BLASTX nr result

ID: Coptis24_contig00008549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008549
         (1844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containin...   656   0.0  
ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|2...   614   e-173
ref|XP_002528658.1| conserved hypothetical protein [Ricinus comm...   606   e-171
ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containin...   596   e-168
ref|XP_003545729.1| PREDICTED: zinc finger CCCH domain-containin...   560   e-157

>ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis
            vinifera] gi|297736083|emb|CBI24121.3| unnamed protein
            product [Vitis vinifera]
          Length = 535

 Score =  656 bits (1693), Expect = 0.0
 Identities = 313/434 (72%), Positives = 355/434 (81%), Gaps = 5/434 (1%)
 Frame = -2

Query: 1618 DVSASAGGYDSVLAGIKRQTEAFYHQSVLGNHNSLGQTEALFSTNTLAKRPRFESATNLP 1439
            DV AS    D ++AG+KR +EA YH SVLG HN++GQ+EA FSTN+LAKRPRFESA+NLP
Sbjct: 101  DVGASV---DPLVAGLKRSSEALYHPSVLGAHNTIGQSEAWFSTNSLAKRPRFESASNLP 157

Query: 1438 IYPQRPGAKDCAHYMLTRTCKFADSCKFDHPIWVPDGGIPDWKEVPLVASSEALPERPGE 1259
            IYPQRPG KDCAHYMLTRTCKF DSCKFDHPIWVP+GGIPDWKEVP+VA++E LP+RPGE
Sbjct: 158  IYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPIVAANEFLPQRPGE 217

Query: 1258 PDCPYFLKTQKCKFGFKCKFNHPKDKIESSNALAPVDASVLPERPSEPPCSFYMKTGKCK 1079
            PDCPYF+KTQKCKFG KCKFNHPKD+I S  A    D  VLPERPSE PC+FY+KTGKCK
Sbjct: 218  PDCPYFMKTQKCKFGHKCKFNHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKTGKCK 277

Query: 1078 FGATCKFHHPKDIQIPPSIQENGNGVENLSAAVKVESAET-----GDTKSFKPFVPSTPA 914
            FGATCKFHHPKDIQI  + + N +G          E AET     G T   K  V  TPA
Sbjct: 278  FGATCKFHHPKDIQIASTGKNNADG----------EQAETGAKGAGTTGDVKLPVSVTPA 327

Query: 913  LLHNSKGLPVRLGEVDCPFYLKTGSCKYGATCRYNHPDRSVINPPVATSLSNAVINSPAA 734
            L+HNSKGLP+RLGEVDCPFYLKTGSCKYGATCRYNHPDR+ INPP A ++ +A++ SPAA
Sbjct: 328  LVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPP-AAAIGHAIVASPAA 386

Query: 733  SLNFGVINPAATILPSIDPRLAQTTLGVNPPFYPQRPGQMECDFYMKTGECKFGESCRFH 554
            +LN GV+NP  +IL  IDPRL+Q T+GV P  YPQRPGQMECDFYMKTGECKFGE C+FH
Sbjct: 387  NLNVGVVNPVTSILHPIDPRLSQ-TMGVGPTIYPQRPGQMECDFYMKTGECKFGERCKFH 445

Query: 553  HPVDRSAPTPSMTKQALQQNVKLTLAGFPRREGTIICPFYLKTGTCKYGVTCRFDHPPPG 374
            HP+DRSAPT +     LQQN++LTLAGFPRREGTIICPFYLKTGTCKYGVTC+FDHPPPG
Sbjct: 446  HPIDRSAPTAT----KLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDHPPPG 501

Query: 373  EAIAMATVQGTAGS 332
            E +AMAT QG + S
Sbjct: 502  EVMAMATSQGASTS 515



 Score =  147 bits (370), Expect = 1e-32
 Identities = 96/299 (32%), Positives = 133/299 (44%), Gaps = 28/299 (9%)
 Frame = -2

Query: 1141 VLPERPSEPPCSFYMKTGKCKFGATCKFHHPKDIQIPPSIQENGNGVENLSAAVKVESAE 962
            + P+RP E  C+ YM T  CKFG +CKF HP  I +P                       
Sbjct: 158  IYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP--IWVPE---------------------- 193

Query: 961  TGDTKSFKPFVPSTPALLHNSKGLPVRLGEVDCPFYLKTGSCKYGATCRYNHPDRSVINP 782
             G    +K  VP   A    ++ LP R GE DCP+++KT  CK+G  C++NHP   +I+ 
Sbjct: 194  -GGIPDWKE-VPIVAA----NEFLPQRPGEPDCPYFMKTQKCKFGHKCKFNHPKDQIIS- 246

Query: 781  PVATSLSNAVINSPAASLNFGVINPAATILPSIDPRLAQTTLGVNPPFYPQRPGQMECDF 602
                      + +P         N    +LP                   +RP ++ C F
Sbjct: 247  ----------LGAPE--------NTDVFVLP-------------------ERPSELPCAF 269

Query: 601  YMKTGECKFGESCRFHHPVDRSAPTPSMTKQALQQ------------NVKLTLA------ 476
            Y+KTG+CKFG +C+FHHP D    +        +Q            +VKL ++      
Sbjct: 270  YVKTGKCKFGATCKFHHPKDIQIASTGKNNADGEQAETGAKGAGTTGDVKLPVSVTPALV 329

Query: 475  ----GFPRREGTIICPFYLKTGTCKYGVTCRFDHP------PPGEAIAMATVQGTAGSV 329
                G P R G + CPFYLKTG+CKYG TCR++HP      PP  AI  A V   A ++
Sbjct: 330  HNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHAIVASPAANL 388


>ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|222864136|gb|EEF01267.1|
            predicted protein [Populus trichocarpa]
          Length = 532

 Score =  614 bits (1583), Expect = e-173
 Identities = 294/461 (63%), Positives = 349/461 (75%), Gaps = 8/461 (1%)
 Frame = -2

Query: 1711 LYNNQADPAFRYN---DIIRYGGAMPPP--PSWSTPDVSASAGGYDSVLAGIKRQTEAFY 1547
            +Y  Q+D A RY+    I     A   P   SW+ P         +S++ G+KR  E  Y
Sbjct: 69   MYLKQSDTALRYSVDRGIASASAAATSPHFSSWTPPPGVDVPPAVESLVPGLKRTPEVLY 128

Query: 1546 HQSVLGNHNSLGQTEALFSTNTLAKRPRFESATNLPIYPQRPGAKDCAHYMLTRTCKFAD 1367
            H ++LG H+++GQ+E  +STN+LAKR RFE+ ++ PIYPQRPG KDCAHYMLTRTCKF D
Sbjct: 129  HPTLLGAHSTIGQSEDWYSTNSLAKRVRFETTSHFPIYPQRPGEKDCAHYMLTRTCKFGD 188

Query: 1366 SCKFDHPIWVPDGGIPDWKEVPLVASSEALPERPGEPDCPYFLKTQKCKFGFKCKFNHPK 1187
            +CKFDHP+WVP+GGIPDWKEVPL+A+SE  PERPGEPDCPYFLKTQ+CK+G  CKFNHPK
Sbjct: 189  TCKFDHPVWVPEGGIPDWKEVPLIATSETFPERPGEPDCPYFLKTQRCKYGLNCKFNHPK 248

Query: 1186 DKI---ESSNALAPVDASVLPERPSEPPCSFYMKTGKCKFGATCKFHHPKDIQIPPSIQE 1016
            +K+   +S N+      S LPERPSEPPC+FYMKTGKCKFGA+CKFHHPKDIQIP S   
Sbjct: 249  EKLSLGDSENS----SVSALPERPSEPPCAFYMKTGKCKFGASCKFHHPKDIQIPLSGLG 304

Query: 1015 NGNGVENLSAAVKVESAETGDTKSFKPFVPSTPALLHNSKGLPVRLGEVDCPFYLKTGSC 836
            N NGV+   + VK E   TGD      + P TPAL HNSKGLP+RLGEVDCPFYLKTGSC
Sbjct: 305  NDNGVQT-DSVVKNEGI-TGDVDVI--YSPVTPALHHNSKGLPIRLGEVDCPFYLKTGSC 360

Query: 835  KYGATCRYNHPDRSVINPPVATSLSNAVINSPAASLNFGVINPAATILPSIDPRLAQTTL 656
            KYGATCRYNHP+R+ INPP A ++ + ++    A+LNFGV NPAA+I  +IDPRL+   L
Sbjct: 361  KYGATCRYNHPERTAINPP-AAAIGHPIVAPSLANLNFGVFNPAASIYQTIDPRLSM--L 417

Query: 655  GVNPPFYPQRPGQMECDFYMKTGECKFGESCRFHHPVDRSAPTPSMTKQALQQNVKLTLA 476
            GV P FYPQRPGQ ECDFYMKTGECKFGE C+FHHP+DRSAPT    KQ  QQ VKLTLA
Sbjct: 418  GVGPTFYPQRPGQTECDFYMKTGECKFGERCKFHHPIDRSAPT---EKQIQQQTVKLTLA 474

Query: 475  GFPRREGTIICPFYLKTGTCKYGVTCRFDHPPPGEAIAMAT 353
            G PRREG + CP+Y+KTG CKYG TC+FDHPPPGE +A+AT
Sbjct: 475  GLPRREGAVHCPYYMKTGACKYGATCKFDHPPPGEVMAVAT 515


>ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis]
            gi|223531909|gb|EEF33724.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 500

 Score =  606 bits (1562), Expect = e-171
 Identities = 288/442 (65%), Positives = 339/442 (76%)
 Frame = -2

Query: 1657 GGAMPPPPSWSTPDVSASAGGYDSVLAGIKRQTEAFYHQSVLGNHNSLGQTEALFSTNTL 1478
            G    PPP    P  S        +LAG+KR +E  YH +V+G HN++GQTEA +STN L
Sbjct: 57   GAPWTPPPGVDVPPASIEP----HLLAGLKRSSEVLYHPTVMGAHNTIGQTEAWYSTNYL 112

Query: 1477 AKRPRFESATNLPIYPQRPGAKDCAHYMLTRTCKFADSCKFDHPIWVPDGGIPDWKEVPL 1298
             KR RFESA+N  IYPQRPG KDCAHYMLTRTCKF DSCKFDHP+WVP+GGIP+WKEVPL
Sbjct: 113  TKRSRFESASNYSIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPNWKEVPL 172

Query: 1297 VASSEALPERPGEPDCPYFLKTQKCKFGFKCKFNHPKDKIESSNALAPVDASVLPERPSE 1118
             A++E LPERPGEPDCPYFLKTQ+CK+G KCKFNHPKD++   ++ +  D   LPERPSE
Sbjct: 173  AATTEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSN-DVFALPERPSE 231

Query: 1117 PPCSFYMKTGKCKFGATCKFHHPKDIQIPPSIQENGNGVENLSAAVKVESAETGDTKSFK 938
            P C+FY KTG+CKFGATCKFHHPKDIQI    QEN N ++N +AA  +    TGD  + K
Sbjct: 232  PICAFYAKTGRCKFGATCKFHHPKDIQIALG-QENCNIMQNEAAA--MTHGTTGDVNAVK 288

Query: 937  PFVPSTPALLHNSKGLPVRLGEVDCPFYLKTGSCKYGATCRYNHPDRSVINPPVATSLSN 758
              +    ALLHNSKGLP+R GEVDCPFYLKTGSCKYGATCRYNHPDR+ INPP A ++ +
Sbjct: 289  ACISFNQALLHNSKGLPIRPGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPP-AAAIGH 347

Query: 757  AVINSPAASLNFGVINPAATILPSIDPRLAQTTLGVNPPFYPQRPGQMECDFYMKTGECK 578
             ++ SPAA+LN G INPAA+I  +I P  +   LGV P  YPQRPG  ECD+YMKTGECK
Sbjct: 348  PLLASPAANLNLGDINPAASIYQAIYPSFSSPMLGVGPTIYPQRPGHAECDYYMKTGECK 407

Query: 577  FGESCRFHHPVDRSAPTPSMTKQALQQNVKLTLAGFPRREGTIICPFYLKTGTCKYGVTC 398
            FGE CRFHHP+DRSAPT +   QA QQ VKLTLAG PRREG + CP+Y+KTGTCKYG TC
Sbjct: 408  FGERCRFHHPIDRSAPTAT---QAQQQAVKLTLAGLPRREGAVHCPYYMKTGTCKYGATC 464

Query: 397  RFDHPPPGEAIAMATVQGTAGS 332
            +FDHPPPGE +A+A+ QGT+ S
Sbjct: 465  KFDHPPPGEVMAIAS-QGTSTS 485


>ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
            [Cucumis sativus]
          Length = 527

 Score =  596 bits (1537), Expect = e-168
 Identities = 286/460 (62%), Positives = 344/460 (74%), Gaps = 1/460 (0%)
 Frame = -2

Query: 1711 LYNNQAD-PAFRYNDIIRYGGAMPPPPSWSTPDVSASAGGYDSVLAGIKRQTEAFYHQSV 1535
            +Y+ Q + P     DI+     +    SW    V+A+    DSV++GIKR ++  Y Q+V
Sbjct: 68   MYSTQKEGPMLSSADIVPRTSHLVSQFSWPGSHVAAAL---DSVVSGIKRSSDVLYDQTV 124

Query: 1534 LGNHNSLGQTEALFSTNTLAKRPRFESATNLPIYPQRPGAKDCAHYMLTRTCKFADSCKF 1355
            LG++N+LGQ+EA +++N+LAKRPRFES +NLP+YPQRPG KDCAHYMLTRTCKF DSCKF
Sbjct: 125  LGSYNTLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKF 184

Query: 1354 DHPIWVPDGGIPDWKEVPLVASSEALPERPGEPDCPYFLKTQKCKFGFKCKFNHPKDKIE 1175
            DHPIWVP+GGIPDWKEVP +A+SE LPER G+PDCPYFLKTQ+CKFG +CKFNHPKD+ +
Sbjct: 185  DHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSD 244

Query: 1174 SSNALAPVDASVLPERPSEPPCSFYMKTGKCKFGATCKFHHPKDIQIPPSIQENGNGVEN 995
            S  A    DAS LPERPSEP C+FY+KTG CKFG  CKFHHPKDIQI  S +E GN  + 
Sbjct: 245  SVGA-EKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQI-LSGEEYGNSEQT 302

Query: 994  LSAAVKVESAETGDTKSFKPFVPSTPALLHNSKGLPVRLGEVDCPFYLKTGSCKYGATCR 815
            L   VK E    GD K  KP +  +PA++HNSKGLP+R GEVDCPFYLKTGSCKYG TCR
Sbjct: 303  L--MVKTEE-RAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCR 359

Query: 814  YNHPDRSVINPPVATSLSNAVINSPAASLNFGVINPAATILPSIDPRLAQTTLGVNPPFY 635
            YNHPDR+ INP     +  A++++  A++N G +NP+  I  ++DPRL Q  LG     Y
Sbjct: 360  YNHPDRNAINPSTPAMVHPAMVST--ANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSIY 417

Query: 634  PQRPGQMECDFYMKTGECKFGESCRFHHPVDRSAPTPSMTKQALQQNVKLTLAGFPRREG 455
            PQRPGQ+ECDFYMKTG+CKFGE C+FHHP+DRSAP     KQ    NVKLTLAG PRRE 
Sbjct: 418  PQRPGQIECDFYMKTGDCKFGERCKFHHPIDRSAP-----KQGALHNVKLTLAGLPRREE 472

Query: 454  TIICPFYLKTGTCKYGVTCRFDHPPPGEAIAMATVQGTAG 335
             IICP+YLKTGTCKYG TC+FDHPPPGE + MA VQ   G
Sbjct: 473  AIICPYYLKTGTCKYGTTCKFDHPPPGEVMTMAAVQSAPG 512


>ref|XP_003545729.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
            [Glycine max]
          Length = 507

 Score =  560 bits (1442), Expect = e-157
 Identities = 261/414 (63%), Positives = 320/414 (77%)
 Frame = -2

Query: 1573 IKRQTEAFYHQSVLGNHNSLGQTEALFSTNTLAKRPRFESATNLPIYPQRPGAKDCAHYM 1394
            +KR +EA YH ++LG   ++GQ+EA +STN LAKRPR+ESA+N+ IYPQRPG KDCAHYM
Sbjct: 99   LKRSSEALYHPTILG---TIGQSEAWYSTNPLAKRPRYESASNMTIYPQRPGEKDCAHYM 155

Query: 1393 LTRTCKFADSCKFDHPIWVPDGGIPDWKEVPLVASSEALPERPGEPDCPYFLKTQKCKFG 1214
            LTRTCKF DSCKFDHP+WVP+GGIPDWKEVP V +SE  PERPGEPDCPYFLKTQ+CKFG
Sbjct: 156  LTRTCKFGDSCKFDHPVWVPEGGIPDWKEVPNVVTSETPPERPGEPDCPYFLKTQRCKFG 215

Query: 1213 FKCKFNHPKDKIESSNALAPVDASVLPERPSEPPCSFYMKTGKCKFGATCKFHHPKDIQI 1034
             KCKFNHPK   E+++      +S LPERPSEPPC+FYMKTGKC++G  CKFHHPKDIQI
Sbjct: 216  SKCKFNHPKVSSENADV-----SSGLPERPSEPPCAFYMKTGKCRYGTACKFHHPKDIQI 270

Query: 1033 PPSIQENGNGVENLSAAVKVESAETGDTKSFKPFVPSTPALLHNSKGLPVRLGEVDCPFY 854
              S   + N  +  + ++      TGDT+  K  +  +   L NSKGLPVRLGEVDCPFY
Sbjct: 271  QLSDDLSQNVAQTQTNSMM--GGATGDTQPIKSLISPS---LQNSKGLPVRLGEVDCPFY 325

Query: 853  LKTGSCKYGATCRYNHPDRSVINPPVATSLSNAVINSPAASLNFGVINPAATILPSIDPR 674
            +KTGSCKYG +CRYNHPDR+ INPP+A  L  +++ S AA+LN G++NPA +   + +PR
Sbjct: 326  MKTGSCKYGVSCRYNHPDRNAINPPIA-GLGASILPSSAANLNIGLLNPAVSAYQAFEPR 384

Query: 673  LAQTTLGVNPPFYPQRPGQMECDFYMKTGECKFGESCRFHHPVDRSAPTPSMTKQALQQN 494
            L+   +G+    YPQRPGQ+ECDFYMKTG CKFGE C++HHP+DRSA   S++KQA    
Sbjct: 385  LSNPMVGIAETIYPQRPGQIECDFYMKTGVCKFGERCKYHHPIDRSA--LSLSKQA---T 439

Query: 493  VKLTLAGFPRREGTIICPFYLKTGTCKYGVTCRFDHPPPGEAIAMATVQGTAGS 332
            VKLT AG PRREG +ICP+YLKTGTCK+G TC+FDHPPPGE + MA  QGT+ +
Sbjct: 440  VKLTPAGLPRREGDVICPYYLKTGTCKFGATCKFDHPPPGEVMEMAKSQGTSAN 493



 Score =  105 bits (262), Expect = 4e-20
 Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 35/212 (16%)
 Frame = -2

Query: 1468 PRFESATNLPIYPQRPGAKDCAHYMLTRTCKFADSCKFDHP------------------- 1346
            P  +++  LP+   R G  DC  YM T +CK+  SC+++HP                   
Sbjct: 305  PSLQNSKGLPV---RLGEVDCPFYMKTGSCKYGVSCRYNHPDRNAINPPIAGLGASILPS 361

Query: 1345 ------IWVPDGGIPDWKEV------PLVASSEAL-PERPGEPDCPYFLKTQKCKFGFKC 1205
                  I + +  +  ++        P+V  +E + P+RPG+ +C +++KT  CKFG +C
Sbjct: 362  SAANLNIGLLNPAVSAYQAFEPRLSNPMVGIAETIYPQRPGQIECDFYMKTGVCKFGERC 421

Query: 1204 KFNHPKDKIE---SSNALAPVDASVLPERPSEPPCSFYMKTGKCKFGATCKFHHPKDIQI 1034
            K++HP D+     S  A   +  + LP R  +  C +Y+KTG CKFGATCKF HP   ++
Sbjct: 422  KYHHPIDRSALSLSKQATVKLTPAGLPRREGDVICPYYLKTGTCKFGATCKFDHPPPGEV 481

Query: 1033 PPSIQENGNGVENLSAAVKVESAETGDTKSFK 938
                +  G            E AE GDT + +
Sbjct: 482  MEMAKSQGTSANG-------EEAE-GDTSALE 505


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