BLASTX nr result

ID: Coptis24_contig00008584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008584
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634377.1| PREDICTED: uncharacterized protein LOC100259...   122   2e-25
ref|XP_002313154.1| predicted protein [Populus trichocarpa] gi|2...   120   8e-25
ref|XP_002306907.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
ref|XP_002298754.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
dbj|BAF85832.1| alpha-1,2-fucosidase [Lilium longiflorum]             117   4e-24

>ref|XP_003634377.1| PREDICTED: uncharacterized protein LOC100259103 isoform 2 [Vitis
           vinifera] gi|359492197|ref|XP_002280550.2| PREDICTED:
           uncharacterized protein LOC100259103 isoform 1 [Vitis
           vinifera] gi|302142607|emb|CBI19810.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  122 bits (306), Expect = 2e-25
 Identities = 65/116 (56%), Positives = 74/116 (63%)
 Frame = -2

Query: 526 MDSSNKRGYXXXXXXXXXXXXXXXXAKFFSSQFVKYGLVIVFNVMMWGCYVNSLKALSSL 347
           M+    RGY                AK FSSQ +KYGLVI+FNV MWGCYVNSLKALSSL
Sbjct: 1   MEGKKSRGYAWAISAGVNAALAAISAKLFSSQVIKYGLVIIFNVTMWGCYVNSLKALSSL 60

Query: 346 QATVTNFATNXXXXXXXXXXXFDEIISTKWFVGALLIVLGVFILSKSSVETKTHSD 179
           QATVTNFA N           F+E +  +WF GALLIV+GVFILSKSS+E K  +D
Sbjct: 61  QATVTNFAANFLSSGLAGFFLFEEALPFQWFAGALLIVIGVFILSKSSIERKASTD 116


>ref|XP_002313154.1| predicted protein [Populus trichocarpa] gi|222849562|gb|EEE87109.1|
            predicted protein [Populus trichocarpa]
          Length = 803

 Score =  120 bits (300), Expect = 8e-25
 Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 2/171 (1%)
 Frame = -2

Query: 1108 WRGNMGTVQILMHQKYCHSFENFLNKGKYPEGTQSCFKLWDKPSNVSQPLGDHRLDFDDS 929
            W G  G        +        ++ G+Y + T +  KL   PS+V Q LGD +L+FD+S
Sbjct: 56   WTGTPGNYTNPHAPEALSVVRKLVDNGQYADATTAAEKLSHDPSDVYQLLGDIKLEFDNS 115

Query: 928  HVAHDVKPYRIELDLDTATVKLIYSVEDVVFTGGRYPSNPHEVR*L*QRFPEANRALLSF 749
            H+ +  K Y  ELDLDTAT ++ YSV DV +T   + SNP++V  +  +   +    +SF
Sbjct: 116  HLKYVEKSYHRELDLDTATARVKYSVGDVEYTREYFASNPNQV--IATKISGSKSGSVSF 173

Query: 748  T-SIYRKLQHQSRVTAENQIILE-LCPNKRVSPKGNLNDNPKGVQFTAILS 602
            T  +  K+ H S V  ENQII+E  CP KR+ PK N +DNPKG+QFTAIL+
Sbjct: 174  TVYLDSKMHHYSYVKGENQIIMEGSCPGKRIPPKLNADDNPKGIQFTAILN 224


>ref|XP_002306907.1| predicted protein [Populus trichocarpa] gi|222856356|gb|EEE93903.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  119 bits (297), Expect = 2e-24
 Identities = 64/116 (55%), Positives = 73/116 (62%)
 Frame = -2

Query: 526 MDSSNKRGYXXXXXXXXXXXXXXXXAKFFSSQFVKYGLVIVFNVMMWGCYVNSLKALSSL 347
           MD + + GY                AKFFS Q +KYGLV++FNV MWGCYVNSLKALSSL
Sbjct: 1   MDGTKRTGYVWAISAGLNAAFAAIAAKFFSYQVIKYGLVVLFNVTMWGCYVNSLKALSSL 60

Query: 346 QATVTNFATNXXXXXXXXXXXFDEIISTKWFVGALLIVLGVFILSKSSVETKTHSD 179
           QATVTNFA N           F E +S +WF GALLIV+GV ILSKSS+E K   D
Sbjct: 61  QATVTNFAANFLSSGLAGFFLFKETLSVQWFAGALLIVIGVVILSKSSIERKESID 116


>ref|XP_002298754.1| predicted protein [Populus trichocarpa] gi|222846012|gb|EEE83559.1|
            predicted protein [Populus trichocarpa]
          Length = 808

 Score =  119 bits (297), Expect = 2e-24
 Identities = 67/147 (45%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
 Frame = -2

Query: 1039 LNKGKYPEGTQSCFKLWDKPSNVSQPLGDHRLDFDDSHVAHDVKPYRIELDLDTATVKLI 860
            ++ G+Y E T +  KL    S+V Q LGD +L+FDDSH+ +D K Y+ ELDLDTAT ++ 
Sbjct: 78   VDNGQYAEATTAAEKLSGNQSDVYQLLGDIKLEFDDSHLKYDEKTYKRELDLDTATARVK 137

Query: 859  YSVEDVVFTGGRYPSNPHEVR*L*QRFPEANRALLSFT-SIYRKLQHQSRVTAENQIILE 683
            YSV D+ +T   + SNP++V  +  +   +    +SFT S+  K+ H S V  ENQII+E
Sbjct: 138  YSVADIEYTREHFASNPNQV--IVTKISGSKPGSVSFTVSLDSKMSHHSYVKGENQIIIE 195

Query: 682  -LCPNKRVSPKGNLNDNPKGVQFTAIL 605
              CP  R + K N ND+P+G+QFTAIL
Sbjct: 196  GSCPGNRYAQKLNENDSPQGIQFTAIL 222


>dbj|BAF85832.1| alpha-1,2-fucosidase [Lilium longiflorum]
          Length = 854

 Score =  117 bits (294), Expect = 4e-24
 Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 2/147 (1%)
 Frame = -2

Query: 1039 LNKGKYPEGTQSCFKLWDKPSNVSQPLGDHRLDFDDSHVAHDVKPYRIELDLDTATVKLI 860
            ++ GKY E + + F L   PS+V QPLG   L+F DSHVA+    Y+ ELDL TAT K+ 
Sbjct: 99   VDDGKYAEASLAAFDLSGHPSDVYQPLGTMNLEFGDSHVAY--SNYQRELDLTTATAKVT 156

Query: 859  YSVEDVVFTGGRYPSNPHEVR*L*QRFPEANRALLSF-TSIYRKLQHQSRVTAENQIILE 683
            YS+ DV FT   + SNPH+V  L  +        LSF  S+  KL HQS     N+II+E
Sbjct: 157  YSLGDVEFTREHFSSNPHQV--LVTKISANKSGSLSFIVSLDSKLHHQSSADGVNRIIME 214

Query: 682  -LCPNKRVSPKGNLNDNPKGVQFTAIL 605
              CP +R++PKGNL +N KG+QF+A+L
Sbjct: 215  GSCPGRRIAPKGNLFENNKGIQFSAVL 241


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