BLASTX nr result
ID: Coptis24_contig00008516
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008516 (434 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312673.1| predicted protein [Populus trichocarpa] gi|2... 87 2e-30 ref|XP_002271639.2| PREDICTED: uncharacterized protein LOC100242... 89 8e-29 emb|CBI18643.3| unnamed protein product [Vitis vinifera] 89 1e-28 emb|CAN80873.1| hypothetical protein VITISV_004539 [Vitis vinifera] 89 1e-28 ref|XP_002315668.1| predicted protein [Populus trichocarpa] gi|2... 87 2e-28 >ref|XP_002312673.1| predicted protein [Populus trichocarpa] gi|222852493|gb|EEE90040.1| predicted protein [Populus trichocarpa] Length = 191 Score = 87.0 bits (214), Expect(2) = 2e-30 Identities = 41/58 (70%), Positives = 48/58 (82%) Frame = +2 Query: 32 SPKNPGNTIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205 +P + TIKFL SYGGKI+PRF DGKLRY GGETRV+ +DRSI+F ELL+KLGEL G Sbjct: 15 APSSAPATIKFLCSYGGKIIPRFPDGKLRYQGGETRVIGVDRSISFAELLLKLGELCG 72 Score = 70.9 bits (172), Expect(2) = 2e-30 Identities = 34/51 (66%), Positives = 41/51 (80%) Frame = +3 Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYDIASQAINGSPLKIRGF 434 G+SVSLRCQLP EDLDAL+S+ +DEDL+N+IEEYD A A + LKIR F Sbjct: 72 GTSVSLRCQLPKEDLDALVSITSDEDLANLIEEYDRAGAATPTASLKIRAF 122 >ref|XP_002271639.2| PREDICTED: uncharacterized protein LOC100242640 isoform 2 [Vitis vinifera] Length = 188 Score = 89.4 bits (220), Expect(2) = 8e-29 Identities = 43/60 (71%), Positives = 48/60 (80%) Frame = +2 Query: 26 SSSPKNPGNTIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205 S S TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G Sbjct: 8 SRSMVTSNQTIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCG 67 Score = 62.8 bits (151), Expect(2) = 8e-29 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = +3 Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434 G SV LRCQLP EDLDAL+SV +DEDL+N+IEEYD +AS + LKIR F Sbjct: 67 GKSVCLRCQLPTEDLDALVSVTSDEDLANLIEEYDRVASPP---ASLKIRAF 115 >emb|CBI18643.3| unnamed protein product [Vitis vinifera] Length = 185 Score = 88.6 bits (218), Expect(2) = 1e-28 Identities = 41/51 (80%), Positives = 46/51 (90%) Frame = +2 Query: 53 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205 TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G Sbjct: 7 TIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCG 57 Score = 62.8 bits (151), Expect(2) = 1e-28 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = +3 Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434 G SV LRCQLP EDLDAL+SV +DEDL+N+IEEYD +AS + LKIR F Sbjct: 57 GKSVCLRCQLPTEDLDALVSVTSDEDLANLIEEYDRVASPP---ASLKIRAF 105 >emb|CAN80873.1| hypothetical protein VITISV_004539 [Vitis vinifera] Length = 185 Score = 88.6 bits (218), Expect(2) = 1e-28 Identities = 41/51 (80%), Positives = 46/51 (90%) Frame = +2 Query: 53 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205 TIKFL SYGGKILPR+ DGKLRYHGGETRV+ +DRSI+F ELL+KLGEL G Sbjct: 7 TIKFLCSYGGKILPRYPDGKLRYHGGETRVLAVDRSISFAELLVKLGELCG 57 Score = 62.8 bits (151), Expect(2) = 1e-28 Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = +3 Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434 G SV LRCQLP EDLDAL+SV +DEDL+N+IEEYD +AS + LKIR F Sbjct: 57 GKSVCLRCQLPTEDLDALVSVTSDEDLANLIEEYDRVASPP---ASLKIRAF 105 >ref|XP_002315668.1| predicted protein [Populus trichocarpa] gi|222864708|gb|EEF01839.1| predicted protein [Populus trichocarpa] Length = 188 Score = 87.4 bits (215), Expect(2) = 2e-28 Identities = 40/51 (78%), Positives = 46/51 (90%) Frame = +2 Query: 53 TIKFLISYGGKILPRFTDGKLRYHGGETRVVTIDRSITFTELLIKLGELNG 205 TIKFL SYGGKI+PRF DGKLRYHGGETRV+ ++RSI+F ELL+KLGEL G Sbjct: 1 TIKFLCSYGGKIIPRFPDGKLRYHGGETRVLGVERSISFAELLLKLGELRG 51 Score = 63.2 bits (152), Expect(2) = 2e-28 Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%) Frame = +3 Query: 282 GSSVSLRCQLPDEDLDALISVVTDEDLSNIIEEYD-IASQAINGSPLKIRGF 434 G+SV+LRCQLP EDLDAL+S+ + EDL+N+IEEYD A A + LKIR F Sbjct: 51 GTSVNLRCQLPKEDLDALVSITSGEDLANLIEEYDRAAGAATPTASLKIRAF 102