BLASTX nr result
ID: Coptis24_contig00008524
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008524 (1822 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y su... 187 8e-45 emb|CBI27842.3| unnamed protein product [Vitis vinifera] 174 9e-41 ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|2... 161 5e-37 ref|XP_003597551.1| Nuclear transcription factor Y subunit A-3 [... 156 2e-35 ref|XP_003597550.1| Nuclear transcription factor Y subunit A-3 [... 152 3e-34 >ref|XP_002278441.2| PREDICTED: nuclear transcription factor Y subunit A-3-like [Vitis vinifera] Length = 350 Score = 187 bits (475), Expect = 8e-45 Identities = 126/332 (37%), Positives = 160/332 (48%), Gaps = 7/332 (2%) Frame = -3 Query: 1322 RMQSFLKKESVQSSVHSSVPGVVNCSSWWASTESQVPHXXXXXXXXXXXXXSPNTYHNVK 1143 R+ + K+ QSSVHS VNC +WW S E Q+P P Y N+K Sbjct: 4 RIGNLPKRSFDQSSVHSMPHFTVNCQAWWNSNEQQLPESFSKNLSLKVESP-PQLYQNMK 62 Query: 1142 XXXXXXXXXXXXXGKS----HHEMATM-RATPDGNCNSAHSDYNKSYGTQVEGQIQT--V 984 +S H E++ + R C S+ S + +S +VEGQ Q V Sbjct: 63 QLGLQLQDQDSSSSQSTGQSHQEVSAIGRTNSQDQCISSESVHGESCEKRVEGQSQMKPV 122 Query: 983 FSPGTSNLPFLPPQLDYSQSMVHMXXXXXXXXXXXXXXAIVPQFFQMNPQFVGMAPARVP 804 F ++ F P Q+DY S+ H+ A P + PQ VG+AP RVP Sbjct: 123 FFMANPDVVFNPSQVDYGHSVTHVAYPYADPYHGGLVAAYGPHAV-IQPQLVGIAPTRVP 181 Query: 803 LPPDFGEDEPIYVNSKQYRGILRRRQSRAKLEARNKLIKDRKPYLHESRHLHALNRARGC 624 LP D ED PI+VN+KQY GILRRRQSRAK+EA+NKL+K RKPYLHESRHLHALNR RG Sbjct: 182 LPFDIAEDGPIFVNAKQYHGILRRRQSRAKMEAQNKLVKARKPYLHESRHLHALNRVRGS 241 Query: 623 GGRFLNTKLEQSKTPFTNDGENASSESSLXXXXXXXXXXXXXXXXXGNMESYITXXXXXX 444 GGRFL+TK Q +N G ++ S S G + T Sbjct: 242 GGRFLSTKKLQEPDSTSNAGCHSVSGSGHFHQKGDTTEYEVHQSDTGKFVASTTSSSDVT 301 Query: 443 XXXDKDNMHPPSNPRLSGYHPPMGTNIQDGGG 348 + D + R SG P MG +Q GGG Sbjct: 302 SVSNSDVLFRQPEHRFSGMSPHMGGAMQGGGG 333 >emb|CBI27842.3| unnamed protein product [Vitis vinifera] Length = 310 Score = 174 bits (440), Expect = 9e-41 Identities = 116/310 (37%), Positives = 147/310 (47%), Gaps = 7/310 (2%) Frame = -3 Query: 1256 VNCSSWWASTESQVPHXXXXXXXXXXXXXSPNTYHNVKXXXXXXXXXXXXXGKS----HH 1089 VNC +WW S E Q+P P Y N+K +S H Sbjct: 6 VNCQAWWNSNEQQLPESFSKNLSLKVESP-PQLYQNMKQLGLQLQDQDSSSSQSTGQSHQ 64 Query: 1088 EMATM-RATPDGNCNSAHSDYNKSYGTQVEGQIQT--VFSPGTSNLPFLPPQLDYSQSMV 918 E++ + R C S+ S + +S +VEGQ Q VF ++ F P Q+DY S+ Sbjct: 65 EVSAIGRTNSQDQCISSESVHGESCEKRVEGQSQMKPVFFMANPDVVFNPSQVDYGHSVT 124 Query: 917 HMXXXXXXXXXXXXXXAIVPQFFQMNPQFVGMAPARVPLPPDFGEDEPIYVNSKQYRGIL 738 H+ A P + PQ VG+AP RVPLP D ED PI+VN+KQY GIL Sbjct: 125 HVAYPYADPYHGGLVAAYGPHAV-IQPQLVGIAPTRVPLPFDIAEDGPIFVNAKQYHGIL 183 Query: 737 RRRQSRAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNTKLEQSKTPFTNDGEN 558 RRRQSRAK+EA+NKL+K RKPYLHESRHLHALNR RG GGRFL+TK Q +N G + Sbjct: 184 RRRQSRAKMEAQNKLVKARKPYLHESRHLHALNRVRGSGGRFLSTKKLQEPDSTSNAGCH 243 Query: 557 ASSESSLXXXXXXXXXXXXXXXXXGNMESYITXXXXXXXXXDKDNMHPPSNPRLSGYHPP 378 +S + T + D + R SG P Sbjct: 244 SSDTGKFV--------------------ASTTSSSDVTSVSNSDVLFRQPEHRFSGMSPH 283 Query: 377 MGTNIQDGGG 348 MG +Q GGG Sbjct: 284 MGGAMQGGGG 293 >ref|XP_002308270.1| predicted protein [Populus trichocarpa] gi|222854246|gb|EEE91793.1| predicted protein [Populus trichocarpa] Length = 341 Score = 161 bits (408), Expect = 5e-37 Identities = 108/262 (41%), Positives = 131/262 (50%), Gaps = 8/262 (3%) Frame = -3 Query: 1322 RMQSFLKKESVQSSVHSSVPGVVNCSSWWASTESQVPHXXXXXXXXXXXXXSPNTYHNVK 1143 R+Q+ LKK + V+C SWW S E SP YH K Sbjct: 4 RIQNLLKKNFDEPHF------TVSCPSWWNSNEQHFS-PSLSKNINFKVDSSPQPYHEAK 56 Query: 1142 XXXXXXXXXXXXXG----KSHHEMATMRAT-PDGNCNSAHSDYNKSYGTQVEGQIQTVFS 978 +SH+EM+ M T G C S+ SD +S G VEG+++ V Sbjct: 57 QLGLNLPDQESSSTLSIGQSHNEMSAMGGTNSQGQCISSESD--ESCGKGVEGKMRPVLL 114 Query: 977 PGTSNLPFLPPQLDYSQSMVHMXXXXXXXXXXXXXXAIVPQFF---QMNPQFVGMAPARV 807 T + Q D S SMV P F QM VGM RV Sbjct: 115 LSTPDGVSNHSQADCSYSMVRTPYPCADPYFGGLFNPYGPHAFIQPQMGSHMVGMTAGRV 174 Query: 806 PLPPDFGEDEPIYVNSKQYRGILRRRQSRAKLEARNKLIKDRKPYLHESRHLHALNRARG 627 PLP D +D PIYVN+KQY GILRRRQSRAKLEA+NKL+K+RKPYLHESRH+HALNR RG Sbjct: 175 PLPLDLADDGPIYVNAKQYHGILRRRQSRAKLEAQNKLVKNRKPYLHESRHIHALNRVRG 234 Query: 626 CGGRFLNTKLEQSKTPFTNDGE 561 GGRFL+TK Q P ++ G+ Sbjct: 235 SGGRFLSTKKLQRSDPTSSHGQ 256 >ref|XP_003597551.1| Nuclear transcription factor Y subunit A-3 [Medicago truncatula] gi|355486599|gb|AES67802.1| Nuclear transcription factor Y subunit A-3 [Medicago truncatula] Length = 331 Score = 156 bits (395), Expect = 2e-35 Identities = 101/248 (40%), Positives = 128/248 (51%), Gaps = 1/248 (0%) Frame = -3 Query: 1289 QSSVHSSVPGVVNCSSWWASTESQVPHXXXXXXXXXXXXXSPNTYHNVKXXXXXXXXXXX 1110 + S HS+ + C SW S+ESQV P HN K Sbjct: 7 KDSAHSTPHHIFGCPSWGTSSESQVQQTSMSKGLSFKVEALPQECHNSKALSFQFQEQDS 66 Query: 1109 XXGKSHHEMATMRATPDGNCNSAHSDYNKSYGTQVEGQIQTVFSPGTSNLPFLPPQLDYS 930 +S + + P +C+S S + ++ + G + S G+ NL PP +D+S Sbjct: 67 SSTQSTGSSQSGQI-PFQHCSSTGSTFKRTEENNM-GCLIGSSSIGSPNLTVHPPLMDHS 124 Query: 929 QSMVHMXXXXXXXXXXXXXXAIVPQFFQMNPQFVGMAPARVPLPPDFGEDEPIYVNSKQY 750 QS+ H+ A Q Q Q + A R+PLP D E EPIYVNSKQY Sbjct: 125 QSLAHVALHYADPGYNGLLSASYGQ--QYKGQLMETASVRIPLPSDMAE-EPIYVNSKQY 181 Query: 749 RGILRRRQSRAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLNT-KLEQSKTPFT 573 I+RRRQ RAKLEA NKLIKDRKPYLHESRH+HAL RARG GGRFLN KL++SK Sbjct: 182 HAIMRRRQCRAKLEAHNKLIKDRKPYLHESRHVHALKRARGAGGRFLNAKKLQESKLDSP 241 Query: 572 NDGENASS 549 N G+N S+ Sbjct: 242 NHGQNVST 249 >ref|XP_003597550.1| Nuclear transcription factor Y subunit A-3 [Medicago truncatula] gi|355486598|gb|AES67801.1| Nuclear transcription factor Y subunit A-3 [Medicago truncatula] Length = 345 Score = 152 bits (384), Expect = 3e-34 Identities = 100/260 (38%), Positives = 130/260 (50%), Gaps = 13/260 (5%) Frame = -3 Query: 1289 QSSVHSSVPGVVNCSSWWASTESQVPHXXXXXXXXXXXXXSPNTYHNVKXXXXXXXXXXX 1110 + S HS+ + C SW S+ESQV P HN K Sbjct: 7 KDSAHSTPHHIFGCPSWGTSSESQVQQTSMSKGLSFKVEALPQECHNSKALSFQFQEQDS 66 Query: 1109 XXGKSHHEMATMRATPDGNCNSAHSDYNKSYGTQVEGQIQTVFSPGTSNLPFLPPQLDYS 930 +S + + P +C+S S + ++ + G + S G+ NL PP +D+S Sbjct: 67 SSTQSTGSSQSGQI-PFQHCSSTGSTFKRTEENNM-GCLIGSSSIGSPNLTVHPPLMDHS 124 Query: 929 QSMVHMXXXXXXXXXXXXXXAIVPQFFQ------------MNPQFVGMAPARVPLPPDFG 786 QS+ H+ A Q ++ + Q + A R+PLP D Sbjct: 125 QSLAHVALHYADPGYNGLLSASYGQQYKAYSIMSSNSDQLLQGQLMETASVRIPLPSDMA 184 Query: 785 EDEPIYVNSKQYRGILRRRQSRAKLEARNKLIKDRKPYLHESRHLHALNRARGCGGRFLN 606 E EPIYVNSKQY I+RRRQ RAKLEA NKLIKDRKPYLHESRH+HAL RARG GGRFLN Sbjct: 185 E-EPIYVNSKQYHAIMRRRQCRAKLEAHNKLIKDRKPYLHESRHVHALKRARGAGGRFLN 243 Query: 605 T-KLEQSKTPFTNDGENASS 549 KL++SK N G+N S+ Sbjct: 244 AKKLQESKLDSPNHGQNVST 263