BLASTX nr result

ID: Coptis24_contig00008587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008587
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    47   1e-06
emb|CAN61978.1| hypothetical protein VITISV_038568 [Vitis vinifera]    40   3e-06
emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]    40   3e-06
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]    43   3e-06
emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]    46   6e-06

>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = -2

Query: 624 SFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAPTCAMCNLLEEN 463
           SFP   +WKV +  +V FF W A  G+TL  D L +R   +A  C +C   EE+
Sbjct: 428 SFPSSAIWKVSVQPRVSFFGWEATWGKTLTLDQLQRRGWALANRCYLCQRHEES 481



 Score = 32.0 bits (71), Expect(2) = 1e-06
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
 Frame = -1

Query: 376 VEDLLSRW------PRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSMTK 227
           V+++LS W       +R+G      +W   P  + W +WK RN + FK +  S+ +
Sbjct: 513 VKEMLSGWNGTFVGKKRKG------VWKASPLCLFWTVWKTRNKVAFKEEELSIQR 562


>emb|CAN61978.1| hypothetical protein VITISV_038568 [Vitis vinifera]
          Length = 731

 Score = 40.0 bits (92), Expect(2) = 3e-06
 Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
 Frame = -2

Query: 666 FVVKQSRNLGTQLRSF--PCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAPT 493
           F VK   N+    R    P  V+W   +  KV FF W A  G+ L  D L +R   +A  
Sbjct: 547 FSVKSLYNILVSRRGVQSPINVIWNPCVPTKVCFFAWEAFWGKVLTLDQLKKRGRCLANR 606

Query: 492 CAMCNLLEENTTYDAACASSFFCGVLCKWFF 400
           C +C   EE  + D      F   VL +  F
Sbjct: 607 CFLC--CEEEESIDHILIQCFRARVLWELLF 635



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = -1

Query: 379 SVEDLLSRWPRRRGNNFGAI---LWWLLPYAVMWVLWKMRNNLIFKHKTPSMTK 227
           SV D LS W    G N G     +W + P  + WV+WK RN + F ++  SM +
Sbjct: 647 SVRDTLSGWC---GFNLGKKRRKVWKVAPLCIFWVVWKERNRIAFDNEELSMNR 697


>emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]
          Length = 464

 Score = 39.7 bits (91), Expect(2) = 3e-06
 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
 Frame = -1

Query: 379 SVEDLLSRWPRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSMTKTILEVKGLL 200
           SVE++LS W           +W  +P  + W +WK RN L FK    +  K    +  ++
Sbjct: 380 SVEEVLSSWKGSFVGRKRKEVWKAIPLFIFWTIWKERNRLAFKGGVLAFQKLKTSLVYII 439

Query: 199 WTGCH-HL*IEGNIILGI--WLCT 137
           W+    ++ +E   ++G   WL +
Sbjct: 440 WSWAKVYIDMESKSLIGFLEWLAS 463



 Score = 37.4 bits (85), Expect(2) = 3e-06
 Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -2

Query: 666 FVVKQSRNL--GTQLRSFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAPT 493
           F VK + N+   +Q   FP   VW   I  K+ FF W A  G+ L  D L +R   +   
Sbjct: 280 FKVKYAYNVLANSQGPDFPHNNVWVGKIPTKIAFFAWEATWGKVLTLDRLQRRGWHLLNR 339

Query: 492 CAMCNLLEENTTY 454
           C +C   EE   +
Sbjct: 340 CFLCGCEEETINH 352


>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
          Length = 1848

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 22/58 (37%), Positives = 31/58 (53%)
 Frame = -2

Query: 624  SFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAPTCAMCNLLEENTTYD 451
            SFP   +WKV +  K+ FF W A  G+ L  D + +R   +A  C MC  +E+  T D
Sbjct: 1680 SFPSSCIWKVWVQPKISFFAWEAAWGKALTLDLVQRRGWSLANRCYMC--MEKEETID 1735



 Score = 33.5 bits (75), Expect(2) = 3e-06
 Identities = 17/62 (27%), Positives = 24/62 (38%)
 Frame = -1

Query: 379  SVEDLLSRWPRRRGNNFGAILWWLLPYAVMWVLWKMRNNLIFKHKTPSMTKTILEVKGLL 200
            SV + L  W           +W   P  + W +WK RN L FK    S+ +        L
Sbjct: 1764 SVRETLLSWQTSSVGKKHRKVWRAAPLHIFWTVWKARNRLAFKDDVISIQRLKYSFLCSL 1823

Query: 199  WT 194
            W+
Sbjct: 1824 WS 1825


>emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]
          Length = 1539

 Score = 45.8 bits (107), Expect(2) = 6e-06
 Identities = 24/79 (30%), Positives = 35/79 (44%)
 Frame = -2

Query: 624 SFPCGVVWKVPILLKVKFFFWGAIHGRTLIADALIQRETIVAPTCAMCNLLEENTTYDAA 445
           SFP   +WKV +  +V FF W A  G+ L  D L +R   +A  C +C   EE+  +   
Sbjct: 270 SFPSSAIWKVTVQPRVSFFGWEATWGKALTLDQLQRRGWALANRCYLCQRHEESIDHILL 329

Query: 444 CASSFFCGVLCKWFFLWWH 388
               +      K  F  W+
Sbjct: 330 HCEKWVLSATVKETFSGWN 348



 Score = 30.0 bits (66), Expect(2) = 6e-06
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -1

Query: 319 LWWLLPYAVMWVLWKMRNNLIFKHKTPSMTKTILEVKGLLWT 194
           +W   P  + W +WK RN + F+ +  S+ +        LW+
Sbjct: 359 VWKASPLCLFWTVWKTRNKVAFEEEELSIQRLKASFVYFLWS 400


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