BLASTX nr result
ID: Coptis24_contig00008494
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008494 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik... 75 7e-12 emb|CAN75738.1| hypothetical protein VITISV_025903 [Vitis vinifera] 74 2e-11 emb|CBI29964.3| unnamed protein product [Vitis vinifera] 73 3e-11 ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik... 69 3e-10 ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik... 69 3e-10 >ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera] Length = 1387 Score = 74.7 bits (182), Expect = 7e-12 Identities = 43/72 (59%), Positives = 47/72 (65%) Frame = -3 Query: 239 RGRTCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRV 60 R R AGVS+ILD DML QFLELT++QQEAVL LG + I VNRV Sbjct: 1316 RSRENSAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRV 1375 Query: 59 VQLLERVHYALN 24 VQLLERVHYALN Sbjct: 1376 VQLLERVHYALN 1387 >emb|CAN75738.1| hypothetical protein VITISV_025903 [Vitis vinifera] Length = 501 Score = 73.6 bits (179), Expect = 2e-11 Identities = 42/69 (60%), Positives = 46/69 (66%) Frame = -3 Query: 230 TCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRVVQL 51 T AGVS+ILD DML QFLELT++QQEAVL LG + I VNRVVQL Sbjct: 433 TSHAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQL 492 Query: 50 LERVHYALN 24 LERVHYALN Sbjct: 493 LERVHYALN 501 >emb|CBI29964.3| unnamed protein product [Vitis vinifera] Length = 1363 Score = 72.8 bits (177), Expect = 3e-11 Identities = 41/66 (62%), Positives = 45/66 (68%) Frame = -3 Query: 221 AGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRVVQLLER 42 AGVS+ILD DML QFLELT++QQEAVL LG + I VNRVVQLLER Sbjct: 1298 AGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQLLER 1357 Query: 41 VHYALN 24 VHYALN Sbjct: 1358 VHYALN 1363 >ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus] Length = 158 Score = 69.3 bits (168), Expect = 3e-10 Identities = 39/72 (54%), Positives = 47/72 (65%) Frame = -3 Query: 239 RGRTCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRV 60 R R P GV +ILD D+L QFLELT++QQE VL S+G A IP+N+V Sbjct: 88 RSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVG-SLSAVKPSSKSMPASIPINQV 146 Query: 59 VQLLERVHYALN 24 VQLLER+HYALN Sbjct: 147 VQLLERIHYALN 158 >ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus] Length = 1376 Score = 69.3 bits (168), Expect = 3e-10 Identities = 39/72 (54%), Positives = 47/72 (65%) Frame = -3 Query: 239 RGRTCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRV 60 R R P GV +ILD D+L QFLELT++QQE VL S+G A IP+N+V Sbjct: 1306 RSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVG-SLSAVKPSSKSMPASIPINQV 1364 Query: 59 VQLLERVHYALN 24 VQLLER+HYALN Sbjct: 1365 VQLLERIHYALN 1376