BLASTX nr result
ID: Coptis24_contig00008467
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008467
(314 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat... 134 6e-30
emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera] 134 6e-30
ref|XP_002512122.1| pentatricopeptide repeat-containing protein,... 129 2e-28
ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28
ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago ... 127 9e-28
>ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 134 bits (338), Expect = 6e-30
Identities = 60/99 (60%), Positives = 82/99 (82%)
Frame = -1
Query: 299 VDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQA 120
V +A K+F +++EKSL+TWNS+I GF+Q+G + EA+ L DQM+ ++MDK+TFLS +QA
Sbjct: 454 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 513
Query: 119 CSHLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
CSHLGYLEKG+ HHKL++ GL KD Y++TALTDMY+KC
Sbjct: 514 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 552
Score = 74.7 bits (182), Expect = 7e-12
Identities = 38/95 (40%), Positives = 58/95 (61%)
Frame = -1
Query: 287 YKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACSHL 108
+KVF ++EK++++WN++I FT++G EAL L QM Q L D + S++ AC +
Sbjct: 358 HKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 417
Query: 107 GYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
+ + G Q H ++ +G DF V AL DMYAKC
Sbjct: 418 SFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKC 451
Score = 73.9 bits (180), Expect = 1e-11
Identities = 36/98 (36%), Positives = 57/98 (58%)
Frame = -1
Query: 299 VDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQA 120
+D A K F+ + + ++ W+S++ F Q+G A+E L++ QM + +E D VT LS +A
Sbjct: 151 LDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEA 210
Query: 119 CSHLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAK 6
CS LG L GR H +V +E + +N +L MY K
Sbjct: 211 CSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGK 248
Score = 55.8 bits (133), Expect = 3e-06
Identities = 24/87 (27%), Positives = 51/87 (58%)
Frame = -1
Query: 311 KSYSVDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLS 132
K + A+ VF+ + E+S+++W+ +I G+ G ++L +QM ++ + +TF+
Sbjct: 551 KCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMH 610
Query: 131 AVQACSHLGYLEKGRQFHHKLVISGLE 51
+ ACSH G +E+G+ + + + G+E
Sbjct: 611 ILSACSHAGAVEEGKLYFNSMSEFGVE 637
>emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 134 bits (338), Expect = 6e-30
Identities = 60/99 (60%), Positives = 82/99 (82%)
Frame = -1
Query: 299 VDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQA 120
V +A K+F +++EKSL+TWNS+I GF+Q+G + EA+ L DQM+ ++MDK+TFLS +QA
Sbjct: 651 VHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQA 710
Query: 119 CSHLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
CSHLGYLEKG+ HHKL++ GL KD Y++TALTDMY+KC
Sbjct: 711 CSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 749
Score = 74.7 bits (182), Expect = 7e-12
Identities = 38/95 (40%), Positives = 58/95 (61%)
Frame = -1
Query: 287 YKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACSHL 108
+KVF ++EK++++WN++I FT++G EAL L QM Q L D + S++ AC +
Sbjct: 555 HKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTI 614
Query: 107 GYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
+ + G Q H ++ +G DF V AL DMYAKC
Sbjct: 615 SFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKC 648
Score = 55.8 bits (133), Expect = 3e-06
Identities = 24/87 (27%), Positives = 51/87 (58%)
Frame = -1
Query: 311 KSYSVDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLS 132
K + A+ VF+ + E+S+++W+ +I G+ G ++L +QM ++ + +TF+
Sbjct: 748 KCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMH 807
Query: 131 AVQACSHLGYLEKGRQFHHKLVISGLE 51
+ ACSH G +E+G+ + + + G+E
Sbjct: 808 ILSACSHAGAVEEGKLYFNSMSEFGVE 834
>ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549302|gb|EEF50791.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 800
Score = 129 bits (324), Expect = 2e-28
Identities = 55/99 (55%), Positives = 80/99 (80%)
Frame = -1
Query: 299 VDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQA 120
VD AY +F+ +Q KS++ WNS+I GF+Q G++ EA+ L DQM+ L+M++VTFL+A+QA
Sbjct: 452 VDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQA 511
Query: 119 CSHLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
CSH+G+LEKG+ HHKL+ G++KD +++TAL DMYAKC
Sbjct: 512 CSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKC 550
Score = 66.6 bits (161), Expect = 2e-09
Identities = 31/99 (31%), Positives = 57/99 (57%)
Frame = -1
Query: 299 VDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQA 120
+ A KVF+ + + L++W+S+I + +G+++E L + + Q++E+D VT LS A
Sbjct: 150 LSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGA 209
Query: 119 CSHLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
C LG+L + H ++ +E +N AL MY++C
Sbjct: 210 CGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRC 248
Score = 60.8 bits (146), Expect = 1e-07
Identities = 25/95 (26%), Positives = 59/95 (62%)
Frame = -1
Query: 290 AYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACSH 111
A++VF+ + E+S+++W+++I G GD A++L +M + ++ + +TF++ + ACSH
Sbjct: 556 AHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSH 615
Query: 110 LGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAK 6
GY+E+G+ + + + +E + + D+ ++
Sbjct: 616 SGYVEEGKFYFNSMKNFEVEPNLEHFACMVDLLSR 650
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/94 (31%), Positives = 51/94 (54%)
Frame = -1
Query: 284 KVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACSHLG 105
KV + + ++++I+WN +I + G EAL + QM Q D + S++ AC+++G
Sbjct: 357 KVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVG 416
Query: 104 YLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
L G Q H + + D +V +L DMY+KC
Sbjct: 417 LLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKC 449
>ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Glycine max]
Length = 828
Score = 129 bits (323), Expect = 3e-28
Identities = 56/99 (56%), Positives = 81/99 (81%)
Frame = -1
Query: 299 VDTAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQA 120
VD AY +F+++ EKS++TWN +I GF+Q+G + EAL L D+M + +++++VTFLSA+QA
Sbjct: 456 VDLAYTIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQA 515
Query: 119 CSHLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
CS+ GYL KG+ HHKLV+SG++KD Y++TAL DMYAKC
Sbjct: 516 CSNSGYLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKC 554
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/96 (30%), Positives = 52/96 (54%)
Frame = -1
Query: 290 AYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACSH 111
A KVF+E++ + L++W+SV+ + ++G E L +L M + + D VT LS +AC
Sbjct: 156 ARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGK 215
Query: 110 LGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
+G L + H ++ + D + +L MY +C
Sbjct: 216 VGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQC 251
>ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein
MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 127 bits (319), Expect = 9e-28
Identities = 53/97 (54%), Positives = 79/97 (81%)
Frame = -1
Query: 293 TAYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACS 114
+AY +FN+++ KS++ WN +I GF+Q+G + EAL+L D+M LE++KVTFLSA+QACS
Sbjct: 458 SAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACS 517
Query: 113 HLGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
+LGYL+KG+ HHK++++G + D Y++TAL DMYAKC
Sbjct: 518 NLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKC 554
Score = 56.6 bits (135), Expect = 2e-06
Identities = 28/96 (29%), Positives = 51/96 (53%)
Frame = -1
Query: 290 AYKVFNEVQEKSLITWNSVIWGFTQSGDAAEALNLLDQMHYQNLEMDKVTFLSAVQACSH 111
A KVF+E+ + L+ W+S+I + ++G E L + M + + D V LS +AC
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215
Query: 110 LGYLEKGRQFHHKLVISGLEKDFYVNTALTDMYAKC 3
+G L + H ++ G+ D ++ +L MY++C
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQC 251