BLASTX nr result

ID: Coptis24_contig00008446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008446
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454872.1| hypothetical protein SORBIDRAFT_03g000480 [S...    82   5e-14
ref|NP_001132696.1| hypothetical protein [Zea mays] gi|194695124...    80   2e-13
ref|NP_001130896.1| hypothetical protein [Zea mays] gi|194690390...    78   7e-13
ref|XP_003566188.1| PREDICTED: beta-amylase 1, chloroplastic-lik...    76   3e-12
gb|AEB00844.1| beta-amylase 8 [Hordeum vulgare subsp. vulgare]         76   3e-12

>ref|XP_002454872.1| hypothetical protein SORBIDRAFT_03g000480 [Sorghum bicolor]
           gi|241926847|gb|EER99991.1| hypothetical protein
           SORBIDRAFT_03g000480 [Sorghum bicolor]
          Length = 442

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -3

Query: 128 FLEWYSGMLLLHGERLCMTA*TIFWGTGVSISGKLAGMHWHY 3
           FLEWYSGMLLLHGERLCMTA  IF GTGV+ISGK+AG+HWHY
Sbjct: 233 FLEWYSGMLLLHGERLCMTADAIFSGTGVTISGKVAGIHWHY 274


>ref|NP_001132696.1| hypothetical protein [Zea mays] gi|194695124|gb|ACF81646.1| unknown
           [Zea mays] gi|413947857|gb|AFW80506.1| hypothetical
           protein ZEAMMB73_795959 [Zea mays]
          Length = 537

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -3

Query: 128 FLEWYSGMLLLHGERLCMTA*TIFWGTGVSISGKLAGMHWHY 3
           FLEWYSGMLLLHGERLCM A  IF GTGV+ISGK+AG+HWHY
Sbjct: 328 FLEWYSGMLLLHGERLCMIADAIFSGTGVTISGKVAGIHWHY 369


>ref|NP_001130896.1| hypothetical protein [Zea mays] gi|194690390|gb|ACF79279.1| unknown
           [Zea mays] gi|414875576|tpg|DAA52707.1| TPA:
           hypothetical protein ZEAMMB73_078483 [Zea mays]
          Length = 539

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = -3

Query: 128 FLEWYSGMLLLHGERLCMTA*TIFWGTGVSISGKLAGMHWHY 3
           FL+WYSGMLLLHGERLCM A  IF GTGV+ISGK+AG+HWHY
Sbjct: 330 FLKWYSGMLLLHGERLCMIADAIFSGTGVTISGKVAGIHWHY 371


>ref|XP_003566188.1| PREDICTED: beta-amylase 1, chloroplastic-like [Brachypodium
           distachyon]
          Length = 556

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 FLEWYSGMLLLHGERLCMTA*TIFWGTGVSISGKLAGMHWHY 3
           FLEWYSGMLLLHGERLC  A  IF GTGV+ISGK++G+HWHY
Sbjct: 347 FLEWYSGMLLLHGERLCTIADAIFSGTGVTISGKVSGIHWHY 388


>gb|AEB00844.1| beta-amylase 8 [Hordeum vulgare subsp. vulgare]
          Length = 464

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = -3

Query: 128 FLEWYSGMLLLHGERLCMTA*TIFWGTGVSISGKLAGMHWHY 3
           FLEWYSGMLLLHGERLC  A  +F GTGV+ISGK++G+HWHY
Sbjct: 255 FLEWYSGMLLLHGERLCAVADAVFSGTGVTISGKVSGIHWHY 296


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