BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008494
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...    75   7e-12
emb|CAN75738.1| hypothetical protein VITISV_025903 [Vitis vinifera]    74   2e-11
emb|CBI29964.3| unnamed protein product [Vitis vinifera]               73   3e-11
ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...    69   3e-10
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...    69   3e-10

>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/72 (59%), Positives = 47/72 (65%)
 Frame = -3

Query: 239  RGRTCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRV 60
            R R   AGVS+ILD DML QFLELT++QQEAVL   LG              + I VNRV
Sbjct: 1316 RSRENSAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRV 1375

Query: 59   VQLLERVHYALN 24
            VQLLERVHYALN
Sbjct: 1376 VQLLERVHYALN 1387


>emb|CAN75738.1| hypothetical protein VITISV_025903 [Vitis vinifera]
          Length = 501

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/69 (60%), Positives = 46/69 (66%)
 Frame = -3

Query: 230 TCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRVVQL 51
           T  AGVS+ILD DML QFLELT++QQEAVL   LG              + I VNRVVQL
Sbjct: 433 TSHAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQL 492

Query: 50  LERVHYALN 24
           LERVHYALN
Sbjct: 493 LERVHYALN 501


>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/66 (62%), Positives = 45/66 (68%)
 Frame = -3

Query: 221  AGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRVVQLLER 42
            AGVS+ILD DML QFLELT++QQEAVL   LG              + I VNRVVQLLER
Sbjct: 1298 AGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSPISVNRVVQLLER 1357

Query: 41   VHYALN 24
            VHYALN
Sbjct: 1358 VHYALN 1363


>ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 158

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/72 (54%), Positives = 47/72 (65%)
 Frame = -3

Query: 239 RGRTCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRV 60
           R R  P GV +ILD D+L QFLELT++QQE VL  S+G              A IP+N+V
Sbjct: 88  RSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVG-SLSAVKPSSKSMPASIPINQV 146

Query: 59  VQLLERVHYALN 24
           VQLLER+HYALN
Sbjct: 147 VQLLERIHYALN 158


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/72 (54%), Positives = 47/72 (65%)
 Frame = -3

Query: 239  RGRTCPAGVSQILDCDMLLQFLELTNLQQEAVLEFSLGMXXXXXXXXXXXSQAHIPVNRV 60
            R R  P GV +ILD D+L QFLELT++QQE VL  S+G              A IP+N+V
Sbjct: 1306 RSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVG-SLSAVKPSSKSMPASIPINQV 1364

Query: 59   VQLLERVHYALN 24
            VQLLER+HYALN
Sbjct: 1365 VQLLERIHYALN 1376