BLASTX nr result

ID: Coptis24_contig00008476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008476
         (2211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/...   590   0.0  
emb|CBI29762.3| unnamed protein product [Vitis vinifera]              590   0.0  
gb|ABK95478.1| unknown [Populus trichocarpa]                          557   0.0  
ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ri...   550   0.0  
ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|2...   553   0.0  

>ref|XP_002265950.2| PREDICTED: putative hydroxymethylpyrimidine/phosphomethylpyrimidine
            kinase 2-like [Vitis vinifera]
          Length = 681

 Score =  590 bits (1522), Expect(2) = 0.0
 Identities = 292/383 (76%), Positives = 334/383 (87%)
 Frame = +1

Query: 493  ILADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVL 672
            +LA PSIL AFREELLPMADIVTPNLKEASALLGG++L TV+DMC+AAK IHD+GPR VL
Sbjct: 299  VLAGPSILAAFREELLPMADIVTPNLKEASALLGGLQLETVSDMCTAAKLIHDMGPRNVL 358

Query: 673  VKGGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAV 852
            VKGGDLP+ LDAVDIFFDGD  +ELR+SRI+T NTHGTGCTLASCIAAELAKGS +L AV
Sbjct: 359  VKGGDLPSSLDAVDIFFDGDDFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSQILSAV 418

Query: 853  QVAKRFVETALDYSKDIAIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSG 1032
            + AK ++ETALDYSKDIAIG+G QGPFDHL KLK +  NS R++ FNP +L LYA+TDSG
Sbjct: 419  KAAKHYIETALDYSKDIAIGNGFQGPFDHLLKLKSNIRNSFRKQAFNPANLFLYAVTDSG 478

Query: 1033 MNKKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRV 1212
            MNKKW RSI +AVKA+IEGGATI+QLREKDAETR+F+  A+AC+EICHSHGV LLINDR+
Sbjct: 479  MNKKWGRSITEAVKAAIEGGATIVQLREKDAETRDFLEAAKACVEICHSHGVPLLINDRI 538

Query: 1213 DIALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVF 1392
            D+ALACDADGVH+GQSD+P RV RTLLGP KIIGVSCKTPEQA +AW DGADYIGCGGV+
Sbjct: 539  DVALACDADGVHVGQSDIPARVVRTLLGPEKIIGVSCKTPEQAEKAWIDGADYIGCGGVY 598

Query: 1393 PTSTKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFD 1572
            PT+TK NN+TVGL GLKTVC ASK+PVVAIGGI  +NA +VMEIG PNL GVAVVSALFD
Sbjct: 599  PTNTKANNITVGLDGLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVVSALFD 658

Query: 1573 RESVSSETRKLHSVLMDVLSVAK 1641
            RE V +ET+KLH  L    ++ K
Sbjct: 659  RECVLTETQKLHGDLTQAAAMVK 681



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 89/119 (74%), Positives = 98/119 (82%)
 Frame = +2

Query: 77  KVAHVLSVAXXXXXXXXXXXXXXKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVY 256
           K+ HVL+VA              KACA+ GVYCSTVITAVTAQNT+GVQGV+ VPEDFV 
Sbjct: 186 KIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTVGVQGVNIVPEDFVA 245

Query: 257 EQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPS 433
           EQLKSVLSDMHVDVVKTGMLP+IG+VK+L HSLKEFPVQALVVDPVMVSTSG +LA PS
Sbjct: 246 EQLKSVLSDMHVDVVKTGMLPTIGIVKVLHHSLKEFPVQALVVDPVMVSTSGDVLAGPS 304


>emb|CBI29762.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  590 bits (1522), Expect(2) = 0.0
 Identities = 292/383 (76%), Positives = 334/383 (87%)
 Frame = +1

Query: 493  ILADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVL 672
            +LA PSIL AFREELLPMADIVTPNLKEASALLGG++L TV+DMC+AAK IHD+GPR VL
Sbjct: 115  VLAGPSILAAFREELLPMADIVTPNLKEASALLGGLQLETVSDMCTAAKLIHDMGPRNVL 174

Query: 673  VKGGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAV 852
            VKGGDLP+ LDAVDIFFDGD  +ELR+SRI+T NTHGTGCTLASCIAAELAKGS +L AV
Sbjct: 175  VKGGDLPSSLDAVDIFFDGDDFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSQILSAV 234

Query: 853  QVAKRFVETALDYSKDIAIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSG 1032
            + AK ++ETALDYSKDIAIG+G QGPFDHL KLK +  NS R++ FNP +L LYA+TDSG
Sbjct: 235  KAAKHYIETALDYSKDIAIGNGFQGPFDHLLKLKSNIRNSFRKQAFNPANLFLYAVTDSG 294

Query: 1033 MNKKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRV 1212
            MNKKW RSI +AVKA+IEGGATI+QLREKDAETR+F+  A+AC+EICHSHGV LLINDR+
Sbjct: 295  MNKKWGRSITEAVKAAIEGGATIVQLREKDAETRDFLEAAKACVEICHSHGVPLLINDRI 354

Query: 1213 DIALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVF 1392
            D+ALACDADGVH+GQSD+P RV RTLLGP KIIGVSCKTPEQA +AW DGADYIGCGGV+
Sbjct: 355  DVALACDADGVHVGQSDIPARVVRTLLGPEKIIGVSCKTPEQAEKAWIDGADYIGCGGVY 414

Query: 1393 PTSTKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFD 1572
            PT+TK NN+TVGL GLKTVC ASK+PVVAIGGI  +NA +VMEIG PNL GVAVVSALFD
Sbjct: 415  PTNTKANNITVGLDGLKTVCLASKLPVVAIGGINASNARTVMEIGVPNLKGVAVVSALFD 474

Query: 1573 RESVSSETRKLHSVLMDVLSVAK 1641
            RE V +ET+KLH  L    ++ K
Sbjct: 475  RECVLTETQKLHGDLTQAAAMVK 497



 Score =  170 bits (431), Expect(2) = 0.0
 Identities = 89/119 (74%), Positives = 98/119 (82%)
 Frame = +2

Query: 77  KVAHVLSVAXXXXXXXXXXXXXXKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVY 256
           K+ HVL+VA              KACA+ GVYCSTVITAVTAQNT+GVQGV+ VPEDFV 
Sbjct: 2   KIPHVLTVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTVGVQGVNIVPEDFVA 61

Query: 257 EQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPS 433
           EQLKSVLSDMHVDVVKTGMLP+IG+VK+L HSLKEFPVQALVVDPVMVSTSG +LA PS
Sbjct: 62  EQLKSVLSDMHVDVVKTGMLPTIGIVKVLHHSLKEFPVQALVVDPVMVSTSGDVLAGPS 120


>gb|ABK95478.1| unknown [Populus trichocarpa]
          Length = 531

 Score =  557 bits (1435), Expect(2) = 0.0
 Identities = 276/380 (72%), Positives = 328/380 (86%)
 Frame = +1

Query: 493  ILADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVL 672
            +LA PSIL  FREELLP+A+IVTPN+KEASALLGG++L TVADM +AA+ +H LGPR VL
Sbjct: 146  VLAGPSILSTFREELLPIANIVTPNIKEASALLGGIRLETVADMRNAAELLHALGPRNVL 205

Query: 673  VKGGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAV 852
            VKGGDLP  LDAVDIFF+G+H +ELR+SRI+T NTHGTGCTLASCIAAELAKGS ML AV
Sbjct: 206  VKGGDLPDSLDAVDIFFNGEHFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLTAV 265

Query: 853  QVAKRFVETALDYSKDIAIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSG 1032
            +VAKR+VETAL+YSKDI IG+G QGPFDHL +LK  +++  R+  FNP+DL LYA+TDSG
Sbjct: 266  RVAKRYVETALEYSKDILIGNGIQGPFDHLLRLKSGSHSFRRKDAFNPSDLFLYAVTDSG 325

Query: 1033 MNKKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRV 1212
            MNKKW RS++DAV A+I+GGATI+QLR+KDA T++F+  A++CL +C SHGV LLINDRV
Sbjct: 326  MNKKWGRSVVDAVAAAIQGGATIVQLRDKDAGTKDFLETAKSCLAVCRSHGVPLLINDRV 385

Query: 1213 DIALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVF 1392
            D+ALA DADGVH+GQSDMP  VARTLLGP KIIGVSCKT EQA QAW  GADYIGCGGV+
Sbjct: 386  DVALASDADGVHVGQSDMPATVARTLLGPEKIIGVSCKTIEQAQQAWIGGADYIGCGGVY 445

Query: 1393 PTSTKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFD 1572
             T+TK NN T+GL GLKTVCSASK+PVVAIGGI  +NA +VME+G PNL GVAVVSALFD
Sbjct: 446  STNTKANNPTIGLDGLKTVCSASKLPVVAIGGINASNAGTVMEMGVPNLKGVAVVSALFD 505

Query: 1573 RESVSSETRKLHSVLMDVLS 1632
            RE+V +ET+KLH++LM+  S
Sbjct: 506  RENVLAETKKLHALLMEASS 525



 Score =  155 bits (393), Expect(2) = 0.0
 Identities = 82/118 (69%), Positives = 91/118 (77%)
 Frame = +2

Query: 80  VAHVLSVAXXXXXXXXXXXXXXKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVYE 259
           + HVLSVA              KACA+ GVYCSTVIT+VTAQNT+GVQ VH VPEDFV +
Sbjct: 34  IPHVLSVAGSDSGAGAGIQADLKACAARGVYCSTVITSVTAQNTVGVQAVHAVPEDFVAQ 93

Query: 260 QLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPS 433
           QLKSVLSDM VDVVKTGMLPS+GVVK+L  SL E  V+ALVVDPVMVSTSG +LA PS
Sbjct: 94  QLKSVLSDMQVDVVKTGMLPSVGVVKVLLQSLTELSVRALVVDPVMVSTSGDVLAGPS 151


>ref|XP_002530677.1| phosphomethylpyrimidine kinase, putative [Ricinus communis]
            gi|223529770|gb|EEF31708.1| phosphomethylpyrimidine
            kinase, putative [Ricinus communis]
          Length = 546

 Score =  550 bits (1418), Expect(2) = 0.0
 Identities = 276/380 (72%), Positives = 314/380 (82%)
 Frame = +1

Query: 493  ILADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVL 672
            +LA PSI+  FREELLPMA+IVTPN+KEASALLGGM L T+ADM SAAK +H LGP+ VL
Sbjct: 160  VLAGPSIVSCFREELLPMANIVTPNIKEASALLGGMPLETLADMRSAAKLLHALGPQNVL 219

Query: 673  VKGGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAV 852
            VKGGDLP  LDAVDIFFDG+  HELR+SRI+T NTHGTGCTLASCIAAELAKGS ML AV
Sbjct: 220  VKGGDLPDSLDAVDIFFDGEDYHELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLSAV 279

Query: 853  QVAKRFVETALDYSKDIAIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSG 1032
            +VAK ++ETAL+YSKDI IG+G QGPFDHL +LK S  NS R+  FNPN+L LYA+ DS 
Sbjct: 280  KVAKCYIETALEYSKDIFIGNGRQGPFDHLLRLKSSVQNSGRQGTFNPNNLFLYAVPDSR 339

Query: 1033 MNKKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRV 1212
            MNK W R ++DA + +IEGGATI+QLREK+ ETR+F+  A+ACLEIC SHGV LLINDRV
Sbjct: 340  MNKMWGRPMVDATREAIEGGATIVQLREKNTETRDFINTAKACLEICRSHGVPLLINDRV 399

Query: 1213 DIALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVF 1392
            D+ALACDADGVH+GQSD+P R AR LLGP KIIGVSCKTPEQA QAW DGADYIGCGGV+
Sbjct: 400  DVALACDADGVHVGQSDIPARTARILLGPDKIIGVSCKTPEQAQQAWIDGADYIGCGGVY 459

Query: 1393 PTSTKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFD 1572
            PT+TK NN TVG  GLK VC ASK+PVVAIGGI   NA SVME G  NL GVAVVSALFD
Sbjct: 460  PTTTKANNSTVGFDGLKAVCLASKLPVVAIGGINATNAVSVMESGVANLKGVAVVSALFD 519

Query: 1573 RESVSSETRKLHSVLMDVLS 1632
            +ESV   TR LH++L +  S
Sbjct: 520  KESVLDATRNLHAILTEAAS 539



 Score =  160 bits (406), Expect(2) = 0.0
 Identities = 87/124 (70%), Positives = 95/124 (76%)
 Frame = +2

Query: 62  AMANHKVAHVLSVAXXXXXXXXXXXXXXKACASLGVYCSTVITAVTAQNTLGVQGVHGVP 241
           A AN K+ HVLSVA              KACA+ GVYCSTVITAVTAQNT GVQGV  V 
Sbjct: 42  AAANKKIPHVLSVAGSDSGAGAGIQADLKACAARGVYCSTVITAVTAQNTAGVQGVDIVR 101

Query: 242 EDFVYEQLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHIL 421
            DFV EQLKSVLSDM VDVVKTGMLPSIG+VK+L  +L+EFPV+ALVVDPVMVSTSG +L
Sbjct: 102 NDFVAEQLKSVLSDMQVDVVKTGMLPSIGIVKILHQNLREFPVRALVVDPVMVSTSGDVL 161

Query: 422 ADPS 433
           A PS
Sbjct: 162 AGPS 165


>ref|XP_002304056.1| predicted protein [Populus trichocarpa] gi|222841488|gb|EEE79035.1|
            predicted protein [Populus trichocarpa]
          Length = 507

 Score =  553 bits (1424), Expect(2) = 0.0
 Identities = 276/380 (72%), Positives = 326/380 (85%)
 Frame = +1

Query: 493  ILADPSILMAFREELLPMADIVTPNLKEASALLGGMKLVTVADMCSAAKSIHDLGPRYVL 672
            +LA PSIL  FREELLPMA+IVTPN+KEASALLGG++L TVADM +AA+ +H LGPR VL
Sbjct: 122  VLAGPSILSTFREELLPMANIVTPNIKEASALLGGIRLETVADMRNAAELLHALGPRNVL 181

Query: 673  VKGGDLPAPLDAVDIFFDGDHCHELRASRIQTHNTHGTGCTLASCIAAELAKGSLMLPAV 852
            VKGGDLP  LDAVDIFF+G+H +ELR+SRI+T NTHGTGCTLASCIAAELAKGS ML AV
Sbjct: 182  VKGGDLPDSLDAVDIFFNGEHFYELRSSRIKTRNTHGTGCTLASCIAAELAKGSPMLTAV 241

Query: 853  QVAKRFVETALDYSKDIAIGSGPQGPFDHLFKLKRSTYNSSRRRGFNPNDLLLYAITDSG 1032
            +VAKR+VETAL+YSKDI IG+G QGPFDHL +LK  +++  R+  FNP+DL LYA+TDSG
Sbjct: 242  RVAKRYVETALEYSKDILIGNGIQGPFDHLLRLKSGSHSFHRKDAFNPSDLFLYAVTDSG 301

Query: 1033 MNKKWARSIIDAVKASIEGGATIIQLREKDAETREFVRLAEACLEICHSHGVALLINDRV 1212
            MNKKW RS +DAV A+I+GGATI+QLR+KDA T++F+  A++CL +C SHGV LLIND V
Sbjct: 302  MNKKWGRSTVDAVAAAIQGGATIVQLRDKDAGTKDFLETAKSCLAVCRSHGVPLLINDCV 361

Query: 1213 DIALACDADGVHLGQSDMPPRVARTLLGPGKIIGVSCKTPEQALQAWADGADYIGCGGVF 1392
            D+ALA DADGVH+GQSDMP  VARTLLGP KIIGVSCKT EQA QAW  GADYIGCGGV+
Sbjct: 362  DVALASDADGVHVGQSDMPATVARTLLGPEKIIGVSCKTIEQAQQAWIGGADYIGCGGVY 421

Query: 1393 PTSTKENNLTVGLSGLKTVCSASKVPVVAIGGIGLANAHSVMEIGEPNLHGVAVVSALFD 1572
             T+TK NN T+GL GLKTVCSASK+PVVAIGGI  +NA +VME+G PNL GVAVVSALFD
Sbjct: 422  STNTKANNPTIGLDGLKTVCSASKLPVVAIGGINDSNAGTVMEMGVPNLKGVAVVSALFD 481

Query: 1573 RESVSSETRKLHSVLMDVLS 1632
            RE+V +ET+KLH++LM+  S
Sbjct: 482  RENVLAETKKLHALLMEASS 501



 Score =  155 bits (391), Expect(2) = 0.0
 Identities = 82/118 (69%), Positives = 91/118 (77%)
 Frame = +2

Query: 80  VAHVLSVAXXXXXXXXXXXXXXKACASLGVYCSTVITAVTAQNTLGVQGVHGVPEDFVYE 259
           V HVLSVA              KAC++ GVYCSTVIT+VTAQNT+GVQ VH VPEDFV +
Sbjct: 10  VPHVLSVAGSDSGAGAGIQADLKACSARGVYCSTVITSVTAQNTVGVQAVHAVPEDFVAQ 69

Query: 260 QLKSVLSDMHVDVVKTGMLPSIGVVKLLCHSLKEFPVQALVVDPVMVSTSGHILADPS 433
           QLKSVLSDM VDVVKTGMLPS+GVVK+L  SL E  V+ALVVDPVMVSTSG +LA PS
Sbjct: 70  QLKSVLSDMQVDVVKTGMLPSVGVVKVLLQSLTELSVRALVVDPVMVSTSGDVLAGPS 127


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