BLASTX nr result
ID: Coptis24_contig00008501
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008501 (631 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW74024.1| hypothetical protein ZEAMMB73_535699 [Zea mays] 48 6e-07 emb|CBI37242.3| unnamed protein product [Vitis vinifera] 59 1e-06 ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi... 59 1e-06 ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801... 58 1e-06 ref|XP_003572942.1| PREDICTED: uncharacterized protein LOC100843... 47 1e-06 >gb|AFW74024.1| hypothetical protein ZEAMMB73_535699 [Zea mays] Length = 1290 Score = 47.8 bits (112), Expect(2) = 6e-07 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = -2 Query: 75 NDRNAVLRARCCDYALLILEYWAD 4 NDR+AVLRARCC+YA L+LEYW D Sbjct: 316 NDRSAVLRARCCEYATLMLEYWVD 339 Score = 31.2 bits (69), Expect(2) = 6e-07 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -1 Query: 154 DNCIKTMLRKCKTARV 107 DNCIK MLR CK AR+ Sbjct: 291 DNCIKEMLRNCKVARI 306 >emb|CBI37242.3| unnamed protein product [Vitis vinifera] Length = 530 Score = 58.5 bits (140), Expect = 1e-06 Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%) Frame = -2 Query: 177 VVIAESAETTA*RRCCVNAKLRVCS-----SNC*FC*K*NDRNAVLRARCCDYALLILEY 13 +VIAESA+ C+ LR C C K NDRNAVLRARCC+Y+LLILEY Sbjct: 200 LVIAESADN------CIKTMLRNCKVARVLPKIADCAK-NDRNAVLRARCCEYSLLILEY 252 Query: 12 WADA 1 WADA Sbjct: 253 WADA 256 >ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera] Length = 1440 Score = 58.5 bits (140), Expect = 1e-06 Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%) Frame = -2 Query: 177 VVIAESAETTA*RRCCVNAKLRVCS-----SNC*FC*K*NDRNAVLRARCCDYALLILEY 13 +VIAESA+ C+ LR C C K NDRNAVLRARCC+Y+LLILEY Sbjct: 385 LVIAESADN------CIKTMLRNCKVARVLPKIADCAK-NDRNAVLRARCCEYSLLILEY 437 Query: 12 WADA 1 WADA Sbjct: 438 WADA 441 >ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max] Length = 1428 Score = 58.2 bits (139), Expect = 1e-06 Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%) Frame = -2 Query: 177 VVIAESAETTA*RRCCVNAKLRVCSS-----NC*FC*K*NDRNAVLRARCCDYALLILEY 13 +VIAESA+ C+ LR C + C K NDRNAVLRARCCDYALLILE+ Sbjct: 385 LVIAESADN------CIKTMLRNCKAARVLPRIADCAK-NDRNAVLRARCCDYALLILEH 437 Query: 12 WADA 1 W DA Sbjct: 438 WPDA 441 >ref|XP_003572942.1| PREDICTED: uncharacterized protein LOC100843375 [Brachypodium distachyon] Length = 1225 Score = 46.6 bits (109), Expect(2) = 1e-06 Identities = 17/24 (70%), Positives = 22/24 (91%) Frame = -2 Query: 75 NDRNAVLRARCCDYALLILEYWAD 4 NDR+A+LR RCC+YA+L+LEYW D Sbjct: 299 NDRSAILRVRCCEYAVLMLEYWVD 322 Score = 31.2 bits (69), Expect(2) = 1e-06 Identities = 12/16 (75%), Positives = 13/16 (81%) Frame = -1 Query: 154 DNCIKTMLRKCKTARV 107 DNCIK MLR CK AR+ Sbjct: 274 DNCIKEMLRNCKVARI 289