BLASTX nr result

ID: Coptis24_contig00008469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008469
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB...   429   e-118
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              423   e-116
ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB...   423   e-116
ref|XP_003612528.1| Alkylated DNA repair protein alkB-like prote...   413   e-113
ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB...   411   e-112

>ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Cucumis sativus] gi|449523025|ref|XP_004168525.1|
           PREDICTED: alkylated DNA repair protein alkB homolog
           8-like [Cucumis sativus]
          Length = 344

 Score =  429 bits (1103), Expect = e-118
 Identities = 210/321 (65%), Positives = 245/321 (76%), Gaps = 7/321 (2%)
 Frame = -2

Query: 953 IYVANCGPAVGISLEEIASAFSEFGEVKSVEAADETGARVIVSFCQDSSARAAIQSFHGL 774
           +YVANCGPAVGIS   IA+ F+ FG VK V  AD+TGARVIV F ++SSARAA+++ HG 
Sbjct: 23  LYVANCGPAVGISHPAIAAVFAHFGHVKGVHPADDTGARVIVCFSEESSARAALEALHGR 82

Query: 773 PCPLLNNRLLHIRYSFLKPKPXXXXXXXXXSLEASELQIPGLYLLRDFITTEQEQELLAQ 594
           PCPLL  R LHIRYS  +P           SL ASEL IPGL+LL DF+  ++E++LL +
Sbjct: 83  PCPLLGGRTLHIRYSITRPSISQPNDSLSVSLSASELDIPGLFLLHDFVNAKEEEDLLRE 142

Query: 593 VDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPN---ITDN 423
           VDARPW NLAKRRVQHYGYEF YQTRNVNTKH LG+LPSF+S +++ IS FPN   I D 
Sbjct: 143 VDARPWNNLAKRRVQHYGYEFCYQTRNVNTKHQLGELPSFVSHVVDRISMFPNTEDIADA 202

Query: 422 LLDQLTVNEYPPGVGLSPHIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPSSSPDK 243
            LDQLTVNEYPPGVGLSPHIDTHSAF+G IFSLSLAGPC+MEFR+Y +G+W    SS D 
Sbjct: 203 SLDQLTVNEYPPGVGLSPHIDTHSAFEGLIFSLSLAGPCIMEFRRYPEGTWHKFPSSIDL 262

Query: 242 IGEN----PQVFKKALFLPPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSSRRVSF 75
             EN        +KA++LPPRSMLLLSGEARY WHHYIPHHK+D V+ + I+R  RRVSF
Sbjct: 263 KMENSVNDSNYLRKAIYLPPRSMLLLSGEARYVWHHYIPHHKIDMVKDSSIRRGRRRVSF 322

Query: 74  TLRKVRNGPCCCEFPQYCDSQ 12
           T RKVR  PC C+FP YCDSQ
Sbjct: 323 TFRKVRTDPCQCKFPHYCDSQ 343


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  423 bits (1087), Expect = e-116
 Identities = 206/325 (63%), Positives = 254/325 (78%), Gaps = 7/325 (2%)
 Frame = -2

Query: 968  EENEDIYVANCGPAVGISLEEIASAFSEFGEVKSVEAADETGARVIVSFCQDSSARAAIQ 789
            E + ++YVANCGPAVG+S + IAS FS FGEVK V  AD++GARVIVS+ ++S+A+AA++
Sbjct: 587  ELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVIVSYFEESAAQAALK 646

Query: 788  SFHGLPCPLLNNRLLHIRYSFLKPKPXXXXXXXXXSLEASELQIPGLYLLRDFITTEQEQ 609
            +  G PCP L  R LHIRYS  +P P         SL  SEL IPG+YLL DF++ ++E+
Sbjct: 647  ALDGHPCPALGGRFLHIRYSIFQP-PSQVNDSVPVSLVDSELNIPGIYLLHDFVSAKEEE 705

Query: 608  ELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPNI- 432
            ELLA VD   W++L+KRRVQHYGYEF Y+TRNVNTK +LG+LPSF+S I+E ISSFPN+ 
Sbjct: 706  ELLAAVDKMSWKSLSKRRVQHYGYEFCYETRNVNTKQYLGKLPSFVSAIVERISSFPNLE 765

Query: 431  --TDNLLDQLTVNEYPPGVGLSPHIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPS 258
               D +LDQLTVNEYPPGVGLSPHIDTHSAF+G IFSLSLAGPC+M+FR+Y++G W   +
Sbjct: 766  SAADIVLDQLTVNEYPPGVGLSPHIDTHSAFEGFIFSLSLAGPCIMDFRRYTEGVWPKSA 825

Query: 257  SSPDKIGENPQ----VFKKALFLPPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSS 90
            SS D   E P       ++A++LPPRSMLLLSGEARYAWHHYIPHHK+D V+ ++I+R  
Sbjct: 826  SSSDMSVEYPDKSSSFLRRAIYLPPRSMLLLSGEARYAWHHYIPHHKIDMVKDSVIRRGP 885

Query: 89   RRVSFTLRKVRNGPCCCEFPQYCDS 15
            RRVSFT RKVR GPC CEFPQYCDS
Sbjct: 886  RRVSFTFRKVRTGPCQCEFPQYCDS 910


>ref|XP_002270503.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like [Vitis
           vinifera]
          Length = 349

 Score =  423 bits (1087), Expect = e-116
 Identities = 206/325 (63%), Positives = 254/325 (78%), Gaps = 7/325 (2%)
 Frame = -2

Query: 968 EENEDIYVANCGPAVGISLEEIASAFSEFGEVKSVEAADETGARVIVSFCQDSSARAAIQ 789
           E + ++YVANCGPAVG+S + IAS FS FGEVK V  AD++GARVIVS+ ++S+A+AA++
Sbjct: 24  ELSPNLYVANCGPAVGLSFDTIASVFSTFGEVKGVYPADDSGARVIVSYFEESAAQAALK 83

Query: 788 SFHGLPCPLLNNRLLHIRYSFLKPKPXXXXXXXXXSLEASELQIPGLYLLRDFITTEQEQ 609
           +  G PCP L  R LHIRYS  +P P         SL  SEL IPG+YLL DF++ ++E+
Sbjct: 84  ALDGHPCPALGGRFLHIRYSIFQP-PSQVNDSVPVSLVDSELNIPGIYLLHDFVSAKEEE 142

Query: 608 ELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPNI- 432
           ELLA VD   W++L+KRRVQHYGYEF Y+TRNVNTK +LG+LPSF+S I+E ISSFPN+ 
Sbjct: 143 ELLAAVDKMSWKSLSKRRVQHYGYEFCYETRNVNTKQYLGKLPSFVSAIVERISSFPNLE 202

Query: 431 --TDNLLDQLTVNEYPPGVGLSPHIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLPPS 258
              D +LDQLTVNEYPPGVGLSPHIDTHSAF+G IFSLSLAGPC+M+FR+Y++G W   +
Sbjct: 203 SAADIVLDQLTVNEYPPGVGLSPHIDTHSAFEGFIFSLSLAGPCIMDFRRYTEGVWPKSA 262

Query: 257 SSPDKIGENPQ----VFKKALFLPPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIKRSS 90
           SS D   E P       ++A++LPPRSMLLLSGEARYAWHHYIPHHK+D V+ ++I+R  
Sbjct: 263 SSSDMSVEYPDKSSSFLRRAIYLPPRSMLLLSGEARYAWHHYIPHHKIDMVKDSVIRRGP 322

Query: 89  RRVSFTLRKVRNGPCCCEFPQYCDS 15
           RRVSFT RKVR GPC CEFPQYCDS
Sbjct: 323 RRVSFTFRKVRTGPCQCEFPQYCDS 347


>ref|XP_003612528.1| Alkylated DNA repair protein alkB-like protein [Medicago truncatula]
            gi|355513863|gb|AES95486.1| Alkylated DNA repair protein
            alkB-like protein [Medicago truncatula]
          Length = 344

 Score =  413 bits (1061), Expect = e-113
 Identities = 209/331 (63%), Positives = 248/331 (74%), Gaps = 11/331 (3%)
 Frame = -2

Query: 971  EEENEDIYVANCGPAVGISLEEIASAFSEFGEVKSVEAADETGARVIVSFCQDSSARAAI 792
            +E + +++VANCGPAVGIS +EIAS FS+FGE+  V AAD++G RVIVSF    SA++A 
Sbjct: 13   DELSSNLFVANCGPAVGISDDEIASVFSKFGELNGVYAADDSGTRVIVSFSDVGSAQSAF 72

Query: 791  QSFHGLPCPLLNNRLLHIRYSFLKPKPXXXXXXXXXS-LEASELQIPGLYLLRDFITTEQ 615
             + HG PCP L  R L IRYS L+P P           + AS+L IPGLYLL DF++  +
Sbjct: 73   MALHGKPCPELGGRSLFIRYSVLQPNPQDQVKDLVPVSMTASDLNIPGLYLLHDFVSATE 132

Query: 614  EQELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHLGQLPSFLSPILENISSFPN 435
            E+ELL  VD+RPW +LAKRRVQHYGYEF Y  RNVNTK  LG+LPSFLSPILE ISS P 
Sbjct: 133  EEELLQSVDSRPWNSLAKRRVQHYGYEFCYDIRNVNTKRCLGELPSFLSPILERISSCPT 192

Query: 434  ITDN-----LLDQLTVNEYPPGVGLSPHIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSW 270
              +      +LDQLTVNEYPPGVGLSPHIDTHSAF+  IFSLSLAGPC+MEFR+Y  G W
Sbjct: 193  FKNADPDRIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLAGPCIMEFRRYGDGDW 252

Query: 269  LPP-SSSPDKIGENPQ----VFKKALFLPPRSMLLLSGEARYAWHHYIPHHKVDAVRGNI 105
             P  +SS D   + P+      K+A++LPPRS+LLLSGEARYAWHHYIPHHK+D V G +
Sbjct: 253  RPRVASSIDTKVDCPEDGSNCIKRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVDGKV 312

Query: 104  IKRSSRRVSFTLRKVRNGPCCCEFPQYCDSQ 12
            I+R+SRRVSFTLRKVR G C CEFPQYCDSQ
Sbjct: 313  IRRASRRVSFTLRKVRAGLCKCEFPQYCDSQ 343


>ref|XP_003534335.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Glycine max]
          Length = 342

 Score =  411 bits (1057), Expect = e-112
 Identities = 202/329 (61%), Positives = 255/329 (77%), Gaps = 10/329 (3%)
 Frame = -2

Query: 968 EENEDIYVANCGPAVGISLEEIASAFSEFGEVKSVEAADETGARVIVSFCQDSSARAAIQ 789
           E + +++VANCG AVG+S ++IAS F +FGE+K V AADE+G RVIV++ ++ SA+AA++
Sbjct: 14  ELSSNLFVANCGSAVGLSDDDIASVFCKFGELKGVYAADESGTRVIVAYVEEGSAQAALK 73

Query: 788 SFHGLPCPLLNNRLLHIRYSFLKPKPXXXXXXXXXS-LEASELQIPGLYLLRDFITTEQE 612
           + HG  CP L  R LHIRYS L+P P           + AS++ IPGL+L+ DFI+ ++E
Sbjct: 74  ALHGQSCPELGGRSLHIRYSVLQPTPQDQASDLVPVSITASDVSIPGLFLVHDFISAKEE 133

Query: 611 QELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHLGQLPSFLSPILENISSFP-- 438
           +ELL  VD RPW +L+KRRVQHYGYEF Y  RNVNT+H LG+LPSF+SPIL+ ISS P  
Sbjct: 134 EELLQAVDCRPWNSLSKRRVQHYGYEFRYDIRNVNTRHCLGELPSFVSPILDRISSCPTF 193

Query: 437 -NITDNLLDQLTVNEYPPGVGLSPHIDTHSAFQGSIFSLSLAGPCVMEFRKYSQGSWLP- 264
            N+ + +LDQLTVNEYPPGVGLSPHIDTHSAF+  IFSLSL+GPC+MEFR+Y  G WLP 
Sbjct: 194 ENVKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRRYENGDWLPR 253

Query: 263 -PSSSPDKIGENPQ----VFKKALFLPPRSMLLLSGEARYAWHHYIPHHKVDAVRGNIIK 99
             SS+  KI ENP+      ++A++LPPRS+LLLSGEARYAWHHYIPHHK+D V G +I+
Sbjct: 254 VASSAVAKI-ENPEDQSNFIRRAIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGKVIR 312

Query: 98  RSSRRVSFTLRKVRNGPCCCEFPQYCDSQ 12
           R+SRRVSFT RKVR G C CEFPQYCDS+
Sbjct: 313 RASRRVSFTFRKVREGLCKCEFPQYCDSR 341


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