BLASTX nr result

ID: Coptis24_contig00008567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008567
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]      181   5e-44
emb|CAN64706.1| hypothetical protein VITISV_029008 [Vitis vinifera]   181   5e-44
ref|XP_002521498.1| NAC domain-containing protein, putative [Ric...   170   1e-40
ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trich...   163   2e-38
ref|XP_002311276.1| NAC domain protein, IPR003441 [Populus trich...   159   3e-37

>ref|XP_002269543.1| PREDICTED: protein SOMBRERO [Vitis vinifera]
          Length = 312

 Score =  181 bits (460), Expect = 5e-44
 Identities = 104/176 (59%), Positives = 125/176 (71%), Gaps = 9/176 (5%)
 Frame = -1

Query: 552 QEDGWVVCRVFKKKSHHRGFHHEVSPDHEEMHFSHTTKRGSGCHHLETQQH----YGFTF 385
           QEDGWVVCRVFKKK+H+RGF  E +   +E + +H   R SG   LE +Q+    Y F F
Sbjct: 147 QEDGWVVCRVFKKKNHNRGFQSEAA---QEEYLTHM--RASGSALLEPKQNVQALYDFNF 201

Query: 384 DSSMHLPQLLSPDQLN----VSPSFLNTMDIECSQNLLKLTSTDTGAGLMQQERFNGDWS 217
           D SMHLPQLLSP+       +SP  LNTMDIECSQNLL+LTST  G GL+QQER NGDWS
Sbjct: 202 DGSMHLPQLLSPESAVPPSFISPLSLNTMDIECSQNLLRLTST--GCGLIQQERMNGDWS 259

Query: 216 FLDKLLVSQQGVDQFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDMLKYTK 52
           FLDKLL S Q +DQ  Q+K + SSQ+VD VG S QKFPF +   +G ETD+LK++K
Sbjct: 260 FLDKLLASHQSLDQHSQTKCHPSSQVVDHVGTSAQKFPFQY---LGCETDILKFSK 312


>emb|CAN64706.1| hypothetical protein VITISV_029008 [Vitis vinifera]
          Length = 311

 Score =  181 bits (460), Expect = 5e-44
 Identities = 104/176 (59%), Positives = 125/176 (71%), Gaps = 9/176 (5%)
 Frame = -1

Query: 552 QEDGWVVCRVFKKKSHHRGFHHEVSPDHEEMHFSHTTKRGSGCHHLETQQH----YGFTF 385
           QEDGWVVCRVFKKK+H+RGF  E +   +E + +H   R SG   LE +Q+    Y F F
Sbjct: 146 QEDGWVVCRVFKKKNHNRGFQSEAA---QEEYLTHM--RASGSALLEPKQNVQALYDFNF 200

Query: 384 DSSMHLPQLLSPDQLN----VSPSFLNTMDIECSQNLLKLTSTDTGAGLMQQERFNGDWS 217
           D SMHLPQLLSP+       +SP  LNTMDIECSQNLL+LTST  G GL+QQER NGDWS
Sbjct: 201 DGSMHLPQLLSPESAVPPSFISPLSLNTMDIECSQNLLRLTST--GCGLIQQERMNGDWS 258

Query: 216 FLDKLLVSQQGVDQFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDMLKYTK 52
           FLDKLL S Q +DQ  Q+K + SSQ+VD VG S QKFPF +   +G ETD+LK++K
Sbjct: 259 FLDKLLASHQSLDQHSQTKCHPSSQVVDHVGTSAQKFPFQY---LGCETDILKFSK 311


>ref|XP_002521498.1| NAC domain-containing protein, putative [Ricinus communis]
           gi|223539295|gb|EEF40887.1| NAC domain-containing
           protein, putative [Ricinus communis]
          Length = 314

 Score =  170 bits (431), Expect = 1e-40
 Identities = 100/179 (55%), Positives = 121/179 (67%), Gaps = 12/179 (6%)
 Frame = -1

Query: 552 QEDGWVVCRVFKKKSHHRGFHHEVSPDHEEMHFSHTTKRGSGCHHLETQQH-----YGFT 388
           QEDGWVVCRVFKKK+  RGF  E +   +E HFSH  K G+    +E +QH     Y + 
Sbjct: 147 QEDGWVVCRVFKKKNQTRGFLPEAA---QEEHFSHM-KAGASSVSMEPKQHHMQALYDYN 202

Query: 387 FDSSMHLPQLLSPDQLNVSPSF-----LNTMDIECSQNLLKLTSTDTGAGLMQQERFNGD 223
           FD SMHLPQL SP+   V PSF     LNTMDIECSQNLL+LTST    GL+Q ERF+GD
Sbjct: 203 FDGSMHLPQLFSPESAAVPPSFVTPLSLNTMDIECSQNLLRLTSTS--CGLVQPERFHGD 260

Query: 222 WSFLDKLLVSQQGVDQFCQSKWNSSSQLVDVGPST--QKFPFHHYLGVGGETDMLKYTK 52
           WSFLDKLL S Q +D   Q K N SSQ+VD+G S   QKFPF +   +G ETD+++++K
Sbjct: 261 WSFLDKLLASHQSLDH--QGKGNPSSQVVDMGASVHHQKFPFPY---LGCETDIMRFSK 314


>ref|XP_002316163.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222865203|gb|EEF02334.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 318

 Score =  163 bits (412), Expect = 2e-38
 Identities = 106/183 (57%), Positives = 126/183 (68%), Gaps = 16/183 (8%)
 Frame = -1

Query: 552 QEDGWVVCRVFKKKSHHRGFHHEVSPDHEEMHFSHTTKRGSGCHHLETQQHY------GF 391
           QEDGWVVCRVFKKK+  RGF  EVS   +E HFS   K  +    LE +Q++       +
Sbjct: 146 QEDGWVVCRVFKKKNQTRGFLPEVS---QEEHFSQ-MKASASSLPLEPKQNHMQSIYDDY 201

Query: 390 TFDSSMHLPQLLSPDQLNVSPSF-----LNTM-DIECSQNLLKLTSTDTGAGLMQQE-RF 232
           TFD SMHLPQL SP+   V+PSF     LN M DIECSQNLL+LTS  TG GL+Q   RF
Sbjct: 202 TFDGSMHLPQLFSPESA-VAPSFVSPLSLNNMDDIECSQNLLRLTS--TGCGLVQPAGRF 258

Query: 231 NGDWSFLDKLLVSQQGVD--QFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDMLK 61
           NGDWSFLDKLL SQQ +D  Q  Q+K NSSSQ+VD VG STQKFPF +   +G ETD+L+
Sbjct: 259 NGDWSFLDKLLASQQNLDHHQHYQNKGNSSSQIVDHVGASTQKFPFQY---LGFETDILR 315

Query: 60  YTK 52
           ++K
Sbjct: 316 FSK 318


>ref|XP_002311276.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222851096|gb|EEE88643.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 319

 Score =  159 bits (402), Expect = 3e-37
 Identities = 100/183 (54%), Positives = 122/183 (66%), Gaps = 16/183 (8%)
 Frame = -1

Query: 552 QEDGWVVCRVFKKKSHHRGFHHEVSPDHEEMHFSHTTKRGSGCHHLETQQHY------GF 391
           QEDGWVVCRVFKKK+  RGF  EVS   +E+HFSH  K  +    L+ +Q++       +
Sbjct: 147 QEDGWVVCRVFKKKNQTRGFLPEVS---QEVHFSH-MKASASSFPLDPKQNHLQSLYQDY 202

Query: 390 TFDSSMHLPQLLSPDQLNVSPSFL------NTMDIECSQNLLKLTSTDTGAGLMQQE-RF 232
           T D SMHLPQL SPD   V+PSF+      N  DIECSQNLL+L  T +G G +    RF
Sbjct: 203 TLDGSMHLPQLFSPDSA-VAPSFVSPLSLNNMNDIECSQNLLRL--TPSGCGFVHPAGRF 259

Query: 231 NGDWSFLDKLLVSQQGVD--QFCQSKWNSSSQLVD-VGPSTQKFPFHHYLGVGGETDMLK 61
           NGDWSFLDKLL S Q +D  Q  Q+K NSSSQ+VD VG STQKFPF H   +G ETD+L+
Sbjct: 260 NGDWSFLDKLLASHQNLDHQQHYQNKRNSSSQIVDPVGTSTQKFPFQH---LGFETDILR 316

Query: 60  YTK 52
           ++K
Sbjct: 317 FSK 319


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