BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008471
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514929.1| GTP binding protein, putative [Ricinus commu...   587   e-165
ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPa...   586   e-165
ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPa...   580   e-163
ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPa...   566   e-159
ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPa...   563   e-158

>ref|XP_002514929.1| GTP binding protein, putative [Ricinus communis]
            gi|223545980|gb|EEF47483.1| GTP binding protein, putative
            [Ricinus communis]
          Length = 500

 Score =  587 bits (1514), Expect = e-165
 Identities = 289/378 (76%), Positives = 332/378 (87%), Gaps = 10/378 (2%)
 Frame = +1

Query: 292  NQAIGMVSSAQANYMRVVVEKAAPTENT-------SSSIVGVELLCVVRAVLKKIKRRVL 450
            +QA+G V++AQAN+MRV+++   P+  T         S +GVELLCVVRAVLKKI+RRVL
Sbjct: 92   SQAVGTVAAAQANFMRVIIQSLPPSSGTFLKSPEEEDSRIGVELLCVVRAVLKKIRRRVL 151

Query: 451  VGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFL 630
            VGDKV+V SIDWVD+RGMIENVF+RS+EILDPPVANVDHLLVLFS +QPK+E F+LTRFL
Sbjct: 152  VGDKVVVGSIDWVDRRGMIENVFQRSTEILDPPVANVDHLLVLFSMDQPKIEPFALTRFL 211

Query: 631  VEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQ 810
            VEAESTGIP+TLALNKSELVDEET +AWK++LR WGY+PLFCSVES +GLDSLA+ILREQ
Sbjct: 212  VEAESTGIPLTLALNKSELVDEETLIAWKSRLRSWGYEPLFCSVESKLGLDSLAYILREQ 271

Query: 811  TSVIVGPSGVGKSSLINALRGSKHG---PEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGK 981
            T+VIVGPSGVGKSSLINALR         E DNW   + GSKWFE+QRVGEVS RSGRGK
Sbjct: 272  TTVIVGPSGVGKSSLINALRNKPRACDVAENDNWFDPMLGSKWFEEQRVGEVSTRSGRGK 331

Query: 982  HTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTNDPAKCSFSDC 1161
            HTTR+VSLLPLS GG+LADTPGFNQPSL++VTK+SLA+ FPEI+KMLS+  PAKCSF+DC
Sbjct: 332  HTTRNVSLLPLSAGGYLADTPGFNQPSLLKVTKQSLAETFPEIQKMLSSGGPAKCSFNDC 391

Query: 1162 LHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEP 1341
            LHLGEPGC+V GDWERY++Y QLLDEI+IREEFQLRT GTK+E DVRYKVGDMGV+QAEP
Sbjct: 392  LHLGEPGCIVNGDWERYSFYFQLLDEIRIREEFQLRTYGTKKEGDVRYKVGDMGVQQAEP 451

Query: 1342 RLELKKHRRQSRKRINQS 1395
            RLE KKHRRQSRKRINQS
Sbjct: 452  RLEPKKHRRQSRKRINQS 469


>ref|XP_004144195.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus] gi|449489232|ref|XP_004158254.1| PREDICTED:
            putative ribosome biogenesis GTPase RsgA-like [Cucumis
            sativus]
          Length = 504

 Score =  586 bits (1511), Expect = e-165
 Identities = 294/388 (75%), Positives = 334/388 (86%), Gaps = 20/388 (5%)
 Frame = +1

Query: 292  NQAIGMVSSAQANYMRVVV---------------EKAAPTENTSS--SIVGVELLCVVRA 420
            +QAIG V++AQAN+MRV+V               E++   E+ SS  S++GVELLCVV+A
Sbjct: 88   SQAIGTVAAAQANFMRVIVQTLPSQFSQSPNDDLERSGSLEDDSSKSSMLGVELLCVVKA 147

Query: 421  VLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPK 600
            VLKKIKRRVLVGDKV+V SIDWVD+RGMIENVF+RSSEILDPPVANVDHLLVLFS +QP+
Sbjct: 148  VLKKIKRRVLVGDKVVVGSIDWVDRRGMIENVFQRSSEILDPPVANVDHLLVLFSMDQPR 207

Query: 601  VESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGL 780
            +E F+LTRFLVEAESTGIP+TL LNK ELVDEET V+WK++LR WGY PLFCSV++G GL
Sbjct: 208  LEPFTLTRFLVEAESTGIPLTLGLNKLELVDEETLVSWKSRLRSWGYDPLFCSVQTGAGL 267

Query: 781  DSLAFILREQTSVIVGPSGVGKSSLINALRGSKHGPEE---DNWLSHIEGSKWFEDQRVG 951
            DSLAFILR+QT+VIVGPSGVGKSSLINALR S    +    DNW   I GSKWFE+QRV 
Sbjct: 268  DSLAFILRDQTTVIVGPSGVGKSSLINALRNSNRATDASDTDNWFDPILGSKWFEEQRVA 327

Query: 952  EVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTN 1131
            EVS RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSLM++TK+SLAQ FPEI+KML  +
Sbjct: 328  EVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKITKQSLAQAFPEIQKMLHAS 387

Query: 1132 DPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKV 1311
            +PAKCSF+DCLHLGEPGCV+KGDWERY YY QLLDEI+IREEFQLRT GTKRE DVR KV
Sbjct: 388  EPAKCSFNDCLHLGEPGCVIKGDWERYQYYFQLLDEIRIREEFQLRTFGTKREGDVRIKV 447

Query: 1312 GDMGVKQAEPRLELKKHRRQSRKRINQS 1395
            G+MGVKQAEPRLELKKHRRQSRKR+NQS
Sbjct: 448  GEMGVKQAEPRLELKKHRRQSRKRVNQS 475


>ref|XP_002279434.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like isoform 3
            [Vitis vinifera]
          Length = 491

 Score =  580 bits (1494), Expect = e-163
 Identities = 311/461 (67%), Positives = 348/461 (75%), Gaps = 19/461 (4%)
 Frame = +1

Query: 70   MSISLTSIFRYRLSLSLPILHLKKTSS---TIITSARQDPNPYRKLQXXXXXXXXXXXXX 240
            M I+ TSIFRY    SL +L     +S       +  Q+P   +                
Sbjct: 1    MPIASTSIFRYSNPSSLLLLRRGAAASFRHLSFVAKHQNPISRKPQNKNLLRAKQTVKHL 60

Query: 241  XXXXXXXXXXXXXXXXXNQAIGMVSSAQANYMRVVVEKAAPTENTSSSI---------VG 393
                              +A+GMV++AQAN+MRV+VE +   +               VG
Sbjct: 61   SSLSPTLPVNHRPLLSATEAVGMVAAAQANFMRVIVEDSRVEDGDGGGDGDGDGDAVRVG 120

Query: 394  VELLCVVRAVLKKIKRRVLVGDKVLVSSIDWVDKRGMIENVFERSSEILDPPVANVDHLL 573
            VELLCVVRAVLKKIKRRVLVGDKVLV SIDWVD+RG+IENVF R SEILDPPVANVDHLL
Sbjct: 121  VELLCVVRAVLKKIKRRVLVGDKVLVGSIDWVDRRGVIENVFSRKSEILDPPVANVDHLL 180

Query: 574  VLFSFEQPKVESFSLTRFLVEAESTGIPVTLALNKSELVDEETQVAWKAKLRKWGYQPLF 753
            VLF+ EQPK+E +SLTRFLVEAESTGIP+TLALNKSELVDEET+VAWK++LR WGY P+F
Sbjct: 181  VLFAMEQPKLEVYSLTRFLVEAESTGIPITLALNKSELVDEETRVAWKSRLRSWGYGPVF 240

Query: 754  CSVESGVGLDSLAFILREQTSVIVGPSGVGKSSLINALRGSKH-----GPEEDNWLSHIE 918
            CSVES  GLD+LAF LREQT+VIVGPSGVGKSSLINALR S H       EE+NW   I 
Sbjct: 241  CSVESKFGLDTLAFSLREQTTVIVGPSGVGKSSLINALR-SNHPLINVSSEENNWFDSIL 299

Query: 919  GSKWFEDQRVGEVSIRSGRGKHTTRHVSLLPLSGGGFLADTPGFNQPSLMRVTKKSLAQM 1098
            GSK  E+QRVGEVS+RSGRGKHTTRHVSLLPLSGGG+LADTPGFNQPSL++VT +SLAQ 
Sbjct: 300  GSKLLEEQRVGEVSVRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTTQSLAQT 359

Query: 1099 FPEIRKML--STNDPAKCSFSDCLHLGEPGCVVKGDWERYAYYLQLLDEIKIREEFQLRT 1272
            FPEIRK+L  S N+P KCSF+DCLHLGEPGCVVKGDWERY YY QLLDEIKIREEFQLRT
Sbjct: 360  FPEIRKLLSGSANEPEKCSFNDCLHLGEPGCVVKGDWERYPYYFQLLDEIKIREEFQLRT 419

Query: 1273 LGTKRESDVRYKVGDMGVKQAEPRLELKKHRRQSRKRINQS 1395
            LGTKRE DVRYK GDMGVKQAEPRLE KKHRRQSRKR+NQS
Sbjct: 420  LGTKREGDVRYKTGDMGVKQAEPRLEPKKHRRQSRKRMNQS 460


>ref|XP_003551427.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 473

 Score =  566 bits (1458), Expect = e-159
 Identities = 283/369 (76%), Positives = 322/369 (87%), Gaps = 1/369 (0%)
 Frame = +1

Query: 292  NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 471
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 79   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 135

Query: 472  SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 651
             SIDWVD+RGMIENVF R+SEILDPPVANVD LLVLFS EQPK E F+LTRFLVEAESTG
Sbjct: 136  GSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLVLFSLEQPKPEPFTLTRFLVEAESTG 195

Query: 652  IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 831
            IP+TLALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L F LR+QT+VIVGP
Sbjct: 196  IPLTLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGFKLRDQTTVIVGP 255

Query: 832  SGVGKSSLINALRGS-KHGPEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGKHTTRHVSLL 1008
            SGVGKSSLINALR +  +  E +NW   + GSKW EDQRVGEVS RSGRGKHTTRHVSLL
Sbjct: 256  SGVGKSSLINALRSNPSNAAEGENWFEPVLGSKWLEDQRVGEVSTRSGRGKHTTRHVSLL 315

Query: 1009 PLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTNDPAKCSFSDCLHLGEPGCV 1188
            PLS GGFLADTPGFNQPSL++VTK+SLAQ FPEIRKMLS ++  KCSF++CLHLGEPGC+
Sbjct: 316  PLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSASEIEKCSFNNCLHLGEPGCI 375

Query: 1189 VKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRR 1368
            VKGDWERY+YY QLLDEI+IREEFQLRT GTKRE DVR K+GDMGV+QAEPRLE KKHRR
Sbjct: 376  VKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRR 435

Query: 1369 QSRKRINQS 1395
            QSRKRINQS
Sbjct: 436  QSRKRINQS 444


>ref|XP_003538555.1| PREDICTED: putative ribosome biogenesis GTPase RsgA-like [Glycine
            max]
          Length = 475

 Score =  563 bits (1450), Expect = e-158
 Identities = 282/369 (76%), Positives = 319/369 (86%), Gaps = 1/369 (0%)
 Frame = +1

Query: 292  NQAIGMVSSAQANYMRVVVEKAAPTENTSSSIVGVELLCVVRAVLKKIKRRVLVGDKVLV 471
            +QAIG+V+++QAN+MRV+V +    +  S S  GVE+LCVVRA+LKKIKRRV+VGDKVLV
Sbjct: 83   SQAIGVVAASQANFMRVIVPE---NDEPSGSFRGVEILCVVRALLKKIKRRVMVGDKVLV 139

Query: 472  SSIDWVDKRGMIENVFERSSEILDPPVANVDHLLVLFSFEQPKVESFSLTRFLVEAESTG 651
             SIDWVD+RGMIENVF+R+SEILDPPVANVD LLVLFS E PK E F+LTRFLVEAESTG
Sbjct: 140  GSIDWVDRRGMIENVFQRTSEILDPPVANVDQLLVLFSLEHPKPEPFTLTRFLVEAESTG 199

Query: 652  IPVTLALNKSELVDEETQVAWKAKLRKWGYQPLFCSVESGVGLDSLAFILREQTSVIVGP 831
            IP+ LALNK+ELVD E   +WKA+LR WGY+P+FCSVESG GLD L + LR+QT+VIVGP
Sbjct: 200  IPLMLALNKTELVDNEIISSWKARLRSWGYEPVFCSVESGHGLDLLGYKLRDQTTVIVGP 259

Query: 832  SGVGKSSLINALRGS-KHGPEEDNWLSHIEGSKWFEDQRVGEVSIRSGRGKHTTRHVSLL 1008
            SGVGKSSLINALR +     E DNW   I GSKW EDQRVGEVS RSGRGKHTTRHVSLL
Sbjct: 260  SGVGKSSLINALRSNPSDAAEGDNWFEPILGSKWLEDQRVGEVSTRSGRGKHTTRHVSLL 319

Query: 1009 PLSGGGFLADTPGFNQPSLMRVTKKSLAQMFPEIRKMLSTNDPAKCSFSDCLHLGEPGCV 1188
            PLS GGFLADTPGFNQPSL++VTK+SLAQ FPEIRKMLS N+  KCSF++CLHLGEPGC+
Sbjct: 320  PLSEGGFLADTPGFNQPSLLKVTKQSLAQTFPEIRKMLSANETEKCSFNNCLHLGEPGCI 379

Query: 1189 VKGDWERYAYYLQLLDEIKIREEFQLRTLGTKRESDVRYKVGDMGVKQAEPRLELKKHRR 1368
            VKGDWERY+YY QLLDEI+IREEFQLRT GTKRE DVR K+GDMGV+QAEPRLE KKHRR
Sbjct: 380  VKGDWERYSYYFQLLDEIRIREEFQLRTFGTKREGDVRLKMGDMGVQQAEPRLEPKKHRR 439

Query: 1369 QSRKRINQS 1395
            QSRK INQS
Sbjct: 440  QSRKSINQS 448