BLASTX nr result

ID: Coptis24_contig00008592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008592
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853...    74   9e-12
ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853...    70   2e-10
ref|NP_568056.1| uncharacterized protein [Arabidopsis thaliana] ...    70   2e-10

>ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|222849070|gb|EEE86617.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/48 (81%), Positives = 40/48 (83%)
 Frame = -2

Query: 453 TSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310
           TSRI   LG VESLMPLHSAIA+ARLKSSIA DSSCWSWLSQGL   L
Sbjct: 48  TSRIVSVLGSVESLMPLHSAIANARLKSSIAVDSSCWSWLSQGLATPL 95


>ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853459 isoform 1 [Vitis
           vinifera] gi|297741456|emb|CBI32587.3| unnamed protein
           product [Vitis vinifera]
          Length = 94

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/49 (75%), Positives = 39/49 (79%)
 Frame = -2

Query: 456 CTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310
           C SRI  ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQG  L L
Sbjct: 46  CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQGRALPL 94


>ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|222849455|gb|EEE87002.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = -2

Query: 453 TSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310
           +SR    LG VESLMPLH+AIA+ARLKSSIA DSSCWSWLS+GL   L
Sbjct: 48  SSRAVSVLGSVESLMPLHNAIANARLKSSIAVDSSCWSWLSRGLATPL 95


>ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853459 isoform 2 [Vitis
           vinifera]
          Length = 94

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = -2

Query: 456 CTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQ 328
           C SRI  ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQ
Sbjct: 46  CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQ 88


>ref|NP_568056.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4914442|emb|CAB43645.1| putative protein [Arabidopsis
           thaliana] gi|7270914|emb|CAB80593.1| putative protein
           [Arabidopsis thaliana] gi|21593820|gb|AAM65787.1|
           unknown [Arabidopsis thaliana]
           gi|26449378|dbj|BAC41816.1| unknown protein [Arabidopsis
           thaliana] gi|28416791|gb|AAO42926.1| At4g39300
           [Arabidopsis thaliana] gi|51971781|dbj|BAD44555.1|
           unknown protein [Arabidopsis thaliana]
           gi|51971935|dbj|BAD44632.1| unknown protein [Arabidopsis
           thaliana] gi|51972001|dbj|BAD44665.1| unknown protein
           [Arabidopsis thaliana] gi|332661653|gb|AEE87053.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 96

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/47 (72%), Positives = 40/47 (85%)
 Frame = -2

Query: 450 SRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310
           SR+  ALG VE+++PLHSA+ASARL+SSIAADSSCWS LSQGL   L
Sbjct: 50  SRVLSALGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQGLATPL 96


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