BLASTX nr result

ID: Coptis24_contig00008501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008501
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW74024.1| hypothetical protein ZEAMMB73_535699 [Zea mays]         48   6e-07
emb|CBI37242.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vi...    59   1e-06
ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801...    58   1e-06
ref|XP_003572942.1| PREDICTED: uncharacterized protein LOC100843...    47   1e-06

>gb|AFW74024.1| hypothetical protein ZEAMMB73_535699 [Zea mays]
          Length = 1290

 Score = 47.8 bits (112), Expect(2) = 6e-07
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -2

Query: 75  NDRNAVLRARCCDYALLILEYWAD 4
           NDR+AVLRARCC+YA L+LEYW D
Sbjct: 316 NDRSAVLRARCCEYATLMLEYWVD 339



 Score = 31.2 bits (69), Expect(2) = 6e-07
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 154 DNCIKTMLRKCKTARV 107
           DNCIK MLR CK AR+
Sbjct: 291 DNCIKEMLRNCKVARI 306


>emb|CBI37242.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = -2

Query: 177 VVIAESAETTA*RRCCVNAKLRVCS-----SNC*FC*K*NDRNAVLRARCCDYALLILEY 13
           +VIAESA+       C+   LR C           C K NDRNAVLRARCC+Y+LLILEY
Sbjct: 200 LVIAESADN------CIKTMLRNCKVARVLPKIADCAK-NDRNAVLRARCCEYSLLILEY 252

Query: 12  WADA 1
           WADA
Sbjct: 253 WADA 256


>ref|XP_002265367.1| PREDICTED: CLIP-associating protein-like [Vitis vinifera]
          Length = 1440

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = -2

Query: 177 VVIAESAETTA*RRCCVNAKLRVCS-----SNC*FC*K*NDRNAVLRARCCDYALLILEY 13
           +VIAESA+       C+   LR C           C K NDRNAVLRARCC+Y+LLILEY
Sbjct: 385 LVIAESADN------CIKTMLRNCKVARVLPKIADCAK-NDRNAVLRARCCEYSLLILEY 437

Query: 12  WADA 1
           WADA
Sbjct: 438 WADA 441


>ref|XP_003542451.1| PREDICTED: uncharacterized protein LOC100801377 [Glycine max]
          Length = 1428

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
 Frame = -2

Query: 177 VVIAESAETTA*RRCCVNAKLRVCSS-----NC*FC*K*NDRNAVLRARCCDYALLILEY 13
           +VIAESA+       C+   LR C +         C K NDRNAVLRARCCDYALLILE+
Sbjct: 385 LVIAESADN------CIKTMLRNCKAARVLPRIADCAK-NDRNAVLRARCCDYALLILEH 437

Query: 12  WADA 1
           W DA
Sbjct: 438 WPDA 441


>ref|XP_003572942.1| PREDICTED: uncharacterized protein LOC100843375 [Brachypodium
           distachyon]
          Length = 1225

 Score = 46.6 bits (109), Expect(2) = 1e-06
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = -2

Query: 75  NDRNAVLRARCCDYALLILEYWAD 4
           NDR+A+LR RCC+YA+L+LEYW D
Sbjct: 299 NDRSAILRVRCCEYAVLMLEYWVD 322



 Score = 31.2 bits (69), Expect(2) = 1e-06
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -1

Query: 154 DNCIKTMLRKCKTARV 107
           DNCIK MLR CK AR+
Sbjct: 274 DNCIKEMLRNCKVARI 289


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