BLASTX nr result

ID: Coptis24_contig00008444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008444
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays] gi|...   264   8e-69
ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea ma...   263   1e-68
gb|AFK43394.1| unknown [Lotus japonicus]                              263   2e-68
ref|XP_002456776.1| hypothetical protein SORBIDRAFT_03g042550 [S...   261   7e-68
gb|ACF86091.1| unknown [Zea mays] gi|413951668|gb|AFW84317.1| hy...   260   1e-67

>gb|ACG32836.1| membrane-associated 30 kDa protein [Zea mays]
           gi|219884263|gb|ACL52506.1| unknown [Zea mays]
          Length = 316

 Score =  264 bits (675), Expect = 8e-69
 Identities = 147/203 (72%), Positives = 163/203 (80%)
 Frame = -1

Query: 612 MRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNAS 433
           MRQATAQV+ASQKRLENK K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNAS
Sbjct: 99  MRQATAQVLASQKRLENKSKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNAS 158

Query: 432 SMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDTLKARAXXXXXXXXXXXXXXXXXXD 253
           S+++QLDQQK VV+NL+SNTRLLESKI EA+ KKDTLKARA                   
Sbjct: 159 SLRSQLDQQKGVVENLISNTRLLESKISEAKQKKDTLKARA------------------- 199

Query: 252 XXXXXXXXXXXXXKVNEMLGTVNTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKF 73
                        KV+EMLG VNTSSALSAF+KMEEKV+AMESQAEAL QLATDDLEGKF
Sbjct: 200 ------QSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLATDDLEGKF 253

Query: 72  AMLETSSVDDDLANLKKELSGSS 4
           A+LETSSVDDDL+ LKKELSGSS
Sbjct: 254 ALLETSSVDDDLSQLKKELSGSS 276


>ref|NP_001130281.1| uncharacterized protein LOC100191375 [Zea mays]
           gi|194688738|gb|ACF78453.1| unknown [Zea mays]
           gi|194701220|gb|ACF84694.1| unknown [Zea mays]
           gi|414879244|tpg|DAA56375.1| TPA: IM30 protein-like
           protein [Zea mays]
          Length = 316

 Score =  263 bits (673), Expect = 1e-68
 Identities = 147/203 (72%), Positives = 163/203 (80%)
 Frame = -1

Query: 612 MRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNAS 433
           MRQATAQV+ASQKRLENK K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNAS
Sbjct: 99  MRQATAQVLASQKRLENKYKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNAS 158

Query: 432 SMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDTLKARAXXXXXXXXXXXXXXXXXXD 253
           S+++QLDQQK VV+NL+SNTRLLESKI EA+ KKDTLKARA                   
Sbjct: 159 SLRSQLDQQKGVVENLISNTRLLESKIAEAKQKKDTLKARA------------------- 199

Query: 252 XXXXXXXXXXXXXKVNEMLGTVNTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKF 73
                        KV+EMLG VNTSSALSAF+KMEEKV+AMESQAEAL QLATDDLEGKF
Sbjct: 200 ------QSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLATDDLEGKF 253

Query: 72  AMLETSSVDDDLANLKKELSGSS 4
           A+LETSSVDDDL+ LKKELSGSS
Sbjct: 254 ALLETSSVDDDLSQLKKELSGSS 276


>gb|AFK43394.1| unknown [Lotus japonicus]
          Length = 326

 Score =  263 bits (672), Expect = 2e-68
 Identities = 147/204 (72%), Positives = 163/204 (79%)
 Frame = -1

Query: 612 MRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNAS 433
           MRQATAQV+ASQKR+ENK K+AQQASE+WYR+AQLAL+KG+E+LAREALKRRKS+ADNAS
Sbjct: 110 MRQATAQVLASQKRMENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNAS 169

Query: 432 SMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDTLKARAXXXXXXXXXXXXXXXXXXD 253
           S K QLDQQK VV+NLVSNTRLLESKI EARSKKDTLKARA                   
Sbjct: 170 SSKAQLDQQKGVVENLVSNTRLLESKISEARSKKDTLKARA------------------- 210

Query: 252 XXXXXXXXXXXXXKVNEMLGTVNTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKF 73
                        KV+EMLG VNTSSALSAF+KMEEKV+ MESQAEAL QL TDDL+GKF
Sbjct: 211 ------QSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMTMESQAEALGQLTTDDLDGKF 264

Query: 72  AMLETSSVDDDLANLKKELSGSSK 1
           A+LE+SSVDDDLANLKKELSGSSK
Sbjct: 265 ALLESSSVDDDLANLKKELSGSSK 288


>ref|XP_002456776.1| hypothetical protein SORBIDRAFT_03g042550 [Sorghum bicolor]
           gi|241928751|gb|EES01896.1| hypothetical protein
           SORBIDRAFT_03g042550 [Sorghum bicolor]
          Length = 316

 Score =  261 bits (667), Expect = 7e-68
 Identities = 145/203 (71%), Positives = 163/203 (80%)
 Frame = -1

Query: 612 MRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNAS 433
           MRQATAQV+ASQKRLENK K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNAS
Sbjct: 99  MRQATAQVLASQKRLENKYKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNAS 158

Query: 432 SMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDTLKARAXXXXXXXXXXXXXXXXXXD 253
           S+++QLDQQK VV+NL+SNT++LESKI EA+ KKDTLKARA                   
Sbjct: 159 SLRSQLDQQKGVVENLISNTKVLESKIAEAKQKKDTLKARA------------------- 199

Query: 252 XXXXXXXXXXXXXKVNEMLGTVNTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKF 73
                        KV+EMLG VNTSSALSAF+KMEEKV+AMESQAEAL QLATDDLEGKF
Sbjct: 200 ------QSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLATDDLEGKF 253

Query: 72  AMLETSSVDDDLANLKKELSGSS 4
           A+LETSSVDDDL+ LKKELSGSS
Sbjct: 254 ALLETSSVDDDLSQLKKELSGSS 276


>gb|ACF86091.1| unknown [Zea mays] gi|413951668|gb|AFW84317.1| hypothetical protein
           ZEAMMB73_808848 [Zea mays]
          Length = 316

 Score =  260 bits (665), Expect = 1e-67
 Identities = 145/203 (71%), Positives = 162/203 (79%)
 Frame = -1

Query: 612 MRQATAQVMASQKRLENKCKSAQQASEDWYRRAQLALEKGDENLAREALKRRKSYADNAS 433
           MRQATAQV+ASQKRLENK K+A+QAS DWYRRAQLAL+KGDE+LAREALKRRKSYADNAS
Sbjct: 99  MRQATAQVLASQKRLENKYKAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNAS 158

Query: 432 SMKTQLDQQKTVVDNLVSNTRLLESKIQEARSKKDTLKARAXXXXXXXXXXXXXXXXXXD 253
           S+++QLDQQK VV+NL+SNTR+LESKI EA+ KKDTLKARA                   
Sbjct: 159 SLRSQLDQQKGVVENLISNTRVLESKIAEAKQKKDTLKARA------------------- 199

Query: 252 XXXXXXXXXXXXXKVNEMLGTVNTSSALSAFDKMEEKVLAMESQAEALTQLATDDLEGKF 73
                        KV+EMLG VNTSSALSAF+KMEEKV+AMESQAEAL QLATDDLEGKF
Sbjct: 200 ------QSAKTATKVSEMLGNVNTSSALSAFEKMEEKVMAMESQAEALGQLATDDLEGKF 253

Query: 72  AMLETSSVDDDLANLKKELSGSS 4
           A+LE SSVDDDL+ LKKELSGSS
Sbjct: 254 ALLENSSVDDDLSQLKKELSGSS 276


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