BLASTX nr result

ID: Coptis24_contig00008575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008575
         (1697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282805.1| PREDICTED: uncharacterized protein LOC100244...   323   9e-86
emb|CAN65241.1| hypothetical protein VITISV_025050 [Vitis vinifera]   323   9e-86
ref|XP_002531483.1| conserved hypothetical protein [Ricinus comm...   288   3e-75
ref|XP_004141487.1| PREDICTED: uncharacterized protein LOC101210...   285   3e-74
ref|XP_002329255.1| predicted protein [Populus trichocarpa] gi|2...   278   4e-72

>ref|XP_002282805.1| PREDICTED: uncharacterized protein LOC100244706 [Vitis vinifera]
           gi|298204399|emb|CBI16879.3| unnamed protein product
           [Vitis vinifera]
          Length = 421

 Score =  323 bits (828), Expect = 9e-86
 Identities = 167/280 (59%), Positives = 202/280 (72%), Gaps = 2/280 (0%)
 Frame = +2

Query: 71  MGSKGRIPPHLRRPLSGPDMMHPDLFXXXXXXXXXXXXXXXXXFDVLPPPELLEQKLDAQ 250
           MGSKGRIPPHLRRPL GP +MHPD F                 FD+LPPPE++EQKL AQ
Sbjct: 1   MGSKGRIPPHLRRPLPGPGLMHPDSFVPGIRPPHGVFSP----FDMLPPPEVMEQKLAAQ 56

Query: 251 LVEMQALATENRRLANTHGTLRXXXXXXXXXXXXXXYHIAAVKNEREHQFRGLVDKISKM 430
            V+MQ LA EN+RLA THGTLR                I  +K+ERE + R L DKI+KM
Sbjct: 57  HVDMQRLANENQRLAATHGTLRQELAAAQHELQMLQAQIGVMKSEREQRMRSLTDKIAKM 116

Query: 431 EVEFQAAEPVKMELQQARADAQNLIVARQELMTKVQQLTQDLKRTHSEVQ-VPALMSELD 607
           E E +AAEPVK+ELQQARADAQ+L+ ARQEL++KVQQLTQDL+R+HS+VQ +PALM+EL+
Sbjct: 117 EAELKAAEPVKLELQQARADAQSLVAARQELISKVQQLTQDLQRSHSDVQQIPALMAELE 176

Query: 608 GLRQEYQRCRETYDYEKKLYNDHFQSLQLMENNYISMARELEKLRAELANTANLERQS-A 784
            LRQEYQ CR TYDYEKKLYNDH +SLQ+ME NY++MARE+EKLRAEL NTAN++R++  
Sbjct: 177 SLRQEYQHCRATYDYEKKLYNDHLESLQVMEKNYMTMAREVEKLRAELTNTANMDRRTGG 236

Query: 785 PYGAPTGYKENETAGQNPYGSTGYKENEAAGHHSYGAPTG 904
           PYG PTGY E E +G +P G   Y++        YG P G
Sbjct: 237 PYGGPTGYNEGEASGHHPIGHNAYED-------GYGVPQG 269



 Score = 84.3 bits (207), Expect = 9e-14
 Identities = 43/71 (60%), Positives = 44/71 (61%)
 Frame = +2

Query: 1379 QRGPVYDPSRGPGYDASVRGPGYDAPPRTASGPQGQMVAPANTAQYGSVTPPTRAGGSYE 1558
            QRGP YD  RGP YDA  RG  YDAP R A GP GQ V   N   YGS TPP R+GG YE
Sbjct: 353  QRGPAYDGQRGPVYDAP-RGTNYDAPTRAAPGPHGQ-VPSGNNVPYGSATPPARSGGGYE 410

Query: 1559 HQPRGGNMTGR 1591
              PRGGN   R
Sbjct: 411  AAPRGGNPVRR 421


>emb|CAN65241.1| hypothetical protein VITISV_025050 [Vitis vinifera]
          Length = 562

 Score =  323 bits (828), Expect = 9e-86
 Identities = 167/280 (59%), Positives = 202/280 (72%), Gaps = 2/280 (0%)
 Frame = +2

Query: 71  MGSKGRIPPHLRRPLSGPDMMHPDLFXXXXXXXXXXXXXXXXXFDVLPPPELLEQKLDAQ 250
           MGSKGRIPPHLRRPL GP +MHPD F                 FD+LPPPE++EQKL AQ
Sbjct: 1   MGSKGRIPPHLRRPLPGPGLMHPDSFVPGIRPPHGVFSP----FDMLPPPEVMEQKLAAQ 56

Query: 251 LVEMQALATENRRLANTHGTLRXXXXXXXXXXXXXXYHIAAVKNEREHQFRGLVDKISKM 430
            V+MQ LA EN+RLA THGTLR                I  +K+ERE + R L DKI+KM
Sbjct: 57  HVDMQRLANENQRLAATHGTLRQELAAAQHELQMLQAQIGVMKSEREQRMRSLTDKIAKM 116

Query: 431 EVEFQAAEPVKMELQQARADAQNLIVARQELMTKVQQLTQDLKRTHSEVQ-VPALMSELD 607
           E E +AAEPVK+ELQQARADAQ+L+ ARQEL++KVQQLTQDL+R+HS+VQ +PALM+EL+
Sbjct: 117 EAELKAAEPVKLELQQARADAQSLVAARQELISKVQQLTQDLQRSHSDVQQIPALMAELE 176

Query: 608 GLRQEYQRCRETYDYEKKLYNDHFQSLQLMENNYISMARELEKLRAELANTANLERQS-A 784
            LRQEYQ CR TYDYEKKLYNDH +SLQ+ME NY++MARE+EKLRAEL NTAN++R++  
Sbjct: 177 SLRQEYQHCRATYDYEKKLYNDHLESLQVMEKNYMTMAREVEKLRAELTNTANMDRRTGG 236

Query: 785 PYGAPTGYKENETAGQNPYGSTGYKENEAAGHHSYGAPTG 904
           PYG PTGY E E +G +P G   Y++        YG P G
Sbjct: 237 PYGGPTGYNEGEASGHHPIGHNAYED-------GYGVPQG 269



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 33/70 (47%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
 Frame = +2

Query: 1379 QRGPVYDPSRGPGYDA---------------SVRGPGYDAPPRTASGPQGQMVAPANTAQ 1513
            QRGP YD  +GPGYDA               + RG  YDAP R A GP GQ V   N   
Sbjct: 337  QRGPGYDAQKGPGYDAQRGPAYDGQRGPVYDAPRGTNYDAPTRAAPGPHGQ-VPSGNNVP 395

Query: 1514 YGSVTPPTRA 1543
            YGS TPP R+
Sbjct: 396  YGSATPPARS 405


>ref|XP_002531483.1| conserved hypothetical protein [Ricinus communis]
            gi|223528910|gb|EEF30907.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 467

 Score =  288 bits (737), Expect = 3e-75
 Identities = 171/338 (50%), Positives = 211/338 (62%), Gaps = 11/338 (3%)
 Frame = +2

Query: 71   MGSKGRIPP--HLRRPLSGPDMMHPDLFXXXXXXXXXXXXXXXXXFDVLPPPELLEQKLD 244
            MGSKGRIPP  HLRRPL G  +MHPD F                 FD+LPPPE+LEQKL 
Sbjct: 1    MGSKGRIPPPHHLRRPLPGGGIMHPDPFGPGVHGPPPGPFPA---FDMLPPPEVLEQKLA 57

Query: 245  AQLVEMQALATENRRLANTHGTLRXXXXXXXXXXXXXXYHIAAVKNEREHQFRGLVDKIS 424
             Q VE+Q LATEN+RLA TH TLR                I  +K ERE Q RGL+DKI+
Sbjct: 58   GQQVEIQRLATENQRLAATHVTLRQELAAAQQELQMLHNDIGVLKAEREQQMRGLMDKIA 117

Query: 425  KMEVEFQAAEPVKMELQQARADAQNLIVARQELMTKVQQLTQDLKRTHSEVQ-VPALMSE 601
            KME E +AAEPV+ ELQQAR +A+ L+VARQELMTKV QLTQDL R H++VQ +P L+SE
Sbjct: 118  KMETELKAAEPVRSELQQARTEAEKLVVARQELMTKVHQLTQDLHRAHADVQQIPILISE 177

Query: 602  LDGLRQEYQRCRETYDYEKKLYNDHFQSLQLMENNYISMARELEKLRAELANTANLERQS 781
            LD LRQEYQRCR ++DYEKKL++DH +SLQ+MENNY++MARE+EKL  EL NT+N++ ++
Sbjct: 178  LDSLRQEYQRCRVSFDYEKKLFSDHRESLQVMENNYVTMAREVEKLHLELTNTSNVDIRT 237

Query: 782  ---APYGAPTGYKENETA----GQNPYGSTGYKENEAAGHHSYGAPTGYKDNEAAVQHHY 940
                PYG  TG  ENET+    G+N Y    Y  +++ GH     P       AA     
Sbjct: 238  VTGGPYGGATGNNENETSSRSVGENKY-EDSYGVSQSQGH----TPIPGNSGSAAATAAG 292

Query: 941  GVPTGYKENEVAGHHSYS-APTGHKDNEAAGQHLAGQN 1051
               TG K    AG  +Y+ A +G     +A     G N
Sbjct: 293  SASTGAKAGTGAGTPTYTGAQSGSASTRSAYDTPRGPN 330



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 40/71 (56%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +2

Query: 1382 RGPVYDPSRGPGYDASVRGPGYDAPPR-TASGPQGQMVAPANTAQYGSVTPPTRAGGSYE 1558
            R P YD  +GP YDAS R  GYD   R TA  P GQM  PAN   YGS TP TRA   YE
Sbjct: 399  RTPGYDVQQGPHYDAS-RVAGYDPAARGTAVPPHGQMT-PANNVPYGSATPSTRAVSGYE 456

Query: 1559 HQPRGGNMTGR 1591
             Q RGGN   R
Sbjct: 457  AQARGGNPVRR 467


>ref|XP_004141487.1| PREDICTED: uncharacterized protein LOC101210432 [Cucumis sativus]
            gi|449481420|ref|XP_004156177.1| PREDICTED:
            uncharacterized protein LOC101226645 [Cucumis sativus]
          Length = 398

 Score =  285 bits (728), Expect = 3e-74
 Identities = 166/319 (52%), Positives = 202/319 (63%), Gaps = 3/319 (0%)
 Frame = +2

Query: 71   MGSKGRIPP-HLRRPLSGPDMMHPDLFXXXXXXXXXXXXXXXXXFDVLPPPELLEQKLDA 247
            MGSKGRIPP H RR L G  ++HP+ F                 FD+LPPPE++EQKL  
Sbjct: 1    MGSKGRIPPSHGRRTLQGSGVLHPEAFGHALRPPPGAFPP----FDMLPPPEVMEQKLAG 56

Query: 248  QLVEMQALATENRRLANTHGTLRXXXXXXXXXXXXXXYHIAAVKNEREHQFRGLVDKISK 427
            Q VE+Q LATEN+RLA THGTLR                I AVK+ERE Q R L DKI+K
Sbjct: 57   QHVEIQKLATENQRLAATHGTLRQELAAAQHELQILHAQIGAVKSEREQQARNLSDKIAK 116

Query: 428  MEVEFQAAEPVKMELQQARADAQNLIVARQELMTKVQQLTQDLKRTHSEVQ-VPALMSEL 604
            ME E +A+EP+K+ELQQA++DAQNLIVARQEL+++VQ LTQDL+R H +VQ VP LMSEL
Sbjct: 117  MEAELKASEPIKLELQQAKSDAQNLIVARQELISRVQHLTQDLQRAHGDVQQVPVLMSEL 176

Query: 605  DGLRQEYQRCRETYDYEKKLYNDHFQSLQLMENNYISMARELEKLRAELANTANLERQSA 784
            + LRQEYQ CR TYDYEKKLYNDH +SLQ+ME NYI+MARELEKLRAEL NT++LER+  
Sbjct: 177  ESLRQEYQHCRATYDYEKKLYNDHLESLQVMEKNYITMARELEKLRAELTNTSSLERRHG 236

Query: 785  PYGAPTGYKENETAGQNPYGSTGYKENEAAGHHSYGAPTGYKDNEAAVQHHYGVPTGYKE 964
                             PYG+T   E EA+G+ +      Y+D     Q    +P     
Sbjct: 237  ----------------GPYGTTPNNEIEASGNAA--GQNTYEDGYGVAQGRGPLPATAGG 278

Query: 965  NEVAGHHSYSAP-TGHKDN 1018
               AG  +Y+ P TG   N
Sbjct: 279  ASSAGTTAYTGPQTGSTAN 297



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 39/91 (42%), Positives = 42/91 (46%), Gaps = 20/91 (21%)
 Frame = +2

Query: 1379 QRGPVYDPSRG-------PGYDASVRGPGYDAP-------------PRTASGPQGQMVAP 1498
            QRGP YD  RG       PGYD    GPGY+ P                + G  G   AP
Sbjct: 308  QRGPGYDGGRGSIYDSQRPGYDGQRGGPGYNVPGLPTYDASRGVGYDPQSRGVAGGHAAP 367

Query: 1499 ANTAQYGSVTPPTRAGGSYEHQPRGGNMTGR 1591
             NTA Y S TPP R GG +E Q RGG   GR
Sbjct: 368  GNTAPYRSSTPPGR-GGGFEGQSRGGGNPGR 397


>ref|XP_002329255.1| predicted protein [Populus trichocarpa] gi|222870709|gb|EEF07840.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  278 bits (710), Expect = 4e-72
 Identities = 173/348 (49%), Positives = 216/348 (62%), Gaps = 10/348 (2%)
 Frame = +2

Query: 71   MGSKGRIPP-HLRRPLSGPDMMHPDLFXXXXXXXXXXXXXXXXXFDVLPPPELLEQKLDA 247
            M SKGRIPP HLRRPL G  ++HPD F                 F++LPPPE++EQK+ A
Sbjct: 1    MASKGRIPPPHLRRPLPGSGIVHPDSFGSGLRLPQGPFPP----FEMLPPPEVMEQKIAA 56

Query: 248  QLVEMQALATENRRLANTHGTLRXXXXXXXXXXXXXXYHIAAVKNEREHQFRGLVDKISK 427
            Q  EMQ LATEN+RLA THGTLR               HI AVK ERE Q R LVD I K
Sbjct: 57   QHGEMQRLATENQRLAATHGTLRQELAAAQHELQLLHAHIGAVKAEREQQMRVLVDNIGK 116

Query: 428  MEVEFQAAEPVKMELQQARADAQNLIVARQELMTKVQQLTQDLKRTHSEVQ-VPALMSEL 604
            ME E + AEPV++ELQQAR +A+NL+V RQEL++K+ QL+QDL R   +VQ +PALMSEL
Sbjct: 117  METELKDAEPVRLELQQARVEAENLLVTRQELVSKIHQLSQDLHRAQVDVQQIPALMSEL 176

Query: 605  DGLRQEYQRCRETYDYEKKLYNDHFQSLQLMENNYISMARELEKLRAELANTANLE-RQS 781
            +GLRQEYQRCR +YDYEKKL++DH + LQ ME NYI+M+RELEKLR+EL  TAN++ R  
Sbjct: 177  EGLRQEYQRCRVSYDYEKKLFHDHLEQLQTMEKNYITMSRELEKLRSELTKTANVDIRNG 236

Query: 782  APYGAPTGYKENET---AGQNPYGSTGYKENEAAGH---HSYGAPT-GYKDNEAAVQHHY 940
             PYG P G +   +   AG+N Y   GY   ++ GH   H+ GA   G   N +A     
Sbjct: 237  GPYGGPAGNESEASGHPAGKNIY-EDGYGIPQSQGHPALHNSGAANIGAVGNASA----- 290

Query: 941  GVPTGYKENEVAGHHSYSAPTGHKDNEAAGQHLAGQNAYEDGYAASQV 1084
            G  T Y     AG  S +AP+  K    A +  A +     GY AS++
Sbjct: 291  GTATPY-----AGAQSGAAPS--KPGYEAPRGPAYEPPKVPGYDASRL 331



 Score = 71.2 bits (173), Expect = 8e-10
 Identities = 38/73 (52%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
 Frame = +2

Query: 1379 QRGPVYDPSRGPGYDA-------SVRGPGYDAPP-RTASGPQGQMVAPANTAQYGSVTPP 1534
            QRG  YD  RG GYDA       + RG GYDA   R A+GPQG +  PAN   YGS TPP
Sbjct: 369  QRGHAYDAQRGQGYDAQRLPNYHASRGAGYDAAASRGAAGPQGHVAPPANNMPYGSATPP 428

Query: 1535 TRAGGSYEHQPRG 1573
            T +G  YE   RG
Sbjct: 429  THSGSGYEAPARG 441


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