BLASTX nr result

ID: Coptis24_contig00008493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008493
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29439.3| unnamed protein product [Vitis vinifera]              156   1e-36
ref|XP_002271813.1| PREDICTED: uncharacterized protein LOC100249...   156   1e-36
ref|XP_002318115.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002321680.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_003560593.1| PREDICTED: uncharacterized protein LOC100828...   122   4e-26

>emb|CBI29439.3| unnamed protein product [Vitis vinifera]
          Length = 794

 Score =  156 bits (395), Expect = 1e-36
 Identities = 83/134 (61%), Positives = 101/134 (75%)
 Frame = -2

Query: 403 ALTDEEPRDTHAHKNGTERTIRAVYSQKKTEHPTSDGAQTGMYQVMREQLRHAVEDIRTE 224
           A+TD+E RD  + KNG  +TIRAVY+QKK EHPT D    G+Y+ MR++LRHAVE+I+ E
Sbjct: 439 AVTDDEARDGCSSKNGIVKTIRAVYAQKKAEHPTGDDVNGGLYEAMRKELRHAVEEIKME 498

Query: 223 IEQGIVKSNHSVLAIDSCFQSQDSDVLQAVSVIRQNYTAKLEQSEKRKQDLLAEIVAEEQ 44
           +EQ +  +N S        QS +SDVL  VS +R+NY  KLEQSEKRKQDLLAEI+ EEQ
Sbjct: 499 LEQAMANTNTS----GDHLQSNNSDVLD-VSTVRRNYATKLEQSEKRKQDLLAEILLEEQ 553

Query: 43  RGRELSKIVKELLP 2
           RGRELSKIVKELLP
Sbjct: 554 RGRELSKIVKELLP 567


>ref|XP_002271813.1| PREDICTED: uncharacterized protein LOC100249354 [Vitis vinifera]
          Length = 572

 Score =  156 bits (395), Expect = 1e-36
 Identities = 83/134 (61%), Positives = 101/134 (75%)
 Frame = -2

Query: 403 ALTDEEPRDTHAHKNGTERTIRAVYSQKKTEHPTSDGAQTGMYQVMREQLRHAVEDIRTE 224
           A+TD+E RD  + KNG  +TIRAVY+QKK EHPT D    G+Y+ MR++LRHAVE+I+ E
Sbjct: 217 AVTDDEARDGCSSKNGIVKTIRAVYAQKKAEHPTGDDVNGGLYEAMRKELRHAVEEIKME 276

Query: 223 IEQGIVKSNHSVLAIDSCFQSQDSDVLQAVSVIRQNYTAKLEQSEKRKQDLLAEIVAEEQ 44
           +EQ +  +N S        QS +SDVL  VS +R+NY  KLEQSEKRKQDLLAEI+ EEQ
Sbjct: 277 LEQAMANTNTS----GDHLQSNNSDVLD-VSTVRRNYATKLEQSEKRKQDLLAEILLEEQ 331

Query: 43  RGRELSKIVKELLP 2
           RGRELSKIVKELLP
Sbjct: 332 RGRELSKIVKELLP 345


>ref|XP_002318115.1| predicted protein [Populus trichocarpa] gi|222858788|gb|EEE96335.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/133 (55%), Positives = 99/133 (74%)
 Frame = -2

Query: 403 ALTDEEPRDTHAHKNGTERTIRAVYSQKKTEHPTSDGAQTGMYQVMREQLRHAVEDIRTE 224
           +LTD+E +D  ++K+G ERTIR VY+QKK EHPT +   +G+Y+ MR++LRHAVE+I+ E
Sbjct: 217 SLTDDEGKDASSNKHGFERTIRTVYAQKKAEHPTGEDMNSGLYEAMRKELRHAVEEIKME 276

Query: 223 IEQGIVKSNHSVLAIDSCFQSQDSDVLQAVSVIRQNYTAKLEQSEKRKQDLLAEIVAEEQ 44
           +E    K+N        C QS  S+V QA S IR+N+ AK EQSEKRKQDLLA+++ EEQ
Sbjct: 277 LEHSRGKTN------ADCLQSGKSNVFQAGSTIRRNHAAKSEQSEKRKQDLLAKLLLEEQ 330

Query: 43  RGRELSKIVKELL 5
            GR++SKIVKELL
Sbjct: 331 HGRDISKIVKELL 343


>ref|XP_002321680.1| predicted protein [Populus trichocarpa] gi|222868676|gb|EEF05807.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  139 bits (349), Expect = 3e-31
 Identities = 75/134 (55%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
 Frame = -2

Query: 403 ALTDEEPRDTHAHKNGTERTIRAVYSQKKTEHPTSDGAQTGMYQVMREQLRHAVEDIRTE 224
           +LTD+E RD+ ++KNG ERTIR VY+QKK EHPT D   +G+Y+ MR++LRHAVE+IR E
Sbjct: 217 SLTDDEGRDSCSNKNGFERTIRTVYAQKKAEHPTGDDMNSGLYEAMRKELRHAVEEIRME 276

Query: 223 IEQGIVKSNHSVLAIDSCFQSQDSDVLQAVS-VIRQNYTAKLEQSEKRKQDLLAEIVAEE 47
           +EQ + K+N     IDS  +S  SD  Q  S +IR+N+  K +QSEK KQDLLA+++ E+
Sbjct: 277 LEQSMEKTN-----IDS-LKSGKSDGFQGGSTIIRRNHATKSDQSEKCKQDLLAKLLLEK 330

Query: 46  QRGRELSKIVKELL 5
           Q GR++SKIVKELL
Sbjct: 331 QHGRDISKIVKELL 344


>ref|XP_003560593.1| PREDICTED: uncharacterized protein LOC100828748 [Brachypodium
           distachyon]
          Length = 602

 Score =  122 bits (305), Expect = 4e-26
 Identities = 64/134 (47%), Positives = 92/134 (68%)
 Frame = -2

Query: 403 ALTDEEPRDTHAHKNGTERTIRAVYSQKKTEHPTSDGAQTGMYQVMREQLRHAVEDIRTE 224
           +LTD+E RDTH+  +      RAVY+Q+K   P  D     +Y VMR+++R AVE+IRT+
Sbjct: 268 SLTDDESRDTHSFHSRNHNGTRAVYTQEK--QPIDDEDSNVLYDVMRKEVRQAVEEIRTQ 325

Query: 223 IEQGIVKSNHSVLAIDSCFQSQDSDVLQAVSVIRQNYTAKLEQSEKRKQDLLAEIVAEEQ 44
           +E+ + KS  S  A      S D+   + +  +R++YT+KLE+SEKRKQ+LLA++ AEEQ
Sbjct: 326 LEKAVTKSEPSEKA-----NSDDAQPAEVIGELRRSYTSKLEESEKRKQELLAQLAAEEQ 380

Query: 43  RGRELSKIVKELLP 2
           RG +L+KIVKELLP
Sbjct: 381 RGHQLTKIVKELLP 394


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