BLASTX nr result

ID: Coptis24_contig00008438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008438
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Viti...   268   2e-69
emb|CAN72815.1| hypothetical protein VITISV_004099 [Vitis vinifera]   268   2e-69
ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Viti...   258   3e-66
emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]   258   3e-66
ref|XP_004140032.1| PREDICTED: clathrin light chain 1-like [Cucu...   239   1e-60

>ref|XP_003635272.1| PREDICTED: clathrin light chain 1-like [Vitis vinifera]
          Length = 375

 Score =  268 bits (686), Expect = 2e-69
 Identities = 149/278 (53%), Positives = 185/278 (66%), Gaps = 31/278 (11%)
 Frame = -1

Query: 1410 DTFSIDGDEVIVNQDRPFEDDGYIGYDPRLPSQRYESSSY--------------SNNFQE 1273
            D +S DG++V  + +RPF+DD ++ YDP LPS+R++S +               +  F  
Sbjct: 5    DAYSNDGEDVRASSNRPFDDDTFVEYDPSLPSRRFDSYASFATADDYAADDAPPAGGFPV 64

Query: 1272 EEENISTVLLDPI-HVSDVLPPPPSDH------VGINNNNGFRSDDVYSGHHQSNG---- 1126
            E+E    V +D + H  D + P P  +      +  + N  F  D         NG    
Sbjct: 65   EDE----VTVDHVSHNVDGVHPLPGMYGFEGSSMADDPNPNFSEDSFSVPIANGNGKPYD 120

Query: 1125 --ADVDDLFTSDGPVLPPPTE----EGFALREWRRLNAIHLEEKEKQEKDMRNQILDEAE 964
              AD +D+F+SDGPVLPPPTE    EGF LREWRR NAI LEEKEK+EK+MRNQI++EAE
Sbjct: 121  ISADNEDIFSSDGPVLPPPTEMQPEEGFILREWRRQNAIQLEEKEKREKEMRNQIIEEAE 180

Query: 963  EYKRSFYEKRKLNCETNKTNNREKEKLYLADREKFHKEADKQYWKAIAELIPHEVPNIEX 784
            EYKR+FYEKRK+N ETNKTNNRE+EKLYLA++EKFHKEADKQYWKAIAELIPHEVPNIE 
Sbjct: 181  EYKRAFYEKRKVNIETNKTNNREREKLYLANQEKFHKEADKQYWKAIAELIPHEVPNIEK 240

Query: 783  XXXXXXXXXXPSIVFVQGPKPGKPTDLARMRQVLLKLK 670
                      PSI  +QGPKPGKPTDL+RMR +L+KLK
Sbjct: 241  KRGKKDPDKKPSITVIQGPKPGKPTDLSRMRHILVKLK 278


>emb|CAN72815.1| hypothetical protein VITISV_004099 [Vitis vinifera]
          Length = 322

 Score =  268 bits (686), Expect = 2e-69
 Identities = 149/278 (53%), Positives = 185/278 (66%), Gaps = 31/278 (11%)
 Frame = -1

Query: 1410 DTFSIDGDEVIVNQDRPFEDDGYIGYDPRLPSQRYESSSY--------------SNNFQE 1273
            D +S DG++V  + +RPF+DD ++ YDP LPS+R++S +               +  F  
Sbjct: 5    DAYSNDGEDVRASSNRPFDDDTFVEYDPSLPSRRFDSYASFATADDYAADDAPPAGGFPV 64

Query: 1272 EEENISTVLLDPI-HVSDVLPPPPSDH------VGINNNNGFRSDDVYSGHHQSNG---- 1126
            E+E    V +D + H  D + P P  +      +  + N  F  D         NG    
Sbjct: 65   EDE----VTVDHVSHNVDGVHPLPGMYGFEGSSMADDPNPNFSEDSFSVPIANGNGKPYD 120

Query: 1125 --ADVDDLFTSDGPVLPPPTE----EGFALREWRRLNAIHLEEKEKQEKDMRNQILDEAE 964
              AD +D+F+SDGPVLPPPTE    EGF LREWRR NAI LEEKEK+EK+MRNQI++EAE
Sbjct: 121  ISADNEDIFSSDGPVLPPPTEMQPEEGFILREWRRQNAIQLEEKEKREKEMRNQIIEEAE 180

Query: 963  EYKRSFYEKRKLNCETNKTNNREKEKLYLADREKFHKEADKQYWKAIAELIPHEVPNIEX 784
            EYKR+FYEKRK+N ETNKTNNRE+EKLYLA++EKFHKEADKQYWKAIAELIPHEVPNIE 
Sbjct: 181  EYKRAFYEKRKVNIETNKTNNREREKLYLANQEKFHKEADKQYWKAIAELIPHEVPNIEK 240

Query: 783  XXXXXXXXXXPSIVFVQGPKPGKPTDLARMRQVLLKLK 670
                      PSI  +QGPKPGKPTDL+RMR +L+KLK
Sbjct: 241  KRGKKDPDKKPSITVIQGPKPGKPTDLSRMRHILVKLK 278


>ref|XP_002269465.1| PREDICTED: clathrin light chain 2-like [Vitis vinifera]
          Length = 319

 Score =  258 bits (659), Expect = 3e-66
 Identities = 141/266 (53%), Positives = 177/266 (66%), Gaps = 19/266 (7%)
 Frame = -1

Query: 1410 DTFSIDGDE---VIVNQDRPFEDDGYIGYDPRLPSQRYESSSYSNNFQEEEENI------ 1258
            D+F   GDE         RPF+DDGY+GYDPRLPSQR++S +   + +  +E++      
Sbjct: 6    DSFGQPGDESRPAAAASTRPFDDDGYLGYDPRLPSQRFDSFTNFADSESVKESVEDSPIY 65

Query: 1257 ---STVLLDPIHVSDVLPPPPSDHVGINNNNGFRSD--DVYSGHHQSNGADVDDLFT-SD 1096
               S    D +  S  +P  PS      +  GF +D  +  S   ++NG   D+ F  SD
Sbjct: 66   NSASYAAADDVFTSQPIPDTPSPPPIYVSGGGFAADQHEFSSFSPEANGKVFDEGFAGSD 125

Query: 1095 GPVLPPPTE----EGFALREWRRLNAIHLEEKEKQEKDMRNQILDEAEEYKRSFYEKRKL 928
            GP+LPPPTE    EGFALREWRR NAI LEEKEK+EK++ +QI+DEA+EYK  FY +R +
Sbjct: 126  GPILPPPTEMQSEEGFALREWRRQNAITLEEKEKREKELLSQIIDEADEYKVEFYRRRTI 185

Query: 927  NCETNKTNNREKEKLYLADREKFHKEADKQYWKAIAELIPHEVPNIEXXXXXXXXXXXPS 748
             CETNKT NREKEKL++A++EKFH EADK YWKAIAELIP+EVP IE           PS
Sbjct: 186  TCETNKTTNREKEKLFIANQEKFHAEADKNYWKAIAELIPNEVPAIEKKRGKKDQDKKPS 245

Query: 747  IVFVQGPKPGKPTDLARMRQVLLKLK 670
            IV +QGPKPGKPTDL+RMRQ+LLKLK
Sbjct: 246  IVVIQGPKPGKPTDLSRMRQILLKLK 271


>emb|CAN69697.1| hypothetical protein VITISV_014565 [Vitis vinifera]
          Length = 319

 Score =  258 bits (659), Expect = 3e-66
 Identities = 141/266 (53%), Positives = 177/266 (66%), Gaps = 19/266 (7%)
 Frame = -1

Query: 1410 DTFSIDGDE---VIVNQDRPFEDDGYIGYDPRLPSQRYESSSYSNNFQEEEENI------ 1258
            D+F   GDE         RPF+DDGY+GYDPRLPSQR++S +   + +  +E++      
Sbjct: 6    DSFGQPGDESRPAAAASTRPFDDDGYLGYDPRLPSQRFDSFTNFADSESVKESVEDSPIY 65

Query: 1257 ---STVLLDPIHVSDVLPPPPSDHVGINNNNGFRSD--DVYSGHHQSNGADVDDLFT-SD 1096
               S    D +  S  +P  PS      +  GF +D  +  S   ++NG   D+ F  SD
Sbjct: 66   NSASYAAADDVFTSQPIPDTPSPPPIYVSGGGFAADQHEFSSFSPEANGKVFDEGFAGSD 125

Query: 1095 GPVLPPPTE----EGFALREWRRLNAIHLEEKEKQEKDMRNQILDEAEEYKRSFYEKRKL 928
            GP+LPPPTE    EGFALREWRR NAI LEEKEK+EK++ +QI+DEA+EYK  FY +R +
Sbjct: 126  GPILPPPTEMQSEEGFALREWRRQNAITLEEKEKREKELLSQIIDEADEYKVEFYRRRTI 185

Query: 927  NCETNKTNNREKEKLYLADREKFHKEADKQYWKAIAELIPHEVPNIEXXXXXXXXXXXPS 748
             CETNKT NREKEKL++A++EKFH EADK YWKAIAELIP+EVP IE           PS
Sbjct: 186  TCETNKTTNREKEKLFIANQEKFHAEADKNYWKAIAELIPNEVPAIEKKRGKKDQDKKPS 245

Query: 747  IVFVQGPKPGKPTDLARMRQVLLKLK 670
            IV +QGPKPGKPTDL+RMRQ+LLKLK
Sbjct: 246  IVVIQGPKPGKPTDLSRMRQILLKLK 271


>ref|XP_004140032.1| PREDICTED: clathrin light chain 1-like [Cucumis sativus]
          Length = 340

 Score =  239 bits (611), Expect = 1e-60
 Identities = 135/261 (51%), Positives = 170/261 (65%), Gaps = 28/261 (10%)
 Frame = -1

Query: 1368 DRPFEDDGYIGYDPRLPSQRYESS-----SYSNNFQEEEENISTVLLDPIHVSDVLPPPP 1204
            D+PF+DD Y+ +D  LPSQ Y+SS     S+  +  + +        +   +SD+  P  
Sbjct: 25   DQPFDDDAYMAFDSTLPSQPYDSSTPFSPSHDISSPDHQPQPPPSFFEDNVISDIHSPGN 84

Query: 1203 SDH--------VGINNNNG-----FRSDDVYSGHHQS-----NGADVDD--LFTSDGPVL 1084
            + +         G++N N      F S D  + H  +      G   DD  LF SDGPVL
Sbjct: 85   TTNPNLSDAYDFGVSNPNPDYVSPFHSADADADHDNAAAPAVGGGAFDDGGLFASDGPVL 144

Query: 1083 PPPTE---EGFALREWRRLNAIHLEEKEKQEKDMRNQILDEAEEYKRSFYEKRKLNCETN 913
            P P+E   EG A REWRR NAI LE+KEK+EK+MRNQI++EAEEYK SFYEKR++NCETN
Sbjct: 145  PDPSEMREEGNARREWRRQNAIDLEDKEKKEKEMRNQIINEAEEYKASFYEKRRVNCETN 204

Query: 912  KTNNREKEKLYLADREKFHKEADKQYWKAIAELIPHEVPNIEXXXXXXXXXXXPSIVFVQ 733
            K +NRE+EKLY A++E+FHKEADK YWKAIAE+IP EVPNIE           PSI+ VQ
Sbjct: 205  KAHNREREKLYHANQERFHKEADKHYWKAIAEIIPREVPNIEKRRGKKDPDKKPSILVVQ 264

Query: 732  GPKPGKPTDLARMRQVLLKLK 670
            GPKPGKPTDLAR+RQ+LLKLK
Sbjct: 265  GPKPGKPTDLARLRQILLKLK 285


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