BLASTX nr result

ID: Coptis24_contig00008516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008516
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312673.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-30
ref|XP_002271639.2| PREDICTED: uncharacterized protein LOC100242...    89   8e-29
emb|CBI18643.3| unnamed protein product [Vitis vinifera]               89   1e-28
emb|CAN80873.1| hypothetical protein VITISV_004539 [Vitis vinifera]    89   1e-28
ref|XP_002315668.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-28

>ref|XP_002312673.1| predicted protein [Populus trichocarpa] gi|222852493|gb|EEE90040.1|
           predicted protein [Populus trichocarpa]
          Length = 191

 Score = 87.0 bits (214), Expect(2) = 2e-30
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +2

Query: 32  SPKNPGNTIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205
           +P +   TIKFL SYGGKI+PRF DGKLRY GGETRV+ +DRSI+F ELL+KLGEL G
Sbjct: 15  APSSAPATIKFLCSYGGKIIPRFPDGKLRYQGGETRVIGVDRSISFAELLLKLGELCG 72



 Score = 70.9 bits (172), Expect(2) = 2e-30
 Identities = 34/51 (66%), Positives = 41/51 (80%)
 Frame = +3

Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYDIASQAINGSPLKIRGF 434
           G+SVSLRCQLP EDLDAL+S+ +DEDL+N+IEEYD A  A   + LKIR F
Sbjct: 72  GTSVSLRCQLPKEDLDALVSITSDEDLANLIEEYDRAGAATPTASLKIRAF 122


>ref|XP_002271639.2| PREDICTED: uncharacterized protein LOC100242640 isoform 2 [Vitis
           vinifera]
          Length = 188

 Score = 89.4 bits (220), Expect(2) = 8e-29
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = +2

Query: 26  SSSPKNPGNTIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205
           S S      TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G
Sbjct: 8   SRSMVTSNQTIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCG 67



 Score = 62.8 bits (151), Expect(2) = 8e-29
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434
           G SV LRCQLP EDLDAL+SV +DEDL+N+IEEYD +AS     + LKIR F
Sbjct: 67  GKSVCLRCQLPTEDLDALVSVTSDEDLANLIEEYDRVASPP---ASLKIRAF 115


>emb|CBI18643.3| unnamed protein product [Vitis vinifera]
          Length = 185

 Score = 88.6 bits (218), Expect(2) = 1e-28
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +2

Query: 53  TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205
           TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G
Sbjct: 7   TIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCG 57



 Score = 62.8 bits (151), Expect(2) = 1e-28
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434
           G SV LRCQLP EDLDAL+SV +DEDL+N+IEEYD +AS     + LKIR F
Sbjct: 57  GKSVCLRCQLPTEDLDALVSVTSDEDLANLIEEYDRVASPP---ASLKIRAF 105


>emb|CAN80873.1| hypothetical protein VITISV_004539 [Vitis vinifera]
          Length = 185

 Score = 88.6 bits (218), Expect(2) = 1e-28
 Identities = 41/51 (80%), Positives = 46/51 (90%)
 Frame = +2

Query: 53  TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205
           TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G
Sbjct: 7   TIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCG 57



 Score = 62.8 bits (151), Expect(2) = 1e-28
 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434
           G SV LRCQLP EDLDAL+SV +DEDL+N+IEEYD +AS     + LKIR F
Sbjct: 57  GKSVCLRCQLPTEDLDALVSVTSDEDLANLIEEYDRVASPP---ASLKIRAF 105


>ref|XP_002315668.1| predicted protein [Populus trichocarpa] gi|222864708|gb|EEF01839.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score = 87.4 bits (215), Expect(2) = 2e-28
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = +2

Query: 53  TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205
           TIKFL SYGGKI+PRF DGKLRYHGGETRV+ ++RSI+F ELL+KLGEL G
Sbjct: 1   TIKFLCSYGGKIIPRFPDGKLRYHGGETRVLGVERSISFAELLLKLGELRG 51



 Score = 63.2 bits (152), Expect(2) = 2e-28
 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
 Frame = +3

Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434
           G+SV+LRCQLP EDLDAL+S+ + EDL+N+IEEYD  A  A   + LKIR F
Sbjct: 51  GTSVNLRCQLPKEDLDALVSITSGEDLANLIEEYDRAAGAATPTASLKIRAF 102


Top