BLASTX nr result

ID: Coptis24_contig00008556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008556
         (1152 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P22778.1|ATPO_IPOBA RecName: Full=ATP synthase subunit O, mit...   275   2e-71
dbj|BAA77508.1| F1-ATP synthase delta subunit [Ipomoea batatas]       275   2e-71
ref|XP_002279466.1| PREDICTED: ATP synthase subunit O, mitochond...   273   5e-71
ref|XP_004135930.1| PREDICTED: ATP synthase subunit O, mitochond...   269   9e-70
ref|XP_002313302.1| predicted protein [Populus trichocarpa] gi|1...   264   3e-68

>sp|P22778.1|ATPO_IPOBA RecName: Full=ATP synthase subunit O, mitochondrial; AltName:
            Full=Oligomycin sensitivity conferral protein;
            Short=OSCP; Flags: Precursor gi|168270|gb|AAA33388.1|
            F-1-ATPase delta subunit precursor (EC 3.6.1.3) [Ipomoea
            batatas]
          Length = 244

 Score =  275 bits (703), Expect = 2e-71
 Identities = 144/242 (59%), Positives = 187/242 (77%)
 Frame = -1

Query: 1059 SMALAIRSRSFQNILRAQFQRSIFQTINPENPNLTSSQVSRSYATASASKEKQIKVPVSL 880
            SM  +I  ++  +  R+   RSI        P L++S++ R+YATASASKE++IKVP+++
Sbjct: 9    SMGFSILQKALSSAQRSNAHRSILC------PTLSNSELLRNYATASASKEQKIKVPLTM 62

Query: 879  FGGAGNYASALYLSAVKANVLDKVESEIVDLVEASKNSSMFSQFIRDVSVPGVTRVKAIN 700
            +G +GNYASALYL+AVK+N L+KVESE+ DLVEASK S  FSQF+RD SVP  TRV AI 
Sbjct: 63   YGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAIK 122

Query: 699  DISSAAKFSEVTKNFLAVVADNGRLRNIDAIAKKFVQLTMAHKGEVKAIVTTVIXXXXXX 520
            +I + AKF + T+NFL ++A+NGRL++ID I K+F +LTMAH+GEVKA VTTVI      
Sbjct: 123  EICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIPLPADE 182

Query: 519  XXXXXETLQDIIGQGKTVKLEQKIDPSILGGLVVEFELKVFDMSIRTRARQMERFLRDPV 340
                  TLQ+++GQGK+V++EQKIDP+ILGGLVVEF  KVFDMSIRTRARQMERFLR+P+
Sbjct: 183  EKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERFLREPL 242

Query: 339  NF 334
            NF
Sbjct: 243  NF 244


>dbj|BAA77508.1| F1-ATP synthase delta subunit [Ipomoea batatas]
          Length = 244

 Score =  275 bits (703), Expect = 2e-71
 Identities = 144/242 (59%), Positives = 187/242 (77%)
 Frame = -1

Query: 1059 SMALAIRSRSFQNILRAQFQRSIFQTINPENPNLTSSQVSRSYATASASKEKQIKVPVSL 880
            SM  +I  ++  +  R+   RSI        P L++S++ R+YATASASKE++IKVP+++
Sbjct: 9    SMGFSILQKALSSAQRSNAHRSILC------PTLSNSELLRNYATASASKEQKIKVPLTM 62

Query: 879  FGGAGNYASALYLSAVKANVLDKVESEIVDLVEASKNSSMFSQFIRDVSVPGVTRVKAIN 700
            +G +GNYASALYL+AVK+N L+KVESE+ DLVEASK S  FSQF+RD SVP  TRV AI 
Sbjct: 63   YGVSGNYASALYLAAVKSNTLEKVESELYDLVEASKKSPTFSQFMRDPSVPVDTRVNAIK 122

Query: 699  DISSAAKFSEVTKNFLAVVADNGRLRNIDAIAKKFVQLTMAHKGEVKAIVTTVIXXXXXX 520
            +I + AKF + T+NFL ++A+NGRL++ID I K+F +LTMAH+GEVKA VTTVI      
Sbjct: 123  EICAQAKFGDTTQNFLLILAENGRLKHIDRIVKRFKELTMAHRGEVKATVTTVIALPADE 182

Query: 519  XXXXXETLQDIIGQGKTVKLEQKIDPSILGGLVVEFELKVFDMSIRTRARQMERFLRDPV 340
                  TLQ+++GQGK+V++EQKIDP+ILGGLVVEF  KVFDMSIRTRARQMERFLR+P+
Sbjct: 183  EKELKATLQEMVGQGKSVQIEQKIDPTILGGLVVEFGQKVFDMSIRTRARQMERFLREPL 242

Query: 339  NF 334
            NF
Sbjct: 243  NF 244


>ref|XP_002279466.1| PREDICTED: ATP synthase subunit O, mitochondrial isoform 1 [Vitis
           vinifera] gi|297736243|emb|CBI24881.3| unnamed protein
           product [Vitis vinifera]
          Length = 251

 Score =  273 bits (699), Expect = 5e-71
 Identities = 142/211 (67%), Positives = 172/211 (81%)
 Frame = -1

Query: 966 PNLTSSQVSRSYATASASKEKQIKVPVSLFGGAGNYASALYLSAVKANVLDKVESEIVDL 787
           P L+ S+ SR+YATAS +KE ++KVP+ LFGGAGNYASALY++AVKAN LD VESEI+D 
Sbjct: 38  PALSFSEFSRNYATASVAKEGKVKVPLVLFGGAGNYASALYIAAVKANALDTVESEILDF 97

Query: 786 VEASKNSSMFSQFIRDVSVPGVTRVKAINDISSAAKFSEVTKNFLAVVADNGRLRNIDAI 607
           +EASK S  FSQF++++SV    RVKA+  I S  KFS+VTKNFL V+A+ GRLRN+++I
Sbjct: 98  LEASKRSDNFSQFMKNLSVSRGVRVKALTAICSETKFSDVTKNFLVVLAETGRLRNLESI 157

Query: 606 AKKFVQLTMAHKGEVKAIVTTVIXXXXXXXXXXXETLQDIIGQGKTVKLEQKIDPSILGG 427
           AKKF+ LTMAHKGEV+A+VTTVI           ETLQDIIG GK VKLEQKIDPSILGG
Sbjct: 158 AKKFLDLTMAHKGEVRAVVTTVIPLPTEEEKELKETLQDIIGHGKKVKLEQKIDPSILGG 217

Query: 426 LVVEFELKVFDMSIRTRARQMERFLRDPVNF 334
           LVVEF  KVFDMSI+TR++QMERFLRDP++F
Sbjct: 218 LVVEFSQKVFDMSIKTRSQQMERFLRDPISF 248


>ref|XP_004135930.1| PREDICTED: ATP synthase subunit O, mitochondrial-like [Cucumis
            sativus] gi|449488850|ref|XP_004158191.1| PREDICTED: ATP
            synthase subunit O, mitochondrial-like [Cucumis sativus]
          Length = 249

 Score =  269 bits (688), Expect = 9e-70
 Identities = 151/250 (60%), Positives = 187/250 (74%), Gaps = 6/250 (2%)
 Frame = -1

Query: 1056 MALAIRSRS----FQNILRA--QFQRSIFQTINPENPNLTSSQVSRSYATASASKEKQIK 895
            MA+A R RS    F  +L++  Q QRS   T     P   +S++SR+YAT+S   E ++K
Sbjct: 1    MAMAGRMRSIIPQFNQLLKSESQAQRSAL-TRALLCPTTANSEISRNYATSSKKSEAKVK 59

Query: 894  VPVSLFGGAGNYASALYLSAVKANVLDKVESEIVDLVEASKNSSMFSQFIRDVSVPGVTR 715
            VP+ LFGG GNYASALYL+AVKAN LDK E E+VD  EA K S+ FSQFI D +V   T+
Sbjct: 60   VPLVLFGGTGNYASALYLAAVKANSLDKAEKELVDFAEALKRSATFSQFISDPTVHKDTK 119

Query: 714  VKAINDISSAAKFSEVTKNFLAVVADNGRLRNIDAIAKKFVQLTMAHKGEVKAIVTTVIX 535
            VK I+D+ + AKFSE+ KNFLAV+A+NGRL+ +D IAKKF +LTMAH+GEVKAIV+TVI 
Sbjct: 120  VKVISDVCADAKFSEIMKNFLAVLAENGRLKYVDGIAKKFQELTMAHRGEVKAIVSTVIP 179

Query: 534  XXXXXXXXXXETLQDIIGQGKTVKLEQKIDPSILGGLVVEFELKVFDMSIRTRARQMERF 355
                      ETLQ IIG+GK VKLEQKIDPSILGG+VVEF  KVFDMSI+TRA+QMERF
Sbjct: 180  LPAEEEKELKETLQYIIGEGKKVKLEQKIDPSILGGIVVEFGEKVFDMSIKTRAKQMERF 239

Query: 354  LRDPVNFDTI 325
            LR+PVNF+++
Sbjct: 240  LREPVNFNSL 249


>ref|XP_002313302.1| predicted protein [Populus trichocarpa] gi|118483853|gb|ABK93817.1|
            unknown [Populus trichocarpa] gi|222849710|gb|EEE87257.1|
            predicted protein [Populus trichocarpa]
          Length = 249

 Score =  264 bits (675), Expect = 3e-68
 Identities = 134/230 (58%), Positives = 181/230 (78%)
 Frame = -1

Query: 1014 RAQFQRSIFQTINPENPNLTSSQVSRSYATASASKEKQIKVPVSLFGGAGNYASALYLSA 835
            R+  QRS+        P  T+SQ S++ +T++A KE++IK+P++L+GG GNYASAL+++A
Sbjct: 26   RSAIQRSVL------TPAFTASQPSKNLSTSTAQKEEKIKLPITLYGGTGNYASALFIAA 79

Query: 834  VKANVLDKVESEIVDLVEASKNSSMFSQFIRDVSVPGVTRVKAINDISSAAKFSEVTKNF 655
             ++ VLD+VESEI+DL+ ASK S  FSQF++D+SV   TRVKAIN+I + AKFSE+TKNF
Sbjct: 80   KRSKVLDQVESEILDLIAASKKSPKFSQFLKDLSVRADTRVKAINEICATAKFSEITKNF 139

Query: 654  LAVVADNGRLRNIDAIAKKFVQLTMAHKGEVKAIVTTVIXXXXXXXXXXXETLQDIIGQG 475
            L +VA+NGRL  +++I  KF QLTMA KG +KAIVTT++           ETLQDIIG G
Sbjct: 140  LVIVAENGRLSYLESIVNKFKQLTMADKGIIKAIVTTIMPLPPQEEKELKETLQDIIGHG 199

Query: 474  KTVKLEQKIDPSILGGLVVEFELKVFDMSIRTRARQMERFLRDPVNFDTI 325
            K+V++EQKIDPSILGG+++EFE K+FDMSIRTRA+QMERFLR+PV+FD +
Sbjct: 200  KSVEVEQKIDPSILGGIMIEFEQKLFDMSIRTRAKQMERFLREPVDFDAL 249


Top