) domain protein...   159   3e-36
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223...   158   1e-35
ref|XP_002879533.1| hypothetical protein ARALYDRAFT_482479 [Arab...   157   2e-35

>ref|XP_003637756.1| hypothetical protein MTR_101s0024 [Medicago truncatula]
            gi|355503691|gb|AES84894.1| hypothetical protein
            MTR_101s0024 [Medicago truncatula]
          Length = 558

 Score =  181 bits (458), Expect = 1e-42
 Identities = 85/135 (62%), Positives = 109/135 (80%)
 Frame = -2

Query: 3120 GAIFMASRSTKRECLKRNLFGLPPSQHNFVKKVKSGMVLFLFEYEERKLFGVFQASSDGD 2941
            GAIFM++RST +EC +R+LFGLP S  +FVK VK+GM+LFLFE+EERKL GVF+A +DG 
Sbjct: 123  GAIFMSNRSTLKECFERSLFGLPGSFSDFVKNVKAGMILFLFEFEERKLHGVFEAITDGG 182

Query: 2940 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLSRYQVSD 2761
            MNI PHA++SSG+QFP+QV+F  I  C+PL E +FC AIRDNY+T  KFN GLS  QV  
Sbjct: 183  MNISPHAYVSSGQQFPAQVKFTRILRCDPLFENEFCDAIRDNYFTKYKFNFGLSEDQVQS 242

Query: 2760 LLWLFDSRRMKVQKS 2716
            L+WLF+SR+ +V +S
Sbjct: 243  LMWLFNSRKREVPRS 257


>emb|CBI27158.3| unnamed protein product [Vitis vinifera]
          Length = 1664

 Score =  176 bits (447), Expect = 3e-41
 Identities = 98/187 (52%), Positives = 124/187 (66%)
 Frame = -2

Query: 3120 GAIFMASRSTKRECLKRNLFGLPPSQHNFVKKVKSGMVLFLFEYEERKLFGVFQASSDGD 2941
            GAIFM++R T  ECL+RNLFGLP S+  FVK VK GMVLFLFEYE+R+L GVFQAS+DG 
Sbjct: 14   GAIFMSNRKTMEECLRRNLFGLPFSKAGFVKHVKVGMVLFLFEYEKRELHGVFQASTDGA 73

Query: 2940 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLSRYQVSD 2761
            ++IVP AF SSGK+F +QVR  TIW C PL+E +F  AIRDNY+ ANKFN GLS+ QV  
Sbjct: 74   IDIVPEAFCSSGKRFSAQVRITTIWNCTPLTEHEFSDAIRDNYFAANKFNFGLSKDQVHR 133

Query: 2760 LLWLFDSRRMKVQKSKSLVSRDIVENRFVKNCGRRGALVDDKHILGDSGKNRLAMDDEPI 2581
            LL LF S+++K  + +  + R  V      + G +   VD K        + +  D  P 
Sbjct: 134  LLLLFSSKKLKDLQPQRQLRRSNVSKPVRSSLG-KVRRVDAKTGHRKENVHGVNNDLWPA 192

Query: 2580 NLAKYPG 2560
             L +YPG
Sbjct: 193  ILTEYPG 199


>ref|NP_181059.1| DCD (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|145330364|ref|NP_001078007.1| DCD
            (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|238479462|ref|NP_001154553.1| DCD
            (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|3668090|gb|AAC61822.1| hypothetical protein
            [Arabidopsis thaliana] gi|330253976|gb|AEC09070.1| DCD
            (Development and Cell Death) domain protein [Arabidopsis
            thaliana] gi|330253977|gb|AEC09071.1| DCD (Development
            and Cell Death) domain protein [Arabidopsis thaliana]
            gi|330253978|gb|AEC09072.1| DCD (Development and Cell
            Death) domain protein [Arabidopsis thaliana]
          Length = 879

 Score =  159 bits (403), Expect = 3e-36
 Identities = 84/154 (54%), Positives = 107/154 (69%), Gaps = 2/154 (1%)
 Frame = -2

Query: 3168 RRKSMKFDGDQESSF--VGAIFMASRSTKRECLKRNLFGLPPSQHNFVKKVKSGMVLFLF 2995
            RR   +F+G         GAIFM++ ST++ECL R LFGLP     FVK VK+GM+LFLF
Sbjct: 5    RRMMEEFNGASSGGEPEYGAIFMSNNSTRKECLSRKLFGLPIGLGGFVKHVKAGMMLFLF 64

Query: 2994 EYEERKLFGVFQASSDGDMNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDN 2815
            E+E+R+L GVFQA SDG +NI P+AF SSGKQFP+QV+F   W C PL E +F  AI +N
Sbjct: 65   EFEKRELHGVFQACSDGAINIEPNAFRSSGKQFPAQVKFTEKWRCRPLCESEFGNAIHEN 124

Query: 2814 YYTANKFNIGLSRYQVSDLLWLFDSRRMKVQKSK 2713
            Y+T  KFN GLS+ QV  LL LF  +  KV++S+
Sbjct: 125  YFTPTKFNFGLSKAQVQRLLKLFSMK--KVERSR 156


>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  158 bits (399), Expect = 1e-35
 Identities = 80/145 (55%), Positives = 101/145 (69%)
 Frame = -2

Query: 3120 GAIFMASRSTKRECLKRNLFGLPPSQHNFVKKVKSGMVLFLFEYEERKLFGVFQASSDGD 2941
            GAIFM++  T+ EC +R LFGLP    +FV ++KSGM+LFLFEYE R L GVFQA+SDG 
Sbjct: 17   GAIFMSNCVTRAECFRRKLFGLPYWLGDFVLQIKSGMILFLFEYENRVLHGVFQATSDGA 76

Query: 2940 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLSRYQVSD 2761
            MNIVPHA+ SSG++FP+QV+F  +W C P+ E  F  AI+DNY++A KFN GLSR QV  
Sbjct: 77   MNIVPHAYSSSGQKFPAQVKFSILWSCNPIFEDRFQSAIKDNYFSAKKFNFGLSRMQVHR 136

Query: 2760 LLWLFDSRRMKVQKSKSLVSRDIVE 2686
            LL LF   +   Q     +S D  E
Sbjct: 137  LLSLFSLTKFSDQLHTRQLSSDPFE 161


>ref|XP_002879533.1| hypothetical protein ARALYDRAFT_482479 [Arabidopsis lyrata subsp.
            lyrata] gi|297325372|gb|EFH55792.1| hypothetical protein
            ARALYDRAFT_482479 [Arabidopsis lyrata subsp. lyrata]
          Length = 890

 Score =  157 bits (396), Expect = 2e-35
 Identities = 79/136 (58%), Positives = 102/136 (75%)
 Frame = -2

Query: 3120 GAIFMASRSTKRECLKRNLFGLPPSQHNFVKKVKSGMVLFLFEYEERKLFGVFQASSDGD 2941
            GAIFM++ ST++ECL R LFGLP     FVK+VK+GM+LFLFE+E+R+L GVFQA SDG 
Sbjct: 15   GAIFMSNNSTRKECLSRGLFGLPIGLAGFVKQVKAGMMLFLFEFEKRELHGVFQACSDGA 74

Query: 2940 MNIVPHAFLSSGKQFPSQVRFKTIWYCEPLSERDFCGAIRDNYYTANKFNIGLSRYQVSD 2761
            +NI P+AF SSGKQFP+QV+F   W C PL E +F  AI +NY+T+ KF  GLS+ QV  
Sbjct: 75   INIEPNAFQSSGKQFPAQVKFTEKWRCRPLCESEFGNAIHENYFTSKKFKFGLSKAQVQR 134

Query: 2760 LLWLFDSRRMKVQKSK 2713
            LL LF  +  KV++S+
Sbjct: 135  LLKLFCLK--KVERSR 148


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