BLASTX nr result

ID: Coptis24_contig00008499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008499
         (667 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509489.1| lrr receptor protein kinase, putative [Ricin...   266   2e-69
emb|CBI32593.3| unnamed protein product [Vitis vinifera]              265   4e-69
ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine...   265   4e-69
ref|XP_002281409.1| PREDICTED: probable LRR receptor-like serine...   259   3e-67
ref|XP_002306107.1| predicted protein [Populus trichocarpa] gi|2...   258   9e-67

>ref|XP_002509489.1| lrr receptor protein kinase, putative [Ricinus communis]
            gi|223549388|gb|EEF50876.1| lrr receptor protein kinase,
            putative [Ricinus communis]
          Length = 901

 Score =  266 bits (681), Expect = 2e-69
 Identities = 148/206 (71%), Positives = 163/206 (79%), Gaps = 2/206 (0%)
 Frame = +3

Query: 18   GSQPATCAYDVYCFGKVLLELVTGKLGISAPDNATANEWLEQTLPHISIYERELVTKIVD 197
            GS  A CAYDVYCFGKVLLELVTGKLG SA   A   EWLEQTLP+ISIY++ELVTKIVD
Sbjct: 699  GSLTAMCAYDVYCFGKVLLELVTGKLGTSASSEAQLKEWLEQTLPYISIYDKELVTKIVD 758

Query: 198  PSLIVDEDLLEEVWAMAVVAKSCLNPKPSKRPLMRYILKALENPLKVVREENSGSARLRT 377
            PSLIVDEDLLEEVWAMA+VA+SCLNPKPS+RPLMRYILKALENPLKVVREE+S SARLRT
Sbjct: 759  PSLIVDEDLLEEVWAMAIVARSCLNPKPSRRPLMRYILKALENPLKVVREESSSSARLRT 818

Query: 378  TSSRGSWNAALFGSWRHSSSDIAGI-AGPSIR-EGSSSLKQSXXXXXXXXXXXXXXXXXX 551
            TSSRGSWNAA+FGSWR SSSD+A I AG + R EGSSSLK S                  
Sbjct: 819  TSSRGSWNAAIFGSWR-SSSDVAVIPAGSNTRPEGSSSLKHS-GTSNSGGSGQNGGEHSS 876

Query: 552  XNKRLSRDVFPEPASDVLDIERP*QD 629
             ++R SR++FPEP S+  DIER  QD
Sbjct: 877  SHRRYSREIFPEP-SEGQDIERQGQD 901


>emb|CBI32593.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  265 bits (678), Expect = 4e-69
 Identities = 140/203 (68%), Positives = 162/203 (79%), Gaps = 3/203 (1%)
 Frame = +3

Query: 18   GSQPATCAYDVYCFGKVLLELVTGKLGISAPDNATANEWLEQTLPHISIYERELVTKIVD 197
            GS  ATCAYDVYCFGKVLLELVTG+LGISA ++A   EWL+QTLP ISIY++ELV KIVD
Sbjct: 507  GSPSATCAYDVYCFGKVLLELVTGRLGISASNDAQVKEWLDQTLPCISIYDKELVQKIVD 566

Query: 198  PSLIVDEDLLEEVWAMAVVAKSCLNPKPSKRPLMRYILKALENPLKVVREENSGSARLRT 377
            PSLI+DEDLLEEVWAMA+VA+SCLNPK S+RPLMRYILKALENPLKVVREENS SARL+T
Sbjct: 567  PSLIIDEDLLEEVWAMAIVARSCLNPKISRRPLMRYILKALENPLKVVREENSSSARLKT 626

Query: 378  TSSRGSWNAALFGSWRHSSSDIAG--IAGPSIR-EGSSSLKQSXXXXXXXXXXXXXXXXX 548
            TSSRGSWNAALFGSWRHSS D+A   +A  + R EG+SSLKQS                 
Sbjct: 627  TSSRGSWNAALFGSWRHSSLDVAANPVAASTHRIEGTSSLKQSGTTGSQGSGQNGGGDHS 686

Query: 549  XXNKRLSRDVFPEPASDVLDIER 617
               +R S++VFPEP+S + ++ER
Sbjct: 687  SSQRRHSKEVFPEPSS-MQNVER 708


>ref|XP_003631657.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At2g16250-like [Vitis vinifera]
          Length = 908

 Score =  265 bits (678), Expect = 4e-69
 Identities = 140/203 (68%), Positives = 162/203 (79%), Gaps = 3/203 (1%)
 Frame = +3

Query: 18   GSQPATCAYDVYCFGKVLLELVTGKLGISAPDNATANEWLEQTLPHISIYERELVTKIVD 197
            GS  ATCAYDVYCFGKVLLELVTG+LGISA ++A   EWL+QTLP ISIY++ELV KIVD
Sbjct: 703  GSPSATCAYDVYCFGKVLLELVTGRLGISASNDAQVKEWLDQTLPCISIYDKELVQKIVD 762

Query: 198  PSLIVDEDLLEEVWAMAVVAKSCLNPKPSKRPLMRYILKALENPLKVVREENSGSARLRT 377
            PSLI+DEDLLEEVWAMA+VA+SCLNPK S+RPLMRYILKALENPLKVVREENS SARL+T
Sbjct: 763  PSLIIDEDLLEEVWAMAIVARSCLNPKISRRPLMRYILKALENPLKVVREENSSSARLKT 822

Query: 378  TSSRGSWNAALFGSWRHSSSDIAG--IAGPSIR-EGSSSLKQSXXXXXXXXXXXXXXXXX 548
            TSSRGSWNAALFGSWRHSS D+A   +A  + R EG+SSLKQS                 
Sbjct: 823  TSSRGSWNAALFGSWRHSSLDVAANPVAASTHRIEGTSSLKQSGTTGSQGSGQNGGGDHS 882

Query: 549  XXNKRLSRDVFPEPASDVLDIER 617
               +R S++VFPEP+S + ++ER
Sbjct: 883  SSQRRHSKEVFPEPSS-MQNVER 904


>ref|XP_002281409.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At2g16250-like [Vitis vinifera]
          Length = 903

 Score =  259 bits (662), Expect = 3e-67
 Identities = 139/200 (69%), Positives = 153/200 (76%)
 Frame = +3

Query: 18   GSQPATCAYDVYCFGKVLLELVTGKLGISAPDNATANEWLEQTLPHISIYERELVTKIVD 197
            G   ATCAYDVYCFGKVLLELVTGKLGIS  D+AT  EWLE TLP ISIY++ELVTKIVD
Sbjct: 704  GLLSATCAYDVYCFGKVLLELVTGKLGISKSDDATTREWLEHTLPCISIYDKELVTKIVD 763

Query: 198  PSLIVDEDLLEEVWAMAVVAKSCLNPKPSKRPLMRYILKALENPLKVVREENSGSARLRT 377
            PSLIVDEDLLEEVWAMA+VA+SCLNPKPS+RPLMR ILKALENPLKVVREE+S SARLRT
Sbjct: 764  PSLIVDEDLLEEVWAMAIVARSCLNPKPSRRPLMRNILKALENPLKVVREESSSSARLRT 823

Query: 378  TSSRGSWNAALFGSWRHSSSDIAGIAGPSIREGSSSLKQSXXXXXXXXXXXXXXXXXXXN 557
            TSSR SW+ A FGSWRHSSS+ A + G   REG S  KQS                   +
Sbjct: 824  TSSRRSWSTAFFGSWRHSSSEGAIVPGQINREGISGSKQS---GRVGSQGSGGNDLSSSH 880

Query: 558  KRLSRDVFPEPASDVLDIER 617
            KR S ++FPEP  D+ DIER
Sbjct: 881  KRSSNEIFPEPV-DMQDIER 899


>ref|XP_002306107.1| predicted protein [Populus trichocarpa] gi|222849071|gb|EEE86618.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  258 bits (658), Expect = 9e-67
 Identities = 138/201 (68%), Positives = 156/201 (77%), Gaps = 2/201 (0%)
 Frame = +3

Query: 21  SQPATCAYDVYCFGKVLLELVTGKLGISAPDNATANEWLEQTLPHISIYERELVTKIVDP 200
           S  ATCAYDVYCFGKVLLELVTGKLGISA  +A   E+ EQ LP+ISIY++EL+ KIVDP
Sbjct: 18  SLTATCAYDVYCFGKVLLELVTGKLGISASSDAQLKEFSEQILPYISIYDKELLIKIVDP 77

Query: 201 SLIVDEDLLEEVWAMAVVAKSCLNPKPSKRPLMRYILKALENPLKVVREENSGSARLRTT 380
           SLI+DEDLLEEVWAMA+VA+SCLNPKPS+RP+MRYILKALENPLKVVREENSGSARLRTT
Sbjct: 78  SLIIDEDLLEEVWAMAIVARSCLNPKPSRRPIMRYILKALENPLKVVREENSGSARLRTT 137

Query: 381 SSRGSWNAALFGSWRHSSSDIAGIAGPSIR--EGSSSLKQSXXXXXXXXXXXXXXXXXXX 554
           SSR SWNA+LFGSWRHSSSD+A I   S    EG SS K+S                   
Sbjct: 138 SSR-SWNASLFGSWRHSSSDVAVIPATSSARPEGGSSFKRSGTSNSQGSGQNGSGNHSSS 196

Query: 555 NKRLSRDVFPEPASDVLDIER 617
            +R SR++FPEP SD  D+ER
Sbjct: 197 MRRHSREIFPEP-SDEQDVER 216


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