BLASTX nr result

ID: Coptis24_contig00008542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008542
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631484.1| PREDICTED: uncharacterized protein LOC100855...   131   7e-29
ref|XP_002279781.2| PREDICTED: uncharacterized protein LOC100257...   114   6e-24
ref|XP_002326486.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002436440.1| hypothetical protein SORBIDRAFT_10g002670 [S...   107   1e-21
ref|XP_004164618.1| PREDICTED: uncharacterized protein LOC101229...   106   2e-21

>ref|XP_003631484.1| PREDICTED: uncharacterized protein LOC100855014 [Vitis vinifera]
          Length = 203

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/82 (73%), Positives = 73/82 (89%)
 Frame = +2

Query: 59  DNNDPSNGVRSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSHYLDYSIIDNDE 238
           D++ P NG +S+  ESN+KA+LSAVEMQDQM+QFTH+M QKFLSG+D  YLDYS ID+DE
Sbjct: 121 DHDGPVNGSQSSDMESNQKATLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDYSKIDDDE 180

Query: 239 TLDDHWLREANHDAEEKYFADD 304
           TLDDHWLREAN+DAE+KYFA+D
Sbjct: 181 TLDDHWLREANYDAEDKYFAED 202


>ref|XP_002279781.2| PREDICTED: uncharacterized protein LOC100257446 [Vitis vinifera]
          Length = 309

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/85 (61%), Positives = 66/85 (77%)
 Frame = +2

Query: 50  EEPDNNDPSNGVRSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSHYLDYSIID 229
           EE +  +       +  ++ +  +LSAVEMQDQM+QFTH+M QKFLSG+D  YLDYS ID
Sbjct: 224 EEEEEEEEEEEKEEDEKQAGKATTLSAVEMQDQMDQFTHIMHQKFLSGEDRDYLDYSKID 283

Query: 230 NDETLDDHWLREANHDAEEKYFADD 304
           +DETLDDHWLREAN+DAE+KYFA+D
Sbjct: 284 DDETLDDHWLREANYDAEDKYFAED 308


>ref|XP_002326486.1| predicted protein [Populus trichocarpa] gi|222833808|gb|EEE72285.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score =  108 bits (271), Expect = 4e-22
 Identities = 52/88 (59%), Positives = 67/88 (76%)
 Frame = +2

Query: 47  VEEPDNNDPSNGVRSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSHYLDYSII 226
           V   + ++ S   +S+  E +E A+LSA EM D M QFT++M QKFL+G+D  +LDYS I
Sbjct: 216 VSSTEMSEDSKLAQSSKAEHDEAATLSAEEMGDMMGQFTYIMHQKFLAGEDHQHLDYSKI 275

Query: 227 DNDETLDDHWLREANHDAEEKYFADD*E 310
           D+DETLDDHWLREANHDAE+KYFA+D E
Sbjct: 276 DDDETLDDHWLREANHDAEDKYFAEDEE 303


>ref|XP_002436440.1| hypothetical protein SORBIDRAFT_10g002670 [Sorghum bicolor]
           gi|241914663|gb|EER87807.1| hypothetical protein
           SORBIDRAFT_10g002670 [Sorghum bicolor]
          Length = 324

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = +2

Query: 68  DPSNGVRSNGTESNEKASLSAVEMQDQMEQFTHVMQQKFLSGKDSHYLDYSIIDNDETLD 247
           + +NG  S  T SN+  +LS  EMQDQ+EQFT+VMQQKFLSG+D+ ++DYS IDNDE LD
Sbjct: 248 ESNNGGDSAATTSNQ--TLSFEEMQDQLEQFTYVMQQKFLSGEDTEHMDYSQIDNDEMLD 305

Query: 248 DHWLREANHDAEEKYFADD 304
           DHW REAN+DAEEKYF +D
Sbjct: 306 DHWSREANYDAEEKYFEED 324


>ref|XP_004164618.1| PREDICTED: uncharacterized protein LOC101229247 [Cucumis sativus]
          Length = 319

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 2/87 (2%)
 Frame = +2

Query: 50  EEPDNNDPSNGVRSNGTESNEK--ASLSAVEMQDQMEQFTHVMQQKFLSGKDSHYLDYSI 223
           EE   +   N   +NG +S E   ++LS  +MQDQM+QFT++M QKFL G+D+ +LDYS 
Sbjct: 233 EEVGEDTKGNNKLANGADSMEVILSTLSEADMQDQMDQFTYIMHQKFLLGEDNEHLDYSK 292

Query: 224 IDNDETLDDHWLREANHDAEEKYFADD 304
           IDNDETLDDHW+REAN DAEEKYF +D
Sbjct: 293 IDNDETLDDHWMREANDDAEEKYFDED 319


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