BLASTX nr result
ID: Coptis24_contig00008592
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008592 (460 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|2... 79 5e-13 ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853... 74 9e-12 ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853... 70 2e-10 ref|NP_568056.1| uncharacterized protein [Arabidopsis thaliana] ... 70 2e-10 >ref|XP_002306106.1| predicted protein [Populus trichocarpa] gi|222849070|gb|EEE86617.1| predicted protein [Populus trichocarpa] Length = 95 Score = 78.6 bits (192), Expect = 5e-13 Identities = 39/48 (81%), Positives = 40/48 (83%) Frame = -2 Query: 453 TSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310 TSRI LG VESLMPLHSAIA+ARLKSSIA DSSCWSWLSQGL L Sbjct: 48 TSRIVSVLGSVESLMPLHSAIANARLKSSIAVDSSCWSWLSQGLATPL 95 >ref|XP_003631652.1| PREDICTED: uncharacterized protein LOC100853459 isoform 1 [Vitis vinifera] gi|297741456|emb|CBI32587.3| unnamed protein product [Vitis vinifera] Length = 94 Score = 74.3 bits (181), Expect = 9e-12 Identities = 37/49 (75%), Positives = 39/49 (79%) Frame = -2 Query: 456 CTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310 C SRI ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQG L L Sbjct: 46 CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQGRALPL 94 >ref|XP_002313047.1| predicted protein [Populus trichocarpa] gi|222849455|gb|EEE87002.1| predicted protein [Populus trichocarpa] Length = 95 Score = 72.4 bits (176), Expect = 4e-11 Identities = 35/48 (72%), Positives = 39/48 (81%) Frame = -2 Query: 453 TSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310 +SR LG VESLMPLH+AIA+ARLKSSIA DSSCWSWLS+GL L Sbjct: 48 SSRAVSVLGSVESLMPLHNAIANARLKSSIAVDSSCWSWLSRGLATPL 95 >ref|XP_003631653.1| PREDICTED: uncharacterized protein LOC100853459 isoform 2 [Vitis vinifera] Length = 94 Score = 70.1 bits (170), Expect = 2e-10 Identities = 34/43 (79%), Positives = 36/43 (83%) Frame = -2 Query: 456 CTSRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQ 328 C SRI ALG VESLMPLHSA+ASARLKS IA DS+ WSWLSQ Sbjct: 46 CASRILSALGSVESLMPLHSAVASARLKSFIAVDSTSWSWLSQ 88 >ref|NP_568056.1| uncharacterized protein [Arabidopsis thaliana] gi|4914442|emb|CAB43645.1| putative protein [Arabidopsis thaliana] gi|7270914|emb|CAB80593.1| putative protein [Arabidopsis thaliana] gi|21593820|gb|AAM65787.1| unknown [Arabidopsis thaliana] gi|26449378|dbj|BAC41816.1| unknown protein [Arabidopsis thaliana] gi|28416791|gb|AAO42926.1| At4g39300 [Arabidopsis thaliana] gi|51971781|dbj|BAD44555.1| unknown protein [Arabidopsis thaliana] gi|51971935|dbj|BAD44632.1| unknown protein [Arabidopsis thaliana] gi|51972001|dbj|BAD44665.1| unknown protein [Arabidopsis thaliana] gi|332661653|gb|AEE87053.1| uncharacterized protein [Arabidopsis thaliana] Length = 96 Score = 70.1 bits (170), Expect = 2e-10 Identities = 34/47 (72%), Positives = 40/47 (85%) Frame = -2 Query: 450 SRIAMALGCVESLMPLHSAIASARLKSSIAADSSCWSWLSQGLVLTL 310 SR+ ALG VE+++PLHSA+ASARL+SSIAADSSCWS LSQGL L Sbjct: 50 SRVLSALGSVETMIPLHSAVASARLRSSIAADSSCWSLLSQGLATPL 96