BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008504
         (1952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   640   0.0  
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              639   e-180
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   624   e-176
ref|XP_002332503.1| predicted protein [Populus trichocarpa] gi|2...   623   e-176
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   610   e-172

>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  640 bits (1652), Expect = 0.0
 Identities = 341/624 (54%), Positives = 419/624 (67%), Gaps = 13/624 (2%)
 Frame = +3

Query: 120  ELRFSRWNNANAEKFTQKQRAQQQIEDDIRHTRRFTSATQITQNYNPAPPHPITVNENFK 299
            E+RFSRWNNANAE+FT ++RAQ++IED+IR  RRF SAT+I    +            FK
Sbjct: 24   EVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAAAAGTFK 83

Query: 300  SIGTPSSPSRPSIPGKKSKYSK-PPTDHPAF---SKPSKVSISRVPQDTPRGVQVSEDGV 467
            S GTPSSPS+PSIPGK SKYSK   T HPAF   S+ +K+    +  +  RG+ + EDGV
Sbjct: 84   STGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGISIGEDGV 143

Query: 468  SYRVPNAPFEFQYSYTETPKVKPLALREPPFVPFGPTTMPRPWTGRAPLSPSKKKLPEFD 647
            SY VP  PFE +YSYTETPKVKP+ALREPPF+PFGP TMPRPWTGRAPL PSKKKL EFD
Sbjct: 144  SYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFD 203

Query: 648  SFKLPPPHKKGVKPVQSPGPFLAGMGPKYVQSREEILGDPLMEDEIKELVHGCLKTKRQL 827
            SF+LPPP KK VKPVQ+PGPFL G GP+YV+SREEILG+PL E+EIKELV GC+K+KRQL
Sbjct: 204  SFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQL 263

Query: 828  NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKIIYSRGGAL 1007
            NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGK+IY +GG L
Sbjct: 264  NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVL 323

Query: 1008 XXXXXXXXXXXXXXXXXXMLWKPVTPVYPLLIQQVPEGLTLEEAREMRKRGRELQAICKL 1187
                              MLWKPVTPVYP L+Q+ PEGLTLEEA  MRK+GR+L  ICKL
Sbjct: 324  FLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKL 383

Query: 1188 GKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDLVPCVLVSFEFEHILM 1367
             KNGVY+ LV +V+EAFEECELVR++CQG+N SDY+KIGAKLKDLVPCVL+SFE EHILM
Sbjct: 384  AKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILM 443

Query: 1368 WRGWDWKSSFLKSKDDCMEDRESATDGAIVNHTVADASIVANEETTELIAQDS---LTDD 1538
            WRG DWK    K +D C E +ES  +        ++ASI    E  EL A  S      D
Sbjct: 444  WRGSDWKFLHPKPEDGCKEAKESDNN--------SEASIPPPFEGQELSASCSSKISVKD 495

Query: 1539 ATLETRNASSSSLYSEGV-INRNLGLSSSESEVQYFSATSKDSFVKDACESFTMPNSIRS 1715
             +L+  +  +S + +E V +++   LSS  +++  F    K        ++    +++  
Sbjct: 496  TSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSD 555

Query: 1716 YDALVPTVDKRATKNDSVHSSDYESE--PTTSSAPKHSAGLA-PASDGIAH--DDLVTSS 1880
                    +   TK D+ H +D ES   P        +  +     D + H  D L    
Sbjct: 556  DTGGTNESEIILTKLDNAHHADDESAAMPVELDTMLENGSIKNELMDAVTHDMDKLQDIP 615

Query: 1881 EGSESLTKIARLCSTCTDEVVVLM 1952
            + S+   K+    + CT  +++L+
Sbjct: 616  KASQDCGKMTGSSAPCTGGLLLLL 639


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  639 bits (1647), Expect = e-180
 Identities = 331/565 (58%), Positives = 398/565 (70%), Gaps = 8/565 (1%)
 Frame = +3

Query: 120  ELRFSRWNNANAEKFTQKQRAQQQIEDDIRHTRRFTSATQITQNYNPAPPHPITVNENFK 299
            E+RFSRWNNANAE+FT ++RAQ++IED+IR  RRF SAT+I    +            FK
Sbjct: 24   EVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFDSATRIADIDDAGTSKEAAAAGTFK 83

Query: 300  SIGTPSSPSRPSIPGKKSKYSK-PPTDHPAF---SKPSKVSISRVPQDTPRGVQVSEDGV 467
            S GTPSSPS+PSIPGK SKYSK   T HPAF   S+ +K+    +  +  RG+ + EDGV
Sbjct: 84   STGTPSSPSKPSIPGKSSKYSKNSKTSHPAFRQISRRTKLPGPNISPEAKRGISIGEDGV 143

Query: 468  SYRVPNAPFEFQYSYTETPKVKPLALREPPFVPFGPTTMPRPWTGRAPLSPSKKKLPEFD 647
            SY VP  PFE +YSYTETPKVKP+ALREPPF+PFGP TMPRPWTGRAPL PSKKKL EFD
Sbjct: 144  SYMVPGVPFELRYSYTETPKVKPIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFD 203

Query: 648  SFKLPPPHKKGVKPVQSPGPFLAGMGPKYVQSREEILGDPLMEDEIKELVHGCLKTKRQL 827
            SF+LPPP KK VKPVQ+PGPFL G GP+YV+SREEILG+PL E+EIKELV GC+K+KRQL
Sbjct: 204  SFQLPPPGKKRVKPVQAPGPFLPGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQL 263

Query: 828  NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKIIYSRGGAL 1007
            NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGK+IY +GG L
Sbjct: 264  NMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVL 323

Query: 1008 XXXXXXXXXXXXXXXXXXMLWKPVTPVYPLLIQQVPEGLTLEEAREMRKRGRELQAICKL 1187
                              MLWKPVTPVYP L+Q+ PEGLTLEEA  MRK+GR+L  ICKL
Sbjct: 324  FLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKL 383

Query: 1188 GKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDLVPCVLVSFEFEHILM 1367
             KNGVY+ LV +V+EAFEECELVR++CQG+N SDY+KIGAKLKDLVPCVL+SFE EHILM
Sbjct: 384  AKNGVYTDLVNNVREAFEECELVRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILM 443

Query: 1368 WRGWDWKSSFLKSKDDCMEDRESATDGAIVNHTVADASIVANEETTELIAQDS---LTDD 1538
            WRG DWK    K +D C E +ES  +        ++ASI    E  EL A  S      D
Sbjct: 444  WRGSDWKFLHPKPEDGCKEAKESDNN--------SEASIPPPFEGQELSASCSSKISVKD 495

Query: 1539 ATLETRNASSSSLYSEGV-INRNLGLSSSESEVQYFSATSKDSFVKDACESFTMPNSIRS 1715
             +L+  +  +S + +E V +++   LSS  +++  F    K        ++    +++  
Sbjct: 496  TSLDMLDTIASPVINEDVAMDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSD 555

Query: 1716 YDALVPTVDKRATKNDSVHSSDYES 1790
                    +   TK D+ H +D ES
Sbjct: 556  DTGGTNESEIILTKLDNAHHADDES 580


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  624 bits (1609), Expect = e-176
 Identities = 337/591 (57%), Positives = 405/591 (68%), Gaps = 28/591 (4%)
 Frame = +3

Query: 120  ELRFSRWNNANAEKFTQKQRAQQQIEDDIRHTRRFTSATQITQNYNPAPPHPITVNENFK 299
            ++ FSRWNNANA +F  ++RAQ++IE+DIR  RRF SA  I  NY+ A     T NENFK
Sbjct: 33   DIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNSAANIIDNYDSA-----TSNENFK 87

Query: 300  S--IGTPSSPSRPSIPGKKSKYSKP--PTDH-PAFSKPSKVSISRVPQ---DTPRGVQVS 455
            S  IGTPSSPS PSIPG+KSKYSKP  PT H PAF   SK++   +P+   D    V++S
Sbjct: 88   SKSIGTPSSPSAPSIPGRKSKYSKPESPTSHHPAFRSISKITKKPLPEKPIDRNADVKLS 147

Query: 456  EDGVSYRVPNAPFEFQYSYTETPKVKPLALREPPFVPFGPTTMPRPWTGRAPLSPSKKKL 635
            EDG+S+ V  APFEF+YSYTETPK KP+ LRE PF PFGPTTM RPWTGRAPL PSKKKL
Sbjct: 148  EDGLSFVVDGAPFEFKYSYTETPKAKPIKLREAPFSPFGPTTMGRPWTGRAPLPPSKKKL 207

Query: 636  PEFDSFKLPPPHKKGVKPVQSPGPFLAGMGPKYVQSREEILGDPLMEDEIKELVHGCLKT 815
             EFDSFKLPPP KKGVKPVQ PGPFL G GP+YV SREEILG+PL  +E+K L+ GCLKT
Sbjct: 208  REFDSFKLPPPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCLKT 267

Query: 816  KRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKIIYSR 995
            +RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKC GVCTVDMDNV QQLEE+TGGK+IY +
Sbjct: 268  RRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRK 327

Query: 996  GGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPLLIQQVPEGLTLEEAREMRKRGRELQA 1175
            GG +                  MLWKPVTPVYP LI++ PEGLTLEEA EMR++GR+L  
Sbjct: 328  GGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIP 387

Query: 1176 ICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDLVPCVLVSFEFE 1355
            ICKL KNGVY  LV+ V+EAFEECELVR+DCQG+NGSDY+K+GAKLK+LVPC+L+SFE E
Sbjct: 388  ICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHE 447

Query: 1356 HILMWRGWDWKSSFLKSKDDCME----DRESATDGA---------IVNH----TVADASI 1484
            HILMWRG DWKSS +K  +D +E    D  SAT  A         IV+H    +  D S 
Sbjct: 448  HILMWRGRDWKSSMIKPVNDSVEAIGSDVNSATSIASVLEDQIMEIVSHEDGLSKPDMST 507

Query: 1485 VANEETTELIAQDSLTDDATLETRNASSSSLYSEGVINRNLGLSSSESEVQYF-SATSKD 1661
            +      E     S+ D  ++    +S++   SE       G SS+ SE +   +A   +
Sbjct: 508  IPVGSMDEQAEHPSILDGTSVAIGASSTTVEMSEINPMTESGSSSAVSESEVINNAVGSE 567

Query: 1662 SFVKDACESFTMP--NSIRSYDALVPTVDKRATKNDSVHSSDYESEPTTSS 1808
            S V +   +  MP   S+ S   L     K+   + S+  SD  ++P   S
Sbjct: 568  SVVNNMDPANEMPVAMSVSSETVLESVGSKKELHDVSIECSDDVNKPANLS 618


>ref|XP_002332503.1| predicted protein [Populus trichocarpa] gi|222832483|gb|EEE70960.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score =  623 bits (1607), Expect = e-176
 Identities = 320/489 (65%), Positives = 369/489 (75%), Gaps = 17/489 (3%)
 Frame = +3

Query: 120  ELRFSRWNNANAEKFTQKQRAQQQIEDDIRHTRRFTSATQITQNYNPAPPHPITVNENFK 299
            E+ FSRW NANA+KF Q+ R+QQ+IE+DI   RRFTSA  I  NY+P     + ++  FK
Sbjct: 27   EVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSANNIVTNYDPKNAAEVDISF-FK 85

Query: 300  SIGTPSSPSRPSIPGKKSKYSKP-PTDHPAF-SKPSKVSISR----VPQDTPRGVQVSED 461
            S GTPSSPS PSIPGKKSKYSKP    HPAF  K ++V + R     P D    +++SED
Sbjct: 86   STGTPSSPSSPSIPGKKSKYSKPLKKTHPAFLPKITRVPLPRNNAKPPIDRKADIKLSED 145

Query: 462  GVSYRVPNAPFEFQYSYTETPKVKPLALREPPFVPFGPTTMPRPWTGRAPLSPSKKKLPE 641
            GVSY +  APFEF+YSYTETPKVKPL LRE P+ PFGP TMPRPWTGRAPL PSKKKL E
Sbjct: 146  GVSYVIDGAPFEFKYSYTETPKVKPLKLREAPYAPFGPITMPRPWTGRAPLPPSKKKLRE 205

Query: 642  FDSFKLPPPHKKGVKPVQSPGPFLAGMGPKYVQSREEILGDPLMEDEIKELVHGCLKTKR 821
            FDSF LPPP KKGVKPVQ+PGPFL G GP+Y ++REEILGDPL ++EI+ELV GCLK KR
Sbjct: 206  FDSFVLPPPDKKGVKPVQAPGPFLPGAGPRYAKTREEILGDPLTQEEIQELVDGCLKAKR 265

Query: 822  QLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKIIYSRGG 1001
            QLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV QQLEE+TGGKIIY +GG
Sbjct: 266  QLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEERTGGKIIYRKGG 325

Query: 1002 ALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPLLIQQVPEGLTLEEAREMRKRGRELQAIC 1181
             L                  MLWKPVTPVYP LIQ+ PEGLTL+EA  MR +GR+L  IC
Sbjct: 326  VLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQRAPEGLTLQEASGMRNKGRKLIPIC 385

Query: 1182 KLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDLVPCVLVSFEFEHI 1361
            KLGKNGVY  LV +V+EAFEECELVR++CQGMNGSD++KIGAKL+DLVPCVL+SFE EHI
Sbjct: 386  KLGKNGVYRDLVRNVREAFEECELVRINCQGMNGSDFRKIGAKLRDLVPCVLISFECEHI 445

Query: 1362 LMWRGWDWKSSFLKSKDDCMEDRESATDGA---------IVNHT--VADASIVANEETTE 1508
            LMWRG DWKSSF K  +D  E + S+ DGA         + N T  V DAS + N +T+ 
Sbjct: 446  LMWRGRDWKSSFTKPVNDGDEAKNSSIDGATSATPLLEGLQNETFSVKDASTL-NLKTSR 504

Query: 1509 LIAQDSLTD 1535
            + A+D   D
Sbjct: 505  MDAEDQGED 513


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  610 bits (1574), Expect = e-172
 Identities = 339/627 (54%), Positives = 430/627 (68%), Gaps = 16/627 (2%)
 Frame = +3

Query: 120  ELRFSRWNNANAEKFTQKQRAQQQIEDDIRHTRRFTSATQITQNYNP-APPHPITVNENF 296
            E+RFSRW NANAEKF Q++R+QQ+IED+IR  RRF+SA +I    +  +P   I  NE F
Sbjct: 29   EIRFSRWYNANAEKFEQRRRSQQEIEDEIRRERRFSSAAKIVDLCDSDSPSSAIDRNETF 88

Query: 297  KSIGTPSSPSRPSIPGKKSKYSKPPT-DHPA-FSKPSKVSIS-RVPQDTPRGVQ----VS 455
            +S+GTPSSPSRPSIPG+KSKYSK P  D P+ F + SK   +   P++   GV+    +S
Sbjct: 89   RSVGTPSSPSRPSIPGRKSKYSKNPNPDSPSPFRQVSKTKKTMNAPEERHIGVEANVSLS 148

Query: 456  EDGVSYRVPNAPFEFQYSYTETPKVKPLALREPPFVPFGPTTMPRPWTGRAPLSPSKKKL 635
            EDGVSY +  APFEF+YSYTETPKVKP+ LREP + PFGPTTM RPWTGRAPL PSKKKL
Sbjct: 149  EDGVSYVIDGAPFEFKYSYTETPKVKPIKLREP-YAPFGPTTMSRPWTGRAPLPPSKKKL 207

Query: 636  PEFDSFKLPPPHKKGVKPVQSPGPFLAGMGPKYVQSREEILGDPLMEDEIKELVHGCLKT 815
            PEFDSF+LPP +KKGVKPVQ+PGPFLAG GPKYV SREEILG+PL ++EIK L+ GC+ +
Sbjct: 208  PEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTKEEIKALIRGCINS 267

Query: 816  KRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVRQQLEEKTGGKIIYSR 995
             RQLN+GRDGLTHNML+NIHA WKRRRVCKIKCKGVCTVDMDNV+QQLEE+TGGKIIYSR
Sbjct: 268  NRQLNIGRDGLTHNMLENIHALWKRRRVCKIKCKGVCTVDMDNVKQQLEERTGGKIIYSR 327

Query: 996  GGALXXXXXXXXXXXXXXXXXXMLWKPVTPVYPLLIQQVPEGLTLEEAREMRKRGRELQA 1175
            GGAL                  MLWKP  PVYP L++ +P+GLTLEE  EMRK+GR+L  
Sbjct: 328  GGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVKHIPDGLTLEEVTEMRKKGRKLIP 387

Query: 1176 ICKLGKNGVYSGLVEHVKEAFEECELVRVDCQGMNGSDYKKIGAKLKDLVPCVLVSFEFE 1355
            ICKLGKNGVYS LV+HV+EAFEECELVR++CQG+NGSD++KIGAKLKDLVPCVL+SFE E
Sbjct: 388  ICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGSDFRKIGAKLKDLVPCVLISFESE 447

Query: 1356 HILMWRGWDWKSSFLKSKDDCMEDRESATDGAIVNHTVADASIVANEETTELIAQDSLT- 1532
            HIL+WRG DWKSS        +   E   +GA   H   + +IVA     ++  +++LT 
Sbjct: 448  HILLWRGRDWKSS--------LPYIERNPEGAKA-HGTDETTIVAPSIEQDVSVKNTLTS 498

Query: 1533 -DDATLET-RNASSSSLYSEGVINRNL-GLSSSESEVQYFSATSKDSFVKD-ACESFTMP 1700
             D   L T  N    S+ +E  I+ ++  L+++  E  + S   + + + D    + T  
Sbjct: 499  LDSEDLSTGGNEDPDSMIAEKSISADVDSLTTTMHESNFVSYDEEATGLDDQKLHTATTS 558

Query: 1701 NSIRSYDALVPTVDKRATKNDSVHSSDYESEPTTSSAPKHSAGL---APASDGIAHDDLV 1871
              + S+  +        +  +S   S YE   +     +    L   + A+ G +  + +
Sbjct: 559  EDLDSWSTI--------SGGESEIESGYEFSDSDFDEAEPMEQLEFDSIAATGNSETNGL 610

Query: 1872 TSSEGSESLTKIARLCSTCTDEVVVLM 1952
             +SEGS++LTK     S  TD V+ L+
Sbjct: 611  YTSEGSQALTKPT---SNATDGVLQLL 634