BLASTX nr result

ID: Coptis24_contig00008517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008517
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK02204.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   1e-34
tpg|DAA58880.1| TPA: hypothetical protein ZEAMMB73_327018 [Zea m...    90   1e-34
ref|XP_002458122.1| hypothetical protein SORBIDRAFT_03g027220 [S...    90   2e-34
ref|XP_003576466.1| PREDICTED: iron-sulfur cluster co-chaperone ...    91   5e-34
ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone ...    91   7e-34

>dbj|BAK02204.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 259

 Score = 92.0 bits (227), Expect(2) = 1e-34
 Identities = 40/54 (74%), Positives = 48/54 (88%)
 Frame = +1

Query: 55  SCRSIQPVDPFVDYFQIFHLEKIYGIDDSHLESKYKNWQKKLHPDLVHTKSEKE 216
           SCRS+QPVDP VDYFQIF L++ Y + D++LE KYK+WQKKLHPDLVH+KSEKE
Sbjct: 88  SCRSVQPVDPAVDYFQIFGLDRGYDVKDTNLEGKYKDWQKKLHPDLVHSKSEKE 141



 Score = 79.7 bits (195), Expect(2) = 1e-34
 Identities = 37/51 (72%), Positives = 47/51 (92%)
 Frame = +3

Query: 210 EREYAAKQSSLVIDAYQTLRKPLLRAIYLLQLEGVHVDEEKTVSEPELLAE 362
           ER++AA QS+LVI+AY+TL KPL RA+YLLQLEG+HVDEEKT+++PELL E
Sbjct: 141 ERDFAAGQSALVIEAYRTLSKPLPRALYLLQLEGIHVDEEKTINDPELLME 191


>tpg|DAA58880.1| TPA: hypothetical protein ZEAMMB73_327018 [Zea mays]
          Length = 259

 Score = 90.1 bits (222), Expect(2) = 1e-34
 Identities = 40/54 (74%), Positives = 47/54 (87%)
 Frame = +1

Query: 55  SCRSIQPVDPFVDYFQIFHLEKIYGIDDSHLESKYKNWQKKLHPDLVHTKSEKE 216
           SC S+QPVDP VDYFQIF L++ Y I D++LE KYK+WQKKLHPDLVH+KSEKE
Sbjct: 88  SCGSVQPVDPAVDYFQIFGLKREYNITDNNLEGKYKDWQKKLHPDLVHSKSEKE 141



 Score = 81.3 bits (199), Expect(2) = 1e-34
 Identities = 38/51 (74%), Positives = 47/51 (92%)
 Frame = +3

Query: 210 EREYAAKQSSLVIDAYQTLRKPLLRAIYLLQLEGVHVDEEKTVSEPELLAE 362
           ER YAA+QS+LVIDAY+TL KPL RA+YLL+LEG+HVDEEKT+++PELL E
Sbjct: 141 ERGYAAEQSALVIDAYRTLSKPLSRALYLLKLEGIHVDEEKTINDPELLME 191


>ref|XP_002458122.1| hypothetical protein SORBIDRAFT_03g027220 [Sorghum bicolor]
           gi|241930097|gb|EES03242.1| hypothetical protein
           SORBIDRAFT_03g027220 [Sorghum bicolor]
          Length = 264

 Score = 90.1 bits (222), Expect(2) = 2e-34
 Identities = 40/54 (74%), Positives = 47/54 (87%)
 Frame = +1

Query: 55  SCRSIQPVDPFVDYFQIFHLEKIYGIDDSHLESKYKNWQKKLHPDLVHTKSEKE 216
           SC S+QPVDP VDYFQIF L++ Y I D++LE KYK+WQKKLHPDLVH+KSEKE
Sbjct: 93  SCGSVQPVDPAVDYFQIFGLKREYNIKDNNLEGKYKDWQKKLHPDLVHSKSEKE 146



 Score = 80.9 bits (198), Expect(2) = 2e-34
 Identities = 38/51 (74%), Positives = 47/51 (92%)
 Frame = +3

Query: 210 EREYAAKQSSLVIDAYQTLRKPLLRAIYLLQLEGVHVDEEKTVSEPELLAE 362
           ER YAA+QS+LVIDAY+TL KPL RA+YLL+LEG+HVDEEKT+++PELL E
Sbjct: 146 ERGYAAEQSALVIDAYRTLSKPLPRALYLLKLEGIHVDEEKTINDPELLME 196


>ref|XP_003576466.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Brachypodium distachyon]
          Length = 258

 Score = 91.3 bits (225), Expect(2) = 5e-34
 Identities = 40/54 (74%), Positives = 48/54 (88%)
 Frame = +1

Query: 55  SCRSIQPVDPFVDYFQIFHLEKIYGIDDSHLESKYKNWQKKLHPDLVHTKSEKE 216
           SCRS+QPVDP VDYF+IF L++ Y I D++LE KYK+WQKKLHPDLVH+KSEKE
Sbjct: 87  SCRSVQPVDPAVDYFRIFGLDRGYNIKDNNLEGKYKDWQKKLHPDLVHSKSEKE 140



 Score = 78.2 bits (191), Expect(2) = 5e-34
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = +3

Query: 210 EREYAAKQSSLVIDAYQTLRKPLLRAIYLLQLEGVHVDEEKTVSEPELLAE 362
           ER +AA+QS+LVIDAY+TL KPL RA+YLLQLEG+HVDEEKT+++ ELL E
Sbjct: 140 ERAFAAEQSALVIDAYRTLSKPLPRALYLLQLEGIHVDEEKTINDQELLME 190


>ref|XP_004136528.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Cucumis sativus]
           gi|449501132|ref|XP_004161286.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial-like
           [Cucumis sativus]
          Length = 275

 Score = 90.9 bits (224), Expect(2) = 7e-34
 Identities = 42/54 (77%), Positives = 47/54 (87%)
 Frame = +1

Query: 55  SCRSIQPVDPFVDYFQIFHLEKIYGIDDSHLESKYKNWQKKLHPDLVHTKSEKE 216
           SCRSIQPVD  VDYFQIF LEK Y I D +LESKYK+WQKKLHPDLVH+KS++E
Sbjct: 104 SCRSIQPVDQLVDYFQIFGLEKEYEIGDVNLESKYKDWQKKLHPDLVHSKSDRE 157



 Score = 78.2 bits (191), Expect(2) = 7e-34
 Identities = 39/51 (76%), Positives = 45/51 (88%)
 Frame = +3

Query: 210 EREYAAKQSSLVIDAYQTLRKPLLRAIYLLQLEGVHVDEEKTVSEPELLAE 362
           EREYAA+QS+ VIDAY+TL KPL RAIY+L+LEGV VDEE T+SEPELL E
Sbjct: 157 EREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGVDVDEEDTISEPELLNE 207


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