BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008508
         (2072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   733   0.0  
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              730   0.0  
ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|2...   694   0.0  
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun...   673   0.0  
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   665   0.0  

>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
            vinifera]
          Length = 564

 Score =  733 bits (1892), Expect = 0.0
 Identities = 370/556 (66%), Positives = 452/556 (81%), Gaps = 4/556 (0%)
 Frame = -3

Query: 2016 LAPFKLPNFHLNSKLGF--YKSYNCRAVQTMSISLTEGQQEVKVKEKIQLNEKEKQIFDR 1843
            L PF LP    ++  GF      +CRA+ +   S       V+V++ I L  KE QIF +
Sbjct: 22   LQPFLLP---CSTAFGFPTLSPLHCRAMASSPPS-------VQVRDSIDLTPKETQIFQK 71

Query: 1842 LLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDK 1663
            LLQVV HF+L+TQLRVAGGWVRDKLLGKECYDIDIALD+MLG+EFCEK+N++L  +GE+K
Sbjct: 72   LLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDMLGREFCEKINDYLSCTGEEK 131

Query: 1662 CGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRD 1483
             GIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSENSRIPTM FGTAK+DAYRRD
Sbjct: 132  QGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSENSRIPTMRFGTAKEDAYRRD 191

Query: 1482 LTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGF 1303
            LTINSLFYNINT++VEDFT RGI+DLKSGKIVTPLPPK+TFLDDPLRVLRAIRFGARFGF
Sbjct: 192  LTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTFLDDPLRVLRAIRFGARFGF 251

Query: 1302 VLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSL 1123
            +LD+ELK AA  D+V+AAIADKISRERIGHEIDLMISGNEPVKAM YIC+L LF VVFSL
Sbjct: 252  ILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEPVKAMTYICDLLLFSVVFSL 311

Query: 1122 PCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGYSTFNDDQRRLYLYGVLFLPLRKSMYSD 943
            P +   + S    DRLC+ Y+DA W+L+Q++G STFND+QRRLYLY  LFLP RK++Y  
Sbjct: 312  PPIVKPAISEEC-DRLCIGYIDAGWNLIQLIGSSTFNDEQRRLYLYAALFLPFRKTLY-- 368

Query: 942  NKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASERFVSLVPFL--TSKVMNVEEDS 769
             +G KA K+PVVNHI RNSLKL+ASDA+TV+++H A E+F+SL+PF+  T  +   E + 
Sbjct: 369  -EGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFISLIPFIESTESIQISEAEW 427

Query: 768  EIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSS 589
             IE  ++P TSK RI+ G LLREIKGFWRV+L++STL++P+D +     S+   +LDK  
Sbjct: 428  GIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPNDINHTRDISKNNFQLDKRR 487

Query: 588  QMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSG 409
            +++  VEN I+ LGL+ VWE+KPLVNGK+IM++LQLK+GGP V++WQ +L++WQLA+PSG
Sbjct: 488  KVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPLVRDWQQKLIQWQLAHPSG 547

Query: 408  TAEECLDWMRQTHSKR 361
            TAEECLDWMRQ   KR
Sbjct: 548  TAEECLDWMRQKRPKR 563


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  730 bits (1884), Expect = 0.0
 Identities = 359/515 (69%), Positives = 436/515 (84%), Gaps = 2/515 (0%)
 Frame = -3

Query: 1899 VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNML 1720
            V+V++ I L  KE QIF +LLQVV HF+L+TQLRVAGGWVRDKLLGKECYDIDIALD+ML
Sbjct: 8    VQVRDSIDLTPKETQIFQKLLQVVRHFSLRTQLRVAGGWVRDKLLGKECYDIDIALDDML 67

Query: 1719 GKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 1540
            G+EFCEK+N++L  +GE+K GIGVIQCNPDQSKHLETARMRL+D WIDFVNLRSE+YSEN
Sbjct: 68   GREFCEKINDYLSCTGEEKQGIGVIQCNPDQSKHLETARMRLFDEWIDFVNLRSEDYSEN 127

Query: 1539 SRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETF 1360
            SRIPTM FGTAK+DAYRRDLTINSLFYNINT++VEDFT RGI+DLKSGKIVTPLPPK+TF
Sbjct: 128  SRIPTMRFGTAKEDAYRRDLTINSLFYNINTSSVEDFTGRGIEDLKSGKIVTPLPPKDTF 187

Query: 1359 LDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEP 1180
            LDDPLRVLRAIRFGARFGF+LD+ELK AA  D+V+AAIADKISRERIGHEIDLMISGNEP
Sbjct: 188  LDDPLRVLRAIRFGARFGFILDEELKLAAGCDDVRAAIADKISRERIGHEIDLMISGNEP 247

Query: 1179 VKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGYSTFNDDQR 1000
            VKAM YIC+L LF VVFSLP +   + S    DRLC+ Y+DA W+L+Q++G STFND+QR
Sbjct: 248  VKAMTYICDLLLFSVVFSLPPIVKPAISEEC-DRLCIGYIDAGWNLIQLIGSSTFNDEQR 306

Query: 999  RLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASERFV 820
            RLYLY  LFLP RK++Y   +G KA K+PVVNHI RNSLKL+ASDA+TV+++H A E+F+
Sbjct: 307  RLYLYAALFLPFRKTLY---EGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFI 363

Query: 819  SLVPFL--TSKVMNVEEDSEIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLIFPS 646
            SL+PF+  T  +   E +  IE  ++P TSK RI+ G LLREIKGFWRV+L++STL++P+
Sbjct: 364  SLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPN 423

Query: 645  DSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKTGGP 466
            D +     S+   +LDK  +++  VEN I+ LGL+ VWE+KPLVNGK+IM++LQLK+GGP
Sbjct: 424  DINHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGP 483

Query: 465  QVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKR 361
             V++WQ +L++WQLA+PSGTAEECLDWMRQ   KR
Sbjct: 484  LVRDWQQKLIQWQLAHPSGTAEECLDWMRQKRPKR 518


>ref|XP_002327340.1| predicted protein [Populus trichocarpa] gi|222835710|gb|EEE74145.1|
            predicted protein [Populus trichocarpa]
          Length = 528

 Score =  694 bits (1792), Expect = 0.0
 Identities = 345/522 (66%), Positives = 422/522 (80%), Gaps = 5/522 (0%)
 Frame = -3

Query: 1899 VKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNML 1720
            ++VK+KI+LNE EKQIFDRL+  + HFNL T+LRVAGGWVRDKLLGKEC DIDIA+DNML
Sbjct: 14   IEVKDKIELNEVEKQIFDRLVNTLRHFNLNTELRVAGGWVRDKLLGKECCDIDIAIDNML 73

Query: 1719 GKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSEN 1540
            G EF +KV E+LL +GE+  G+GVI  NPDQSKHLETARMRL D+WIDFVNLRSE+YSEN
Sbjct: 74   GSEFVDKVREYLLSTGEEAHGVGVIPRNPDQSKHLETARMRLLDLWIDFVNLRSEDYSEN 133

Query: 1539 SRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKETF 1360
            SRIPTMTFGTAK+DAYRRDLTINSLFYNINT++VED T RGI+DLKSGKIVTPLPPK+TF
Sbjct: 134  SRIPTMTFGTAKEDAYRRDLTINSLFYNINTSSVEDLTGRGIEDLKSGKIVTPLPPKDTF 193

Query: 1359 LDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGNEP 1180
            LDDPLRVLRAIRFGARFGFVL++ELKEAA+ D+VK A+  KIS+ERIG EIDLMISGN+P
Sbjct: 194  LDDPLRVLRAIRFGARFGFVLEEELKEAAACDDVKNALKAKISKERIGTEIDLMISGNQP 253

Query: 1179 VKAMAYICELQLFWVVFSLPCLPHESGSPNFEDR---LCVAYVDAAWSLLQVVGYSTFND 1009
            VKAM YI +L LFWVVF+L    H    P   +    LCVAY+DAAW+L+ ++G S+F  
Sbjct: 254  VKAMTYIADLTLFWVVFNL----HPKVEPTVSEECQGLCVAYLDAAWNLIHLIGGSSFTG 309

Query: 1008 DQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASE 829
            +QRRL LY  LFLPLR ++Y D KGK   KVPVVN+IFR+SLK KASD ETVI +H + E
Sbjct: 310  EQRRLCLYAALFLPLRNTIYKDEKGK---KVPVVNYIFRDSLKQKASDPETVIKIHRSLE 366

Query: 828  RFVSLVPFLTSK--VMNVEEDSEIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLI 655
            +F++L+P LTS       E D  +E F+VP TSK R+  G LLRE+K FWRV LLIST++
Sbjct: 367  KFLTLIPLLTSNDDTQPAEVDMGMELFDVPITSKLRVATGFLLREVKEFWRVGLLISTML 426

Query: 654  FPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKT 475
            +PSD+   +   E   ELD+   +++  E+ I+ LGL+ VW++KPLVNGK+IM++LQLK+
Sbjct: 427  YPSDTDSTQDFLEKKFELDRRKDLFKAAEDAIVNLGLERVWDLKPLVNGKDIMTVLQLKS 486

Query: 474  GGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKLK 349
            GGP VKEWQ +L+ WQ A+P+GT EECLDWM++TH KRAK++
Sbjct: 487  GGPVVKEWQQKLLAWQFAHPAGTVEECLDWMKETHLKRAKME 528


>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
            gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
            [Ricinus communis]
          Length = 577

 Score =  673 bits (1737), Expect = 0.0
 Identities = 334/540 (61%), Positives = 431/540 (79%), Gaps = 2/540 (0%)
 Frame = -3

Query: 1962 KSYNCRAVQTMSISLTEGQQEVKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGW 1783
            + ++CRA+ T +      Q  ++VK+KI+L E EK+IFDRLL  + HFNLQTQLRVAGGW
Sbjct: 48   RRFSCRAMGTST-----PQAVIQVKDKIELTEIEKKIFDRLLNTLRHFNLQTQLRVAGGW 102

Query: 1782 VRDKLLGKECYDIDIALDNMLGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETAR 1603
            VRDKLLGK+CYDIDIA+DNMLG EF +KV E+LL +GE+  G+G+I  NPDQSKHLETAR
Sbjct: 103  VRDKLLGKDCYDIDIAIDNMLGSEFVDKVREYLLSTGEEVGGLGIIPRNPDQSKHLETAR 162

Query: 1602 MRLYDIWIDFVNLRSENYSENSRIPTMTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTE 1423
            MRL+D+WIDFVNLR E+Y+E+SRIPTM FGTA++DA+RRDLTINSLFYNINT++VED TE
Sbjct: 163  MRLFDLWIDFVNLRCEDYTEDSRIPTMKFGTAEEDAFRRDLTINSLFYNINTSSVEDLTE 222

Query: 1422 RGIKDLKSGKIVTPLPPKETFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIA 1243
            RGI+DLK GKIVTPLPPK TFLDDPLRVLRAIRFGARFGF+LD+ELKEAA+ D+VK A+A
Sbjct: 223  RGIEDLKFGKIVTPLPPKATFLDDPLRVLRAIRFGARFGFILDEELKEAAACDDVKNALA 282

Query: 1242 DKISRERIGHEIDLMISGNEPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAY 1063
             KIS+ERIG+EIDLM+SGN+PVKAM YI +L LFW++F LP     + S     +LC+AY
Sbjct: 283  AKISKERIGNEIDLMLSGNQPVKAMTYIGDLTLFWIIFGLPPKVEPAVSEGCH-KLCIAY 341

Query: 1062 VDAAWSLLQVVGYSTFNDDQRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSL 883
            +DA W+L+Q +  S F D+QRRL LY  LFLP R  +Y + KGK    VPVVN IF++SL
Sbjct: 342  LDATWNLIQSIRSSFFTDEQRRLSLYAALFLPFRNIIYIE-KGK---NVPVVNFIFKDSL 397

Query: 882  KLKASDAETVINLHVASERFVSLVPFLTS--KVMNVEEDSEIENFNVPDTSKQRIVAGKL 709
            K KASD+ETV+ +H + E+F++++P LTS       E D  +E  +VP ++K R++ G L
Sbjct: 398  KQKASDSETVMKIHKSLEKFLNIIPLLTSDDDTQPAEVDWALELIDVPFSAKLRVLTGFL 457

Query: 708  LREIKGFWRVSLLISTLIFPSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWE 529
            LREIK FWRV+LLIST+I+P+D    +   +   ELDK  ++++ VE+ I + GL+ +W+
Sbjct: 458  LREIKDFWRVALLISTMIYPADIDSTQSFLDKQFELDKRKELFKTVEDAITKQGLEKIWD 517

Query: 528  MKPLVNGKEIMSILQLKTGGPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKLK 349
            +KPLVNGKEIMS+LQLK+GGP V+EWQ +L+ WQLA+P+GTAEECLDWM++TH KRA+++
Sbjct: 518  VKPLVNGKEIMSVLQLKSGGPLVREWQQKLLAWQLAHPTGTAEECLDWMKETHLKRARIE 577


>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
            [Cucumis sativus]
          Length = 577

 Score =  665 bits (1716), Expect = 0.0
 Identities = 349/580 (60%), Positives = 435/580 (75%), Gaps = 9/580 (1%)
 Frame = -3

Query: 2064 KAHRLL---LTYPQRHLTFL---APFKLPNFHLNSKLGFYKSYNCRAVQTMSISLTEGQQ 1903
            K H L+   L++P   L F    +PFK P     S             ++M+ +++  + 
Sbjct: 12   KLHSLIIPSLSFPTSFLKFPPPHSPFKFPTTRFPSP------------KSMTTAISSPKP 59

Query: 1902 EVKVKEKIQLNEKEKQIFDRLLQVVTHFNLQTQLRVAGGWVRDKLLGKECYDIDIALDNM 1723
             V+VK+ I+L E E++IF RLL  + HFNLQTQLRVAGGWVRDKLLGK+CYDIDIALDNM
Sbjct: 60   LVQVKDNIELTETEEKIFHRLLGTLRHFNLQTQLRVAGGWVRDKLLGKDCYDIDIALDNM 119

Query: 1722 LGKEFCEKVNEFLLHSGEDKCGIGVIQCNPDQSKHLETARMRLYDIWIDFVNLRSENYSE 1543
            LG EF +KV E+LL  GE+  G+ VI CNPDQSKHLETARMR++D+WIDFVNLR E YSE
Sbjct: 120  LGSEFVDKVREYLLTVGEEAQGVAVIPCNPDQSKHLETARMRIFDMWIDFVNLRCEEYSE 179

Query: 1542 NSRIPT-MTFGTAKDDAYRRDLTINSLFYNINTNAVEDFTERGIKDLKSGKIVTPLPPKE 1366
            NSRIPT   FGTA++DAYRRDLTINSLFYNIN + VEDFT+RGI DLK GKIVTPLP K 
Sbjct: 180  NSRIPTKQKFGTAEEDAYRRDLTINSLFYNINLSIVEDFTKRGISDLKFGKIVTPLPAKA 239

Query: 1365 TFLDDPLRVLRAIRFGARFGFVLDKELKEAASSDEVKAAIADKISRERIGHEIDLMISGN 1186
            TF+DDPLRVLRAIRF ARF F LD+ELKEAA+ +EVKAA+A KISRERIG EIDLMI+GN
Sbjct: 240  TFMDDPLRVLRAIRFCARFEFTLDEELKEAAACEEVKAALAAKISRERIGVEIDLMIAGN 299

Query: 1185 EPVKAMAYICELQLFWVVFSLPCLPHESGSPNFEDRLCVAYVDAAWSLLQVVGYSTFNDD 1006
            +PVKAM+YI +L LFW VF+LP    E       +RLCVA +DA W+L+Q +   TF+D+
Sbjct: 300  QPVKAMSYISDLTLFWTVFTLPS-NIEPEISEVCNRLCVACLDATWNLIQHINCFTFSDE 358

Query: 1005 QRRLYLYGVLFLPLRKSMYSDNKGKKAIKVPVVNHIFRNSLKLKASDAETVINLHVASER 826
            Q+RL LY  LFLP RK  + D K K   K+P+VN+IFR+SLK KASDAETV+N+H A E+
Sbjct: 359  QKRLSLYASLFLPFRKFTFKDKKSK---KIPIVNYIFRDSLKRKASDAETVVNVHQALEK 415

Query: 825  FVSLVPFLTSK--VMNVEEDSEIENFNVPDTSKQRIVAGKLLREIKGFWRVSLLISTLIF 652
            F+SL+P L SK  +     D  +E  +VP TS+ R++ G LLREIK FW V+LL++TL++
Sbjct: 416  FLSLIPLLVSKEEIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLY 475

Query: 651  PSDSSLAEGSSEMCAELDKSSQMYRRVENIILELGLDNVWEMKPLVNGKEIMSILQLKTG 472
            P+D   A+       EL+K  +++  V N I++LGL+NVWEMKPLVNGKEIM+ILQLK G
Sbjct: 476  PADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAG 535

Query: 471  GPQVKEWQNRLVEWQLAYPSGTAEECLDWMRQTHSKRAKL 352
            GP V+EWQ +++ WQLA+PSGT+EECLDW+R+THSKR KL
Sbjct: 536  GPLVREWQQKILAWQLAHPSGTSEECLDWIRETHSKRVKL 575