BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008553
         (3242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19050.3| unnamed protein product [Vitis vinifera]              976   0.0  
ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vit...   956   0.0  
ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cuc...   932   0.0  
ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like ex...   930   0.0  
ref|XP_002513779.1| RNA binding protein, putative [Ricinus commu...   914   0.0  

>emb|CBI19050.3| unnamed protein product [Vitis vinifera]
          Length = 1007

 Score =  976 bits (2522), Expect = 0.0
 Identities = 522/915 (57%), Positives = 646/915 (70%), Gaps = 3/915 (0%)
 Frame = -3

Query: 3240 WSPQLVNAAIQNAHVFVAAFRVNAHNRLEAYCTIDGLPIDVLISGGAAQNRAVEGDLVAV 3061
            WS ++VN A++  +VF A+FRVNA+NRLEAYCTI+G+  DVLISG A+QNRAVEGD+VAV
Sbjct: 170  WSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIEGVKTDVLISGLASQNRAVEGDIVAV 229

Query: 3060 QLDSLSLWTRLKGSAGHTKNCTPLDGLVLLAKEVQGVGENCNLKEKVXXXXXXXXXXXXX 2881
            ++D  SLW+R+KGS     N         +++E  G   + ++                 
Sbjct: 230  KVDPFSLWSRMKGSTVFPNNAAEN-----ISQEPMG---HNHVNGHHPPVFGPSHVSCFG 281

Query: 2880 XXXXXXPIGKICALVSAFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKE 2701
                   + KICA +++FPSKRPTG VVAII++SPRR A+VGFL V QW  S     +K 
Sbjct: 282  ERSNMDSLEKICAAINSFPSKRPTGSVVAIIERSPRRVAVVGFLSVKQWL-SSRVLHRKG 340

Query: 2700 TNQNKTFVSYSNQEFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDA---MELVGVRIE 2530
            T  NKT++S S+ E+I+L P D KFPKM+V ++ L + IKKRL   DA   MELV  +I 
Sbjct: 341  TKMNKTYLSLSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQIS 400

Query: 2529 NWREDSLLPHACVMHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEE 2350
            +W E+S LP A VMH FGRGGEIEP +AAILFEN+I  +EFSPESLS LP  PW+VP EE
Sbjct: 401  DWGEESSLPLAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEE 460

Query: 2349 LERRKDLRHLCTLTIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEA 2170
            +ERR+DLR+LC  TIDPSTATDLDDALSV+++S   FR+GVHIAD SYFVLPD  LD EA
Sbjct: 461  IERRRDLRNLCIFTIDPSTATDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREA 520

Query: 2169 QTRSTSVYLRRRKIPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIR 1990
            Q+RSTSVYL + K+PMLP LLSEN+GSL+PGVDRLA+SI +D NLAGDVVDRWIGRTVI+
Sbjct: 521  QSRSTSVYLLQHKLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQ 580

Query: 1989 SCCKLSYQHAQYIIDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENR 1810
            SCCKLSY+HAQ IIDG+ DVE                    VI S+K L  ISK L+ NR
Sbjct: 581  SCCKLSYEHAQGIIDGMFDVE--------------------VIRSIKYLYAISKTLRANR 620

Query: 1809 YRDGAVYLESSKPFCLFDECGIPYDSRLSQQTESDFLVEEFMLLANKTAAEIISRAYPDC 1630
            + DGA+ L+ +K   LFDE G                          TAAEIISRA+PD 
Sbjct: 621  FNDGALLLDGAKVILLFDEHG--------------------------TAAEIISRAFPDN 654

Query: 1629 ALLRRHPEPNARKLKEFELFWLKHGLELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISY 1450
            ALLRRHPEPN RKL+EFE F  KHGLELDTSSSGQFN SL +++EKLKND VL+DIL+SY
Sbjct: 655  ALLRRHPEPNLRKLREFEAFCSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSY 714

Query: 1449 ASRPMNSAAYFCTGDFRDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEE 1270
            ASRPM  A YFC+GD +D +NEW+HYALA+PLYTHFTSPLRRYPDI+V RTL+AAIEAEE
Sbjct: 715  ASRPMQLATYFCSGDLKDNKNEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEE 774

Query: 1269 RYLQQQTAMSKCINGEDIGRKCFSSLYFDTHSADSKECREALAATALNHRVPGMEKIAEI 1090
             YL+    + K  NGE++ R+CF+ ++FD ++A+S E ++AL+  A  HR+P  E +A++
Sbjct: 775  LYLKHGAKIQKVKNGEEM-RRCFTGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADV 833

Query: 1089 AAYCNERRQVIRHAEDAGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRI 910
             AYCNER+   RHA+D   +LYMW LLKKKE L++EARVLGLGP+FMSIYIH L IERRI
Sbjct: 834  VAYCNERKLASRHAKDGCERLYMWVLLKKKEVLLSEARVLGLGPRFMSIYIHKLGIERRI 893

Query: 909  HYDDVDGLTVEWLEATSTLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGELFMH 730
            +YD+V+GLTVEWL+ATSTLV+NL  N+ S  +G+  ++R LEDVA VI  C+L+ E+   
Sbjct: 894  YYDEVEGLTVEWLDATSTLVVNLSTNKCSRWRGNQGKYRQLEDVAWVIRPCNLKQEV--- 950

Query: 729  DNNGKEVVMEVGSEGIVHKDDGPIDKPGISGINEVDPAAFPLTVRILSTIHVALHAIGGG 550
                                D  + + G+   NE+DP  FPLTVR LSTI V LHA+GG 
Sbjct: 951  --------------------DACMSESGVPDANEIDPLFFPLTVRTLSTIPVVLHAVGGD 990

Query: 549  DGPLDIGARLYMCSY 505
            DGPLDIGARLYM SY
Sbjct: 991  DGPLDIGARLYMNSY 1005


>ref|XP_002284419.2| PREDICTED: DIS3-like exonuclease 2-like [Vitis vinifera]
          Length = 1131

 Score =  956 bits (2472), Expect = 0.0
 Identities = 492/788 (62%), Positives = 607/788 (77%), Gaps = 5/788 (0%)
 Frame = -3

Query: 2853 KICALVSAFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTFVS 2674
            KICA +++FPSKRPTG VVAII++SPRR A+VGFL V QW  S     +K T  NKT++S
Sbjct: 344  KICAAINSFPSKRPTGSVVAIIERSPRRVAVVGFLSVKQWL-SSRVLHRKGTKMNKTYLS 402

Query: 2673 YSNQEFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDA---MELVGVRIENWREDSLLP 2503
             S+ E+I+L P D KFPKM+V ++ L + IKKRL   DA   MELV  +I +W E+S LP
Sbjct: 403  LSDSEYIQLTPTDPKFPKMVVPVKGLSDCIKKRLEDGDASMEMELVAAQISDWGEESSLP 462

Query: 2502 HACVMHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEELERRKDLRH 2323
             A VMH FGRGGEIEP +AAILFEN+I  +EFSPESLS LP  PW+VP EE+ERR+DLR+
Sbjct: 463  LAHVMHIFGRGGEIEPRIAAILFENAIRPSEFSPESLSCLPHIPWKVPQEEIERRRDLRN 522

Query: 2322 LCTLTIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSVYL 2143
            LC  TIDPSTATDLDDALSV+++S   FR+GVHIAD SYFVLPD  LD EAQ+RSTSVYL
Sbjct: 523  LCIFTIDPSTATDLDDALSVEKLSGGNFRVGVHIADASYFVLPDGVLDREAQSRSTSVYL 582

Query: 2142 RRRKIPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSYQH 1963
             + K+PMLP LLSEN+GSL+PGVDRLA+SI +D NLAGDVVDRWIGRTVI+SCCKLSY+H
Sbjct: 583  LQHKLPMLPPLLSENLGSLIPGVDRLAFSIFWDINLAGDVVDRWIGRTVIQSCCKLSYEH 642

Query: 1962 AQYIIDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENRYRDGAVYLE 1783
            AQ IIDG+ DVE    + +  P+++G F   +VI S+K L  ISK L+ NR+ DGA+ L+
Sbjct: 643  AQGIIDGMFDVEGSKILGNDCPQLHGHFKLPEVIRSIKYLYAISKTLRANRFNDGALLLD 702

Query: 1782 SSKPFCLFDECGIPYDSRLSQQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEP 1603
             +K   LFDE G+PYDS  S + +S+ LVEEFMLLANKTAAEIISRA+PD ALLRRHPEP
Sbjct: 703  GAKVILLFDEHGVPYDSTFSVRKDSNSLVEEFMLLANKTAAEIISRAFPDNALLRRHPEP 762

Query: 1602 NARKLKEFELFWLKHGLELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAA 1423
            N RKL+EFE F  KHGLELDTSSSGQFN SL +++EKLKND VL+DIL+SYASRPM  A 
Sbjct: 763  NLRKLREFEAFCSKHGLELDTSSSGQFNHSLEQIREKLKNDSVLFDILLSYASRPMQLAT 822

Query: 1422 YFCTGDFRDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAM 1243
            YFC+GD +D +NEW+HYALA+PLYTHFTSPLRRYPDI+V RTL+AAIEAEE YL+    +
Sbjct: 823  YFCSGDLKDNKNEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAAIEAEELYLKHGAKI 882

Query: 1242 SKCINGEDIGRKCFSSLYFDTHSADSKECREALAATALNHRVPGMEKIAEIAAYCNERRQ 1063
             K  NGE++ R+CF+ ++FD ++A+S E ++AL+  A  HR+P  E +A++ AYCNER+ 
Sbjct: 883  QKVKNGEEM-RRCFTGIHFDKNAAESVEGQKALSVAASKHRLPCTEILADVVAYCNERKL 941

Query: 1062 VIRHAEDAGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLT 883
              RHA+D   +LYMW LLKKKE L++EARVLGLGP+FMSIYIH L IERRI+YD+V+GLT
Sbjct: 942  ASRHAKDGCERLYMWVLLKKKEVLLSEARVLGLGPRFMSIYIHKLGIERRIYYDEVEGLT 1001

Query: 882  VEWLEATSTLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGEL-FMHDNNGKEVV 706
            VEWL+ATSTLV+NL  N+ S  +G+  ++R LEDVA VI  C+L+ E+    D   +   
Sbjct: 1002 VEWLDATSTLVVNLSTNKCSRWRGNQGKYRQLEDVAWVIRPCNLKQEVDAFGDTVNEWGA 1061

Query: 705  MEVGSE-GIVHKDDGPIDKPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIG 529
              VG +  +       + + G+   NE+DP  FPLTVR LSTI V LHA+GG DGPLDIG
Sbjct: 1062 TTVGRDASVASLRPRCMSESGVPDANEIDPLFFPLTVRTLSTIPVVLHAVGGDDGPLDIG 1121

Query: 528  ARLYMCSY 505
            ARLYM SY
Sbjct: 1122 ARLYMNSY 1129



 Score =  108 bits (271), Expect = 7e-21
 Identities = 58/107 (54%), Positives = 78/107 (72%)
 Frame = -3

Query: 3240 WSPQLVNAAIQNAHVFVAAFRVNAHNRLEAYCTIDGLPIDVLISGGAAQNRAVEGDLVAV 3061
            WS ++VN A++  +VF A+FRVNA+NRLEAYCTI+G+  DVLISG A+QNRAVEGD+VAV
Sbjct: 170  WSTEVVNEALEKGNVFRASFRVNAYNRLEAYCTIEGVKTDVLISGLASQNRAVEGDIVAV 229

Query: 3060 QLDSLSLWTRLKGSAGHTKNCTPLDGLVLLAKEVQGVGENCNLKEKV 2920
            ++D  SLW+R+KGS     N    +   LL+ +V  VG++   K KV
Sbjct: 230  KVDPFSLWSRMKGSTVFPNNAGLTEDHNLLS-DVTFVGDSWKGKGKV 275


>ref|XP_004140974.1| PREDICTED: DIS3-like exonuclease 2-like [Cucumis sativus]
          Length = 1125

 Score =  932 bits (2408), Expect = 0.0
 Identities = 511/967 (52%), Positives = 653/967 (67%), Gaps = 53/967 (5%)
 Frame = -3

Query: 3240 WSPQLVNAAIQNAHVFVAAFRVNAHNRLEAYCTIDGLPIDVLISGGAAQNRAVEGDLVAV 3061
            WS   VN  +Q   +F A FRVNAHNRLEAYC IDGLPIDVLI+G A+QNRAVEGD+VA+
Sbjct: 172  WSVDDVNEGLQKGGIFKALFRVNAHNRLEAYCKIDGLPIDVLINGIASQNRAVEGDIVAI 231

Query: 3060 QLDSLSLWTRLKGSAGHTKNCTPLDGLVLLA----------------------------- 2968
            +LD  + WT++KG++    N   ++   L A                             
Sbjct: 232  KLDPFTSWTKMKGTSEAHNNMHSMEDANLPAELTEKNDHNCKGKNKVDADVKSDSFRSTS 291

Query: 2967 ----------KEVQGVG--------ENCNLKEKVXXXXXXXXXXXXXXXXXXXPIGKICA 2842
                      K + GV         E C++ E +                    IG+ICA
Sbjct: 292  LPDKRCCSEDKVLDGVACDVLLSNYEQCDINE-LSVVNPSQAHHSSNQDDVSKAIGRICA 350

Query: 2841 LVSAFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTFVSYSNQ 2662
            L++ +P+KRPTGRVV I++KS  R+ +VG L V ++  S  E + KE+ ++    S  N 
Sbjct: 351  LINLYPAKRPTGRVVTILEKSRLRENVVGHLNVKKFL-SFQEFYVKESTKSCLSPS-QNC 408

Query: 2661 EFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDAM---ELVGVRIENWREDSLLPHACV 2491
             +++L+PNDA+FP M+V   DLP  IKKRL   D     ELV  RI  W ++S  P A V
Sbjct: 409  GYVQLMPNDARFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAARIYEWVKESSSPRAHV 468

Query: 2490 MHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEELERRKDLRHLCTL 2311
            +H  GRG E+E H+ AILFEN+I   EFS +SLS +P+ PW++P EEL+ R+D+R+LC  
Sbjct: 469  LHVLGRGNEVESHIDAILFENAIRTCEFSQDSLSCVPQTPWKIPPEELQCRRDIRNLCIF 528

Query: 2310 TIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSVYLRRRK 2131
            TIDPS+A+DLDDALSVQR+++ IFR+G+HIADVSYFVLPDT LD EAQ RSTSVYL +RK
Sbjct: 529  TIDPSSASDLDDALSVQRLANGIFRVGIHIADVSYFVLPDTALDKEAQIRSTSVYLLQRK 588

Query: 2130 IPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSYQHAQYI 1951
            IPMLP LLSE+IGSL PGVDRLA+S+  D N  GDV D WI RTVI  CCKLSY+HAQ I
Sbjct: 589  IPMLPPLLSESIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERTVICCCCKLSYEHAQDI 648

Query: 1950 IDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENRYRDGAVYLESSKP 1771
            IDGL+D +  +   +  P+++GQF   DVI SVK+L EISK +KE R+R+GA+ LE+SK 
Sbjct: 649  IDGLIDSDSSELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVKEKRFRNGALRLENSKL 708

Query: 1770 FCLFDECGIPYDSRLSQQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEPNARK 1591
              L+DE GIPYDS   +Q +S+FLVEEFMLLAN+T AE+ISR +PD ALLRRHPEP  RK
Sbjct: 709  IYLYDEYGIPYDSMFYEQKDSNFLVEEFMLLANRTVAEVISRTFPDSALLRRHPEPMLRK 768

Query: 1590 LKEFELFWLKHGLELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAAYFCT 1411
            L+EFE F  KHG ELDTSSS  F  SL +++ +L++DP+L+DILISYA+RPM  A YFC+
Sbjct: 769  LREFETFCSKHGFELDTSSSVHFQQSLEQIRIELQDDPLLFDILISYATRPMQLATYFCS 828

Query: 1410 GDFRDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAMSKCI 1231
            G+ +D E   +HYALA+PLYTHFTSPLRRYPDIVV RTL+AAIEAE+ YL+ +  + K  
Sbjct: 829  GELKDGETR-SHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQKVN 887

Query: 1230 NGEDIGRKCFSSLYFDTHSADSKECREALAATALNHRVPGMEKIAEIAAYCNERRQVIRH 1051
            + E+   +CF+ +YFD  +ADS E REAL++ AL H VP  + + ++A +CN+R+   +H
Sbjct: 888  SNEE--TRCFTGIYFDKDAADSLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLASKH 945

Query: 1050 AEDAGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLTVEWL 871
              D   KLYMWALLKKK+ L ++ARVLGLGP+FMS+YI  LAIERRI+YD+V+GL VEWL
Sbjct: 946  VADGIEKLYMWALLKKKKILFSDARVLGLGPRFMSVYIQKLAIERRIYYDEVEGLAVEWL 1005

Query: 870  EATSTLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCD---LEGELFMHDNNGKEVVME 700
            E TSTLVL    +RRS R     +++ LEDVALVI+ CD    E  L +  N G      
Sbjct: 1006 ETTSTLVLRFFCSRRSHRSRGSVKWKALEDVALVISPCDQNVKERTLGVSSNGG----AS 1061

Query: 699  VGSEGIVHKDDGPIDKPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIGARL 520
             G   +V +D         +G   VDPA FPLTVR+LSTI VALHA+GG DGP+DIG RL
Sbjct: 1062 KGGSAVVEQDSNLKSHVSDTG---VDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRL 1118

Query: 519  YMCSYLR 499
            YM SYLR
Sbjct: 1119 YMSSYLR 1125


>ref|XP_004160827.1| PREDICTED: LOW QUALITY PROTEIN: DIS3-like exonuclease 2-like [Cucumis
            sativus]
          Length = 1159

 Score =  930 bits (2403), Expect = 0.0
 Identities = 511/967 (52%), Positives = 653/967 (67%), Gaps = 53/967 (5%)
 Frame = -3

Query: 3240 WSPQLVNAAIQNAHVFVAAFRVNAHNRLEAYCTIDGLPIDVLISGGAAQNRAVEGDLVAV 3061
            WS   VN  +Q   +F A FRVNAHNRLEAYC IDGLPIDVLI+G A+QNRAVEGD+VA+
Sbjct: 207  WSVDDVNEGLQKGGIFKALFRVNAHNRLEAYCKIDGLPIDVLINGIASQNRAVEGDIVAI 266

Query: 3060 QLDSLSLWTRLKGSAGHTKNCTPLDGLVLLA----------------------------- 2968
            +LD  + WT++KG++    N   ++   L A                             
Sbjct: 267  KLDPFTSWTKMKGTSEAHNNMHSMEDANLPAELTEKNDHNCKGKNKVDADVKSDSFRSTS 326

Query: 2967 ----------KEVQGVG--------ENCNLKEKVXXXXXXXXXXXXXXXXXXXPIGKICA 2842
                      K + GV         E C++ E +                    IG+ICA
Sbjct: 327  LPDKRCCSEDKVLDGVACDVLLSNYEQCDINE-LSVVNPSQAHHSSNQDDVSKAIGRICA 385

Query: 2841 LVSAFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTFVSYSNQ 2662
            L++ +P+KRPTGRVV I++KS  R+ +VG L V ++  S  E + KE+ ++    S  N 
Sbjct: 386  LINLYPAKRPTGRVVTILEKSRLRENVVGHLNVKKFL-SFQEFYVKESTKSCLSPS-QNC 443

Query: 2661 EFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDAM---ELVGVRIENWREDSLLPHACV 2491
             +++L+PNDA+FP M+V   DLP  IKKRL   D     ELV  RI  W ++S  P A V
Sbjct: 444  GYVQLMPNDARFPIMMVLAGDLPNCIKKRLDNGDVTVENELVAARIYEWVKESSSPRAHV 503

Query: 2490 MHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEELERRKDLRHLCTL 2311
            +H  GRG E+E H+ AILFEN+    EFS +SLS +P+ PW++P EEL+ R+D+R+LC  
Sbjct: 504  LHVLGRGNEVESHIDAILFENAFRTCEFSQDSLSCVPQTPWKIPPEELQCRRDIRNLCIF 563

Query: 2310 TIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSVYLRRRK 2131
            TIDPS+A+DLDDALSVQR+++ IFR+G+HIADVSYFVLPDT LD EAQ RSTSVYL +RK
Sbjct: 564  TIDPSSASDLDDALSVQRLANGIFRVGIHIADVSYFVLPDTALDKEAQIRSTSVYLLQRK 623

Query: 2130 IPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSYQHAQYI 1951
            IPMLP LLSE+IGSL PGVDRLA+S+  D N  GDV D WI RTVI  CCKLSY+HAQ I
Sbjct: 624  IPMLPPLLSESIGSLNPGVDRLAFSLFLDINSCGDVKDFWIERTVICCCCKLSYEHAQDI 683

Query: 1950 IDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENRYRDGAVYLESSKP 1771
            IDGL+D +  +   +  P+++GQF   DVI SVK+L EISK +KE R+R+GA+ LE+SK 
Sbjct: 684  IDGLIDSDSSELFGNNCPQLHGQFTWHDVISSVKLLHEISKTVKEKRFRNGALRLENSKL 743

Query: 1770 FCLFDECGIPYDSRLSQQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHPEPNARK 1591
              L+DE GIPYDS   +Q +S+FLVEEFMLLAN+T AE+ISR +PD ALLRRHPEP  RK
Sbjct: 744  IYLYDEYGIPYDSMFYEQKDSNFLVEEFMLLANRTVAEVISRTFPDSALLRRHPEPMLRK 803

Query: 1590 LKEFELFWLKHGLELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNSAAYFCT 1411
            L+EFE F  KHG ELDTSSS  F  SL +++ +L++DP+L+DILISYA+RPM  A YFC+
Sbjct: 804  LREFETFCSKHGFELDTSSSVHFQQSLEQIRIELQDDPLLFDILISYATRPMQLATYFCS 863

Query: 1410 GDFRDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQTAMSKCI 1231
            G+ +D E   +HYALA+PLYTHFTSPLRRYPDIVV RTL+AAIEAE+ YL+ +  + K  
Sbjct: 864  GELKDGETR-SHYALAVPLYTHFTSPLRRYPDIVVHRTLAAAIEAEKMYLKHKGVIQKVN 922

Query: 1230 NGEDIGRKCFSSLYFDTHSADSKECREALAATALNHRVPGMEKIAEIAAYCNERRQVIRH 1051
            + E+   +CF+ +YFD  +ADS E REAL++ AL H VP  + + ++A +CN+R+   +H
Sbjct: 923  SNEE--TRCFTGIYFDKDAADSLEGREALSSAALKHGVPCSKLLLDVALHCNDRKLASKH 980

Query: 1050 AEDAGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDGLTVEWL 871
              D   KLYMWALLKKK+ L ++ARVLGLGP+FMS+YI  LAIERRI+YD+V+GL VEWL
Sbjct: 981  VADGIEKLYMWALLKKKKILFSDARVLGLGPRFMSVYIQKLAIERRIYYDEVEGLAVEWL 1040

Query: 870  EATSTLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCD---LEGELFMHDNNGKEVVME 700
            E TSTLVL  C +RRS R     +++ LEDVALVI+ CD    E  L +  N G      
Sbjct: 1041 ETTSTLVLRFC-SRRSHRSRGSVKWKALEDVALVISPCDQNVKERTLGVSSNGG----AS 1095

Query: 699  VGSEGIVHKDDGPIDKPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDIGARL 520
             G   +V +D         +G   VDPA FPLTVR+LSTI VALHA+GG DGP+DIG RL
Sbjct: 1096 KGGSAVVEQDSNLKSHVSDTG---VDPAIFPLTVRLLSTIPVALHAVGGDDGPIDIGVRL 1152

Query: 519  YMCSYLR 499
            YM SYLR
Sbjct: 1153 YMSSYLR 1159


>ref|XP_002513779.1| RNA binding protein, putative [Ricinus communis]
            gi|223546865|gb|EEF48362.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1099

 Score =  914 bits (2361), Expect = 0.0
 Identities = 466/790 (58%), Positives = 595/790 (75%), Gaps = 4/790 (0%)
 Frame = -3

Query: 2859 IGKICALVSAFPSKRPTGRVVAIIQKSPRRDALVGFLGVSQWRPSGGEGFQKETNQNKTF 2680
            +G++C ++S+ P+KRPTGRVVAII++SPRRDA++GFL V QW     E  +K++ +NK  
Sbjct: 317  VGRLCTMISSHPTKRPTGRVVAIIERSPRRDAIIGFLNVKQWFYCR-EACKKDSKKNKNS 375

Query: 2679 VSYSNQEFIELIPNDAKFPKMLVCLRDLPEYIKKRLMKSDA---MELVGVRIENWREDSL 2509
             S S++E+I+L+P D KFPKM+V    LP+ IKKRL   DA   MELV  +I+NW ++S 
Sbjct: 376  SSISDREYIQLMPTDPKFPKMMVLASSLPDSIKKRLEGGDATVEMELVAAQIDNWDDESP 435

Query: 2508 LPHACVMHSFGRGGEIEPHLAAILFENSICVTEFSPESLSNLPKFPWEVPAEELERRKDL 2329
             PHA V   FGRG E+EP L+AIL+EN+IC ++FSPESLS +P   WEVPAEE+ RRKDL
Sbjct: 436  SPHAHVSRIFGRGSELEPQLSAILYENTICYSDFSPESLSCIPCDSWEVPAEEIRRRKDL 495

Query: 2328 RHLCTLTIDPSTATDLDDALSVQRVSDSIFRIGVHIADVSYFVLPDTPLDIEAQTRSTSV 2149
            R+LC  TIDPSTATDLDDALSV+R+ + I R+GVHIADVSYFVLPD+ LD EAQ RSTSV
Sbjct: 496  RNLCIFTIDPSTATDLDDALSVERLPNGILRVGVHIADVSYFVLPDSALDKEAQARSTSV 555

Query: 2148 YLRRRKIPMLPALLSENIGSLVPGVDRLAYSIMFDCNLAGDVVDRWIGRTVIRSCCKLSY 1969
            YL R K+PMLP LLSEN+GSL PGVDRLA++I ++ N  GDV DRWIGRTVI+SCCKLSY
Sbjct: 556  YLLRGKLPMLPPLLSENLGSLNPGVDRLAFTIFWELNSTGDVTDRWIGRTVIQSCCKLSY 615

Query: 1968 QHAQYIIDGLMDVERHDTVVSQFPEVYGQFGKVDVIGSVKILTEISKRLKENRYRDGAVY 1789
            QHAQ ++DG++  E  +T  +  P++YG F   DVI SVK L EISK L+E R+ DGA+ 
Sbjct: 616  QHAQEMVDGVIREEACNTFGNSLPQLYGPFDWSDVIRSVKSLNEISKTLREKRFNDGALQ 675

Query: 1788 LESSKPFCLFDECGIPYDSRLSQQTESDFLVEEFMLLANKTAAEIISRAYPDCALLRRHP 1609
            LESSK   LFDE GIPYDS L  + +SDFLVEEFMLLAN+TAAE+ISRA+PD ALLRRHP
Sbjct: 676  LESSKIGFLFDEYGIPYDSVLCGRKDSDFLVEEFMLLANRTAAEVISRAFPDSALLRRHP 735

Query: 1608 EPNARKLKEFELFWLKHGLELDTSSSGQFNLSLGKVKEKLKNDPVLYDILISYASRPMNS 1429
             PN RKL+EFE F  KHGL+LD+SSSG F+ SL  ++ KLK+D VL  IL+SYASRPM  
Sbjct: 736  APNMRKLREFEAFCCKHGLQLDSSSSGNFHQSLECIRGKLKDDSVLCGILMSYASRPMQL 795

Query: 1428 AAYFCTGDFRDRENEWAHYALAMPLYTHFTSPLRRYPDIVVQRTLSAAIEAEERYLQQQT 1249
            A YFC+G  +D  N+W HYALA+ LYTHFTSPLRRYPDI+V RTL+AAIEAEE Y++ + 
Sbjct: 796  ATYFCSGVMKDNMNDWGHYALAVALYTHFTSPLRRYPDIIVHRTLAAAIEAEELYMRSRR 855

Query: 1248 AMSKCINGEDIGRKCFSSLYFDTHSADSKECREALAATALNHRVPGMEKIAEIAAYCNER 1069
               K   G+ + R CF+ +YFD  +A+S E +EAL+A A  HR+P  E +A + AYCN+R
Sbjct: 856  ISCKAGMGDKVMR-CFTGIYFDKDAAESVEGKEALSAAASKHRIPCTESLANVVAYCNDR 914

Query: 1068 RQVIRHAEDAGAKLYMWALLKKKETLVAEARVLGLGPKFMSIYIHNLAIERRIHYDDVDG 889
            +   RH +DA  KLYMWALLK+KE L+++ARVLGLGP+FMSIYI  LAIERRI+Y++V+G
Sbjct: 915  KLASRHVKDACDKLYMWALLKRKEVLLSDARVLGLGPRFMSIYIQKLAIERRIYYEEVEG 974

Query: 888  LTVEWLEATSTLVLNLCANRRSLRKGSYCRFRPLEDVALVINSCDLEGELFMHDNNGKEV 709
            LTVEWLEATSTLVLNLC+ +R+ R+     +R L++ A V++ C L+ E  M   + KE 
Sbjct: 975  LTVEWLEATSTLVLNLCSYKRAFRRSGSGFYRELDEFAWVVSPCSLKLEADMVGESPKEC 1034

Query: 708  -VMEVGSEGIVHKDDGPIDKPGISGINEVDPAAFPLTVRILSTIHVALHAIGGGDGPLDI 532
             + +  + G   +   PI +      +++DP  FP+TVR+LSTI VALHA+GG D P++I
Sbjct: 1035 RIADSDNNGKASQHIDPISE------SKIDPVVFPITVRLLSTIPVALHAVGGDDRPIEI 1088

Query: 531  GARLYMCSYL 502
            G R++  SYL
Sbjct: 1089 GVRVFASSYL 1098



 Score = 95.1 bits (235), Expect = 1e-16
 Identities = 43/76 (56%), Positives = 56/76 (73%)
 Frame = -3

Query: 3240 WSPQLVNAAIQNAHVFVAAFRVNAHNRLEAYCTIDGLPIDVLISGGAAQNRAVEGDLVAV 3061
            WS + ++ A++    F A F VNAHNRLEAYC I+G+  DVLISG A QNRAVEGD+V +
Sbjct: 141  WSIEAIDEALEKGDAFKAVFHVNAHNRLEAYCKIEGVSTDVLISGLAVQNRAVEGDMVVI 200

Query: 3060 QLDSLSLWTRLKGSAG 3013
            ++D L  WT++KGS G
Sbjct: 201  KVDPLPCWTKMKGSNG 216