BLASTX nr result
ID: Coptis24_contig00008498
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008498 (1823 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276161.1| PREDICTED: eukaryotic translation initiation... 775 0.0 ref|XP_002530577.1| Eukaryotic translation initiation factor 3 s... 753 0.0 ref|XP_002330655.1| predicted protein [Populus trichocarpa] gi|2... 744 0.0 ref|XP_003518869.1| PREDICTED: eukaryotic translation initiation... 741 0.0 ref|XP_003529378.1| PREDICTED: eukaryotic translation initiation... 739 0.0 >ref|XP_002276161.1| PREDICTED: eukaryotic translation initiation factor 2A isoform 1 [Vitis vinifera] gi|359478324|ref|XP_003632107.1| PREDICTED: eukaryotic translation initiation factor 2A isoform 2 [Vitis vinifera] gi|296084282|emb|CBI24670.3| unnamed protein product [Vitis vinifera] Length = 518 Score = 775 bits (2002), Expect = 0.0 Identities = 372/493 (75%), Positives = 429/493 (87%), Gaps = 1/493 (0%) Frame = +1 Query: 172 DPSPPLQILAREPDGFCLWTGLPFNNGQPSMKLEKVHCSNSKFSEDGSTLMVIKPDSTIG 351 D P L+IL R P+GF LW G PFNNGQP++KLEKV C+N+KFSEDGS LMV+K DST+ Sbjct: 2 DSVPSLEILVRAPEGFSLWCGPPFNNGQPAVKLEKVICTNAKFSEDGSRLMVMKSDSTVS 61 Query: 352 LYDCTTYSEIRSFAIPNALAATLSPRGTYLQTFQKSSTPQEKNLVLWNIHTGTPVYQLFQ 531 +YDC++ EIRSFA+PN AAT+SP GTYLQTFQ+ STPQEKN++LW TG PVYQ FQ Sbjct: 62 IYDCSSSKEIRSFAVPNMSAATMSPCGTYLQTFQRPSTPQEKNVILWKTETGAPVYQHFQ 121 Query: 532 KNMSKTTWPSIQFSSDEAVACRLATNEIQFFDTGDFSKGFTYRLRIPGIAAVELSKAPGS 711 KNM+KTTWPS+QFSSDEA+ACRLATNEIQFFD DFSK YR+RIPGIAAVELSKAPGS Sbjct: 122 KNMTKTTWPSVQFSSDEAIACRLATNEIQFFDARDFSKEIIYRVRIPGIAAVELSKAPGS 181 Query: 712 HVAAFVVESKGIPASIQIFSCAKDEQAQAVARRGFFRCSTVQMSWNYGSSGLLVVAQSDV 891 HVAAF+ ESKGIPAS+QIF+C ++ +Q VARR FFRCSTVQ+SWN GS+GLLV+ Q+DV Sbjct: 182 HVAAFIPESKGIPASVQIFACGENSMSQPVARRSFFRCSTVQLSWNRGSTGLLVLVQADV 241 Query: 892 DKTNQSYYGESKLNYLTTDGAHEGLVPLRKEGPVHDVRWSSTGSEFAVVYGFMPARATMF 1071 DKTNQSY+GESKLNYLTT+G HEGLVPL KEGPVHDV+WS +GSEFAVVYGFMPA+AT+F Sbjct: 242 DKTNQSYFGESKLNYLTTNGTHEGLVPLSKEGPVHDVQWSYSGSEFAVVYGFMPAKATVF 301 Query: 1072 DKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDVAFWDYTEKKLVGTTKAELSVT 1251 DKKCNPL+ELGTGPYNTIRWNPKGKFLCLAGFGNLPGD+AFWDY EKK +GTT+AE SVT Sbjct: 302 DKKCNPLVELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMAFWDYKEKKQLGTTRAEWSVT 361 Query: 1252 SEWSPDGRYFMTATTAPRLQVDNGIKIFHHDGSLHFKKMFDKLYQAEWKPDAPERFSDIA 1431 SEWSPDG YFMTATTAPRLQVDNGIKIFH +GSL+FK MFDKLYQA+WKP++P+RF +IA Sbjct: 362 SEWSPDGCYFMTATTAPRLQVDNGIKIFHPNGSLYFKTMFDKLYQADWKPESPDRFGEIA 421 Query: 1432 ELVQSIGSLKIEATKTQGKGSKST-QPSVSTSAPNTLVQKPSAYQPPHAKAAVAVQAQLF 1608 EL QSI SLK+ TK QG+GSKS+ P+ +TSA N QKP+AY+PPHAK A A+Q +LF Sbjct: 422 ELAQSIDSLKVGETKQQGQGSKSSVAPNKATSA-NPPTQKPAAYRPPHAKTAAAIQTKLF 480 Query: 1609 GGGGPTEELSKNA 1647 GG TEE+SKNA Sbjct: 481 GGSS-TEEMSKNA 492 >ref|XP_002530577.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] gi|223529876|gb|EEF31807.1| Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] Length = 584 Score = 753 bits (1945), Expect = 0.0 Identities = 362/535 (67%), Positives = 429/535 (80%) Frame = +1 Query: 46 RYALSAASTAFSHSPVKLLLSFSFPFLCANYYYR*LIIMAVRDPSPPLQILAREPDGFCL 225 RY L + + F L F + C + L + A+ S ++IL R P+GFC+ Sbjct: 34 RYLLPSPAGPFEEQYTSCQLQFWIAYTCLVFRGSGLFMAAMNHTSASMEILVRGPEGFCV 93 Query: 226 WTGLPFNNGQPSMKLEKVHCSNSKFSEDGSTLMVIKPDSTIGLYDCTTYSEIRSFAIPNA 405 W G PF N +P++KLE V C+++KFSEDGS LMV+K D I +YDC+++ E+RSF +PN Sbjct: 94 WNGPPFGNAEPTIKLETVPCNSAKFSEDGSKLMVMKSDFIISIYDCSSFKELRSFQVPNV 153 Query: 406 LAATLSPRGTYLQTFQKSSTPQEKNLVLWNIHTGTPVYQLFQKNMSKTTWPSIQFSSDEA 585 LAA LSP GTYLQTFQK S PQ+KN+VLW G +Y QKNM+K TWPSI+FS DEA Sbjct: 154 LAAALSPCGTYLQTFQKPSAPQDKNVVLWKTENGDAIYHQSQKNMTKMTWPSIRFSYDEA 213 Query: 586 VACRLATNEIQFFDTGDFSKGFTYRLRIPGIAAVELSKAPGSHVAAFVVESKGIPASIQI 765 V+CRLATNEIQFFD DFSKG +RLRIPG+AA+ELS PGSHVAAFV ESKG PAS+QI Sbjct: 214 VSCRLATNEIQFFDPKDFSKGIVHRLRIPGLAALELSMVPGSHVAAFVPESKGSPASVQI 273 Query: 766 FSCAKDEQAQAVARRGFFRCSTVQMSWNYGSSGLLVVAQSDVDKTNQSYYGESKLNYLTT 945 F+C KD Q+Q VARR FFRCSTVQ++WN GS+GLLVV QSD DKTNQSYYGESKLNYLTT Sbjct: 274 FACTKDMQSQPVARRSFFRCSTVQLNWNRGSTGLLVVVQSDFDKTNQSYYGESKLNYLTT 333 Query: 946 DGAHEGLVPLRKEGPVHDVRWSSTGSEFAVVYGFMPARATMFDKKCNPLLELGTGPYNTI 1125 DG HEGLVPLRKEGP+HDV+WS +GS+FAVVYGFMPA AT+FDKKCNPLLELGTGPYNT+ Sbjct: 334 DGTHEGLVPLRKEGPIHDVQWSYSGSQFAVVYGFMPASATLFDKKCNPLLELGTGPYNTV 393 Query: 1126 RWNPKGKFLCLAGFGNLPGDVAFWDYTEKKLVGTTKAELSVTSEWSPDGRYFMTATTAPR 1305 RWNPKGKFLCLAGFGNLPGD+AFWDY KK +GTT+AE SVTSEWSPDG YFMTATTAPR Sbjct: 394 RWNPKGKFLCLAGFGNLPGDMAFWDYVNKKQLGTTRAECSVTSEWSPDGCYFMTATTAPR 453 Query: 1306 LQVDNGIKIFHHDGSLHFKKMFDKLYQAEWKPDAPERFSDIAELVQSIGSLKIEATKTQG 1485 LQVDNGIKIFH++GSL+FKKMF KLYQAEWKP++P++F +IAEL +S+ SLKIE TK QG Sbjct: 454 LQVDNGIKIFHYNGSLYFKKMFGKLYQAEWKPESPDKFDEIAELAKSVDSLKIEETKLQG 513 Query: 1486 KGSKSTQPSVSTSAPNTLVQKPSAYQPPHAKAAVAVQAQLFGGGGPTEELSKNAL 1650 +G+ S + T+ N QKP+AY+PPHAK+A AVQA+LFGG TE++SKNAL Sbjct: 514 QGATSRK----TAPTNPPAQKPAAYRPPHAKSAAAVQAELFGGSS-TEQMSKNAL 563 >ref|XP_002330655.1| predicted protein [Populus trichocarpa] gi|222872259|gb|EEF09390.1| predicted protein [Populus trichocarpa] Length = 474 Score = 744 bits (1920), Expect = 0.0 Identities = 350/484 (72%), Positives = 412/484 (85%), Gaps = 2/484 (0%) Frame = +1 Query: 160 MAVRDPSPPLQILAREPDGFCLWTGLPFNNGQPSMKLEKVHCSNSKFSEDGSTLMVIKPD 339 MA +D +P L IL R P+G +W G PF NG+PS+KLE+V CS +KFSEDGS L+V+K D Sbjct: 1 MAAKDTAPSLDILVRGPEGCFVWNGPPFGNGEPSVKLERVPCSRAKFSEDGSRLLVMKSD 60 Query: 340 STIGLYDCTTYSEIRSFAIPNALAATLSPRGTYLQTFQKSSTPQEKNLVLWNIHTGTPVY 519 I +YDC+++ EI+SF +PN LAA LSP GTYLQTFQKSSTPQ KNLVLW I +G VY Sbjct: 61 FVISIYDCSSFKEIKSFQVPNVLAAVLSPCGTYLQTFQKSSTPQNKNLVLWKIESGDSVY 120 Query: 520 QLFQKNMSKTTWPSIQFSSDEAVACRLATNEIQFFDTGDFSKGFTYRLRIPGIAAVELSK 699 Q FQKNM+KTTWPSI+ SSDEA+ACR+ATNEIQFFD DFSKG +R+R+PG+AAVELS Sbjct: 121 QQFQKNMTKTTWPSIRLSSDEAIACRMATNEIQFFDPKDFSKGIVHRIRVPGVAAVELSM 180 Query: 700 APGSHVAAFVVESKGIPASIQIFSCAKDEQAQAVARRGFFRCSTVQMSWNYGSSGLLVVA 879 PGSHVAAF+ ESKG+PAS+QIF+C K+ Q+Q VARR FFRC TVQ+ WN GS+GLL VA Sbjct: 181 VPGSHVAAFIPESKGVPASVQIFACGKEMQSQPVARRSFFRCDTVQLKWNRGSTGLLAVA 240 Query: 880 QSDVDKTNQSYYGESKLNYLTTDGAHEGLVPLRKEGPVHDVRWSSTGSEFAVVYGFMPAR 1059 QSDVDKTNQSYYGESKLNYLTT+G+HEGLVPLRKEGP+HDV+WS +GSEFAVVYGFMPA Sbjct: 241 QSDVDKTNQSYYGESKLNYLTTNGSHEGLVPLRKEGPIHDVQWSCSGSEFAVVYGFMPAS 300 Query: 1060 ATMFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDVAFWDYTEKKLVGTTKAE 1239 AT+FDKKC+PLLELGTGPYNT+RWNPKGKFLCLAGFGNLPGD+AFWDY +KK +GTTKAE Sbjct: 301 ATLFDKKCHPLLELGTGPYNTVRWNPKGKFLCLAGFGNLPGDMAFWDYVDKKQIGTTKAE 360 Query: 1240 LSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHDGSLHFKKMFDKLYQAEWKPDAPERF 1419 SVTSEWSPDG YFMTATTAPRLQVDNGIKIFHH+GSL+FKKMFDKLY+ EWKP++P+RF Sbjct: 361 WSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHHNGSLYFKKMFDKLYEVEWKPESPDRF 420 Query: 1420 SDIAELVQSIGSLKIEATKTQGKG--SKSTQPSVSTSAPNTLVQKPSAYQPPHAKAAVAV 1593 +IAEL++S+ SLK+ TK+QG+G SK T P+ QKP+AY+PP AKAA AV Sbjct: 421 GEIAELIKSVDSLKVTETKSQGQGAASKKTAPA----------QKPAAYRPPQAKAAAAV 470 Query: 1594 QAQL 1605 QA++ Sbjct: 471 QAEV 474 >ref|XP_003518869.1| PREDICTED: eukaryotic translation initiation factor 2A-like [Glycine max] Length = 518 Score = 741 bits (1912), Expect = 0.0 Identities = 358/518 (69%), Positives = 413/518 (79%), Gaps = 1/518 (0%) Frame = +1 Query: 160 MAVRDPSPPLQILAREPDGFCLWTGLPFNNGQPSMKLEKVHCSNSKFSEDGSTLMVIKPD 339 MA + SPPL+IL R P+ F LWTG PF NGQPS+KLEKV C N+KFS+DGS LMV K + Sbjct: 1 MASNNHSPPLEILVRGPEDFSLWTGPPFANGQPSIKLEKVKCINAKFSDDGSKLMVTKSN 60 Query: 340 STIGLYDCTTYSEIRSFAIPNALAATLSPRGTYLQTFQKSSTPQEKNLVLWNIHTGTPVY 519 S I +YDC EIR+F +PN +AA LSP GTYLQTFQK S PQEKN+ LW+I TG V+ Sbjct: 61 SLISVYDCRIAEEIRAFEVPNVVAAALSPNGTYLQTFQKPSAPQEKNVTLWSIETGAAVH 120 Query: 520 QLFQKNMSKTTWPSIQFSSDEAVACRLATNEIQFFDTGDFSKGFTYRLRIPGIAAVELSK 699 Q QKNM+K WP+IQFSSDEA ACRLATNE+QFFDTGDFSKG RLR+PG+AA ELS Sbjct: 121 QQSQKNMTKANWPAIQFSSDEATACRLATNEVQFFDTGDFSKGVVCRLRVPGVAAAELSS 180 Query: 700 APGSHVAAFVVESKGIPASIQIFSCAKDEQAQAVARRGFFRCSTVQMSWNYGSSGLLVVA 879 PGSHVAAFV ESKG+PAS+QIF+C Q+Q VARR FFRCST Q+ WN+GS+GLLVV Sbjct: 181 LPGSHVAAFVPESKGVPASVQIFACGNASQSQPVARRSFFRCSTTQLKWNHGSTGLLVVV 240 Query: 880 QSDVDKTNQSYYGESKLNYLTTDGAHEGLVPLRKEGPVHDVRWSSTGSEFAVVYGFMPAR 1059 QSDVDKTNQSYYGESKL YLTTDG HEGLVPLRK+GP+HD +WS +G EFAVVYGFMPA+ Sbjct: 241 QSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAK 300 Query: 1060 ATMFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDVAFWDYTEKKLVGTTKAE 1239 AT+FDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGD+ FWDY +KK +G TKAE Sbjct: 301 ATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGATKAE 360 Query: 1240 LSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHDGSLHFKKMFDKLYQAEWKPDAPERF 1419 SVTSEWSPDG YFMTATTAPRLQVDNGIKIFH++GSL+FKKMFDKLYQ +WKP++P +F Sbjct: 361 WSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPESPGKF 420 Query: 1420 SDIAELVQSIGSLKIEATKTQGKG-SKSTQPSVSTSAPNTLVQKPSAYQPPHAKAAVAVQ 1596 DIAEL++S+ +++E K G+G KSTQ S S+ N QKP+AY+PPHAK A A+Q Sbjct: 421 GDIAELIKSLNLVQLEDKKPSGQGPPKSTQTSTKASSANPTTQKPAAYRPPHAKNASAIQ 480 Query: 1597 AQLFGGGGPTEELSKNALXXXXXXXXXXXXXATEDPST 1710 A+LF G E LSKNAL A D S+ Sbjct: 481 AELF-GETTAETLSKNALRNKKKREKQKEKKAASDASS 517 >ref|XP_003529378.1| PREDICTED: eukaryotic translation initiation factor 2A-like [Glycine max] Length = 517 Score = 739 bits (1909), Expect = 0.0 Identities = 356/498 (71%), Positives = 409/498 (82%), Gaps = 1/498 (0%) Frame = +1 Query: 160 MAVRDPSPPLQILAREPDGFCLWTGLPFNNGQPSMKLEKVHCSNSKFSEDGSTLMVIKPD 339 MA SP L+IL R P+ F LWTG PF N QPS+KLEKV+C N+KFS+DGS LMV K + Sbjct: 1 MASNSHSPSLEILVRGPEDFSLWTGPPFANDQPSVKLEKVNCINAKFSDDGSNLMVTKSN 60 Query: 340 STIGLYDCTTYSEIRSFAIPNALAATLSPRGTYLQTFQKSSTPQEKNLVLWNIHTGTPVY 519 S I +YDC+T EIR F +PN +AA LSP+GTYLQTFQK S PQEKN+ LW+I TG VY Sbjct: 61 SLISVYDCSTAKEIRVFEVPNVVAAALSPKGTYLQTFQKPSGPQEKNVTLWSIETGAAVY 120 Query: 520 QLFQKNMSKTTWPSIQFSSDEAVACRLATNEIQFFDTGDFSKGFTYRLRIPGIAAVELSK 699 Q QKNM+K WP+IQFSSDEA CRLATNE+QFFDTGDFSKG RLR+ G+AA ELS Sbjct: 121 QQSQKNMTKANWPAIQFSSDEATVCRLATNEVQFFDTGDFSKGVVCRLRVQGVAAAELSS 180 Query: 700 APGSHVAAFVVESKGIPASIQIFSCAKDEQAQAVARRGFFRCSTVQMSWNYGSSGLLVVA 879 PGSHVAAFV ESKGIPAS+QIF+C Q+Q VARR FFRCST Q+ WN+GS+GLLVV Sbjct: 181 LPGSHVAAFVPESKGIPASVQIFACGNASQSQPVARRSFFRCSTTQLKWNHGSTGLLVVV 240 Query: 880 QSDVDKTNQSYYGESKLNYLTTDGAHEGLVPLRKEGPVHDVRWSSTGSEFAVVYGFMPAR 1059 QSDVDKTNQSYYGESKL YLTTDG HEGLVPLRK+GP+HD +WS +G EFAVVYGFMPA+ Sbjct: 241 QSDVDKTNQSYYGESKLCYLTTDGMHEGLVPLRKDGPIHDAQWSYSGLEFAVVYGFMPAK 300 Query: 1060 ATMFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDVAFWDYTEKKLVGTTKAE 1239 AT+FDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGD+ FWDY +KK +G TKAE Sbjct: 301 ATLFDKKCNPLLELGTGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYIDKKQLGATKAE 360 Query: 1240 LSVTSEWSPDGRYFMTATTAPRLQVDNGIKIFHHDGSLHFKKMFDKLYQAEWKPDAPERF 1419 SVTSEWSPDG YFMTATTAPRLQVDNGIKIFH++GSL+FKKMFDKLYQA+WKP++P +F Sbjct: 361 WSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQADWKPESPSKF 420 Query: 1420 SDIAELVQSIGSLKIEATKTQGKG-SKSTQPSVSTSAPNTLVQKPSAYQPPHAKAAVAVQ 1596 DIAEL++S+ +++E K G+G KSTQ S S+ N QKP+AY+PPHAK A A+Q Sbjct: 421 GDIAELIKSLNLVQLEDKKPSGQGPPKSTQTSTKASSTNPPTQKPAAYRPPHAKNASAIQ 480 Query: 1597 AQLFGGGGPTEELSKNAL 1650 A+LF G P E LSKNAL Sbjct: 481 AELF-GETPAEPLSKNAL 497