BLASTX nr result
ID: Coptis24_contig00008436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00008436
(2349 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263... 401 e-109
ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus com... 358 3e-96
emb|CBI23350.3| unnamed protein product [Vitis vinifera] 223 2e-55
gb|AEY85029.1| cohesin subunit [Camellia sinensis] 217 1e-53
ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|2... 192 4e-46
>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
Length = 1335
Score = 401 bits (1031), Expect = e-109
Identities = 275/718 (38%), Positives = 386/718 (53%), Gaps = 28/718 (3%)
Frame = -3
Query: 2347 NLPVPEPEMLLSVPASVPDAQNDLLVQLTPEK--EVSEEGGNGLKNLSGRKRQLMESAPV 2174
N +P PE LLS+P + D ND LV+LTP+K E SE G +KN+SG+KR ES
Sbjct: 653 NSDLPAPEKLLSMPEGLVDPPNDFLVELTPDKVLEGSEGDGAAMKNISGKKRSFTESTLT 712
Query: 2173 QQYGSSTKLSGIPRSKRTVXXXXXXXXXXXXXLVGRKSSALKLRPTPPPTEIAARKRPRI 1994
+S + G+ +S++T LVGR+SSALK++PTPPP E+ + KRPR
Sbjct: 713 LHSLNSVETFGVSKSRKTAESIPDDDDLLSSILVGRRSSALKMKPTPPP-EVVSMKRPRT 771
Query: 1993 TPRASVVKRKVLLDDTMVLHGDTIRQQLTSTEDIRRLRKKAPCTRPEIWVIQKHLLEDEI 1814
R++ KRKVL+DD MVLHGDTIRQQLTSTEDIRR+RKKAPCTR EIW+IQK LEDEI
Sbjct: 772 ATRSNASKRKVLMDDPMVLHGDTIRQQLTSTEDIRRVRKKAPCTRLEIWMIQKQFLEDEI 831
Query: 1813 FNEPLFSGMSVDLIGLQNRIFDVTEFRDSGMNVDRPVSEVPGEVMWSSGTSLIGEANTEG 1634
F+EP+ +GMS +L+ L N +D++ R N SEV E+ S ++ E EG
Sbjct: 832 FSEPISTGMSAELMSLYNETYDLSTVRVFENNAS---SEVAKEMELSVKPNVTKEIGEEG 888
Query: 1633 LDEPVAASGGEANESTATIVLVDSQLCEEHLSDCIDFGTQQLTRPLTDISPNDLQKGQAD 1454
E +A ES ++V ++Q E+H D TQ T LQ
Sbjct: 889 SVESLAVRNDGEVESAQSLVQTENQHGEDHSLGIHDNDTQVKT----------LQCEFFG 938
Query: 1453 ISSPMEIDDGSV-VANTMDH----------TDNTVSEDRCNQTLCSEIKSLLVEKSNGVQ 1307
+ MEID S+ VA+ D T +S D C+ ++ S ++S L+EK++G
Sbjct: 939 EIAEMEIDGQSIAVADASDRDATHGVDSLSTAGPISGDICDLSVGSMVQSTLMEKTSGAD 998
Query: 1306 T--------ILPNDGNLDTQSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1151
+ + + LDT SV
Sbjct: 999 STQLIDELCVSSFNQRLDTISV----------EKDASAVDSSNGKGVDTIEVAENNNDNI 1048
Query: 1150 XGVPMENDRSAQEISESSSVKVMLQDVPQVVDACDVCLSPKN-------TMLEKCSGDNR 992
G+ E+ + + + E + V +Q V + VC +P + T+ + SG +
Sbjct: 1049 VGIGNESRQKGEPLMEET---VGIQTVETGEEVHTVCAAPADNENSSLATVTLEASGCSN 1105
Query: 991 ADVPEDASATPTFVTDCHFKEGIRSESEYVTRDENVVDVAGNSSSTFMCIEDPQRDFSCQ 812
V + T + ++K GI ++ E + + D N +S +C E+P+ + S
Sbjct: 1106 LVVVAEDQTTEEII---NYKSGIVNDVEVLDAELGYDD--KNPTSNSICSEEPKIESSYA 1160
Query: 811 SEFNITTETVPFDEFENQGSRDADLAGNPSRLSADLGGTMAAETTSLYNTSLETPCDLGN 632
E + + F+ EN D + P L A+ + E T++ ++++E D N
Sbjct: 1161 KEIDEEMKNAFFNGEENIPLNDIE---KPVFLEAESHTVVDTEFTAIDHSAIEDHGDFAN 1217
Query: 631 TLDGNDTGFLNFDDEDTIEEDNGIPNAEEVGILDNSGWSSRTRGVAKYLQTLFDTESGHG 452
G+DT FLN DD++ ++D+ +P+AEE L+NSGWSSRTR VAKYLQ LFD E+ HG
Sbjct: 1218 ITVGHDTEFLNVDDDEVADDDDYMPSAEENRFLENSGWSSRTRAVAKYLQNLFDKEAEHG 1277
Query: 451 RKVLSMDNLLSGKTRKEASRMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 278
+KV+ M+NLL+GKTRKEASRMFFETLVLKTRDYI VEQE FD I++KPRVKL+KSDF
Sbjct: 1278 KKVIPMNNLLAGKTRKEASRMFFETLVLKTRDYIQVEQEKPFDNINVKPRVKLMKSDF 1335
>ref|XP_002514774.1| cohesin subunit rad21, putative [Ricinus communis]
gi|223545825|gb|EEF47328.1| cohesin subunit rad21,
putative [Ricinus communis]
Length = 1247
Score = 358 bits (920), Expect = 3e-96
Identities = 276/709 (38%), Positives = 374/709 (52%), Gaps = 22/709 (3%)
Frame = -3
Query: 2338 VPEPEMLLSVPASVPDAQNDLLVQLTPEKEVSEEG---GNGLKNLSGRKRQLMESAPVQQ 2168
+P PE LLS+P ++ D +DLLV+ TP+KEV EEG G G++ ++G+KR ESA Q
Sbjct: 579 LPAPEKLLSIPQTLLDKPHDLLVE-TPDKEVQEEGDGSGAGIR-ITGKKRSFAESALTVQ 636
Query: 2167 YGSSTKLSGIPRSKRTVXXXXXXXXXXXXXLVGRKSSALKLRPTPPPTEIAARKRPRITP 1988
+S + G+ RSKRTV LVGRKSSALK++PTPP E+ + KR R T
Sbjct: 637 SLNSVESFGVTRSKRTVESIPDDDDLLSSILVGRKSSALKMKPTPPAPEVPSMKRARFTS 696
Query: 1987 RASVVKRKVLLDDTMVLHGDTIRQQLTSTEDIRRLRKKAPCTRPEIWVIQKHLLEDEIFN 1808
R S +KRKVL+DD+MVLHGD IRQQLT+TEDIRRLRKKAPCTR EI +IQ+ LEDEIF+
Sbjct: 697 RPSALKRKVLMDDSMVLHGDIIRQQLTNTEDIRRLRKKAPCTRTEILMIQRQFLEDEIFS 756
Query: 1807 EPLFSGMSVDLIGLQNRIFD-----VTEFRDSGMNVDRPVSEVPGEVMWSSGTSLIGEAN 1643
EP+ +GMS L + + FD V E D+ M V++ S+ + +
Sbjct: 757 EPVLTGMSAYLTRMHSEAFDWSGIKVCENDDNNMASLEVVND-----EHSARQIVKQDGG 811
Query: 1642 TEGLDEPVAASGGEANESTATIVLVDSQLCEEHLSDCIDFGTQQLTRPLTDISPNDLQKG 1463
EG EPV +++ + D+Q E+HL D + + + +
Sbjct: 812 MEGSTEPVGCRTDIEEQTSEVSINKDNQQVEDHLGS-YDIDNEHMNGVVDIVGHRTSVHE 870
Query: 1462 QADISSPMEIDD-GSVVANTMDHT----DNTVSEDRCNQTLCSEIKSLLVEKSNGVQT-I 1301
+S ME D S V++ ++H+ + + SE L E+ S V++S V T I
Sbjct: 871 HLGETSEMENDKVNSEVSDAINHSAPGLETSQSEPASGDIL--EMPSATVDQS--VDTPI 926
Query: 1300 LPNDGNLDTQSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPMEND-- 1127
+P+D + Q + + +E
Sbjct: 927 IPSD-EIHNQLIEDVAGLRDMSNDIGLDCTEVVDNCAKKIGAVEAELRTGEELLLEESKV 985
Query: 1126 RSAQEISESSSVKVMLQDVPQVVDACDVCLSPKNTMLEKCSGDNRADVPEDASATPTFVT 947
R++ EI V D D D L+ N E S N + V D + F
Sbjct: 986 RASVEIGGDEQV-----DGSAPNDGADASLA--NVSSEAGSFVNFSSVNIDQA----FEE 1034
Query: 946 DCHFKEGIRSESEYVTRDENVVDVAGNSSSTFMCIEDPQR--DFSCQSEFNI-TTETVPF 776
++K G+ S++ + GNS M I+D + D C E I +T T+
Sbjct: 1035 IENYKHGVFSDNG---------GLGGNS----MGIDDKDQTSDHLCSEEAKINSTYTIGL 1081
Query: 775 D-EFENQGSRDADLAGNPSRLSADLGGTMAAETTSL-YNTSLETPCDLGNTLDGNDTGFL 602
D +F+N D D N D TM + + T+ E D+ + NDT FL
Sbjct: 1082 DGDFKNTSMNDGD---NTVSQLVDQQDTMDTQNAPPDHVTTGECDQDIRDVGFANDTEFL 1138
Query: 601 NFDDEDTIEEDN-GIPNAEEVGILDNSGWSSRTRGVAKYLQTLFDTESGHGRKVLSMDNL 425
N DD++ E+DN G+PNAE+ +L+NSGWSSRTR VAKYLQTLFD E+ HGRKVL MDNL
Sbjct: 1139 NVDDDEIDEDDNEGLPNAEDPRLLENSGWSSRTRAVAKYLQTLFDKEAEHGRKVLLMDNL 1198
Query: 424 LSGKTRKEASRMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 278
L+GKTRKEASRMFFETLVLKT+DY+HVEQ FD I+IKPR KL+KSDF
Sbjct: 1199 LTGKTRKEASRMFFETLVLKTKDYVHVEQGKPFDNINIKPRAKLMKSDF 1247
>emb|CBI23350.3| unnamed protein product [Vitis vinifera]
Length = 1133
Score = 223 bits (568), Expect = 2e-55
Identities = 131/283 (46%), Positives = 172/283 (60%), Gaps = 2/283 (0%)
Frame = -3
Query: 2347 NLPVPEPEMLLSVPASVPDAQNDLLVQLTPEK--EVSEEGGNGLKNLSGRKRQLMESAPV 2174
N +P PE LLS+P + D ND LV+LTP+K E SE G +KN+SG+KR ES
Sbjct: 552 NSDLPAPEKLLSMPEGLVDPPNDFLVELTPDKVLEGSEGDGAAMKNISGKKRSFTESTLT 611
Query: 2173 QQYGSSTKLSGIPRSKRTVXXXXXXXXXXXXXLVGRKSSALKLRPTPPPTEIAARKRPRI 1994
+S + G+ +S++T LVGR+SSALK++PTPPP E+ + KRPR
Sbjct: 612 LHSLNSVETFGVSKSRKTAESIPDDDDLLSSILVGRRSSALKMKPTPPP-EVVSMKRPRT 670
Query: 1993 TPRASVVKRKVLLDDTMVLHGDTIRQQLTSTEDIRRLRKKAPCTRPEIWVIQKHLLEDEI 1814
R++ KRKVL+DD MVLHGDTIRQQLTSTEDIRR+RKKAPCTR EIW+IQK LEDEI
Sbjct: 671 ATRSNASKRKVLMDDPMVLHGDTIRQQLTSTEDIRRVRKKAPCTRLEIWMIQKQFLEDEI 730
Query: 1813 FNEPLFSGMSVDLIGLQNRIFDVTEFRDSGMNVDRPVSEVPGEVMWSSGTSLIGEANTEG 1634
F+EP+ +GMS +L+ L N +D++ R N SEV E+ S ++ E EG
Sbjct: 731 FSEPISTGMSAELMSLYNETYDLSTVRVFENNAS---SEVAKEMELSVKPNVTKEIGEEG 787
Query: 1633 LDEPVAASGGEANESTATIVLVDSQLCEEHLSDCIDFGTQQLT 1505
E +A ES ++V ++Q E+H D TQ T
Sbjct: 788 SVESLAVRNDGEVESAQSLVQTENQHGEDHSLGIHDNDTQVKT 830
Score = 192 bits (489), Expect = 3e-46
Identities = 119/297 (40%), Positives = 174/297 (58%), Gaps = 7/297 (2%)
Frame = -3
Query: 1147 GVPMENDRSAQEISESSSVKVMLQDVPQVVDACDVCLSPKN-------TMLEKCSGDNRA 989
G+ E+ + + + E + V +Q V + VC +P + T+ + SG +
Sbjct: 848 GIGNESRQKGEPLMEET---VGIQTVETGEEVHTVCAAPADNENSSLATVTLEASGCSNL 904
Query: 988 DVPEDASATPTFVTDCHFKEGIRSESEYVTRDENVVDVAGNSSSTFMCIEDPQRDFSCQS 809
V + T + ++K GI ++ E + + D N +S +C E+P+ + S
Sbjct: 905 VVVAEDQTTEEII---NYKSGIVNDVEVLDAELGYDDK--NPTSNSICSEEPKIESSYAK 959
Query: 808 EFNITTETVPFDEFENQGSRDADLAGNPSRLSADLGGTMAAETTSLYNTSLETPCDLGNT 629
E + + F+ EN D + P L A+ + E T++ ++++E D N
Sbjct: 960 EIDEEMKNAFFNGEENIPLNDIE---KPVFLEAESHTVVDTEFTAIDHSAIEDHGDFANI 1016
Query: 628 LDGNDTGFLNFDDEDTIEEDNGIPNAEEVGILDNSGWSSRTRGVAKYLQTLFDTESGHGR 449
G+DT FLN DD++ ++D+ +P+AEE L+NSGWSSRTR VAKYLQ LFD E+ HG+
Sbjct: 1017 TVGHDTEFLNVDDDEVADDDDYMPSAEENRFLENSGWSSRTRAVAKYLQNLFDKEAEHGK 1076
Query: 448 KVLSMDNLLSGKTRKEASRMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKSDF 278
KV+ M+NLL+GKTRKEASRMFFETLVLKTRDYI VEQE FD I++KPRVKL+KSDF
Sbjct: 1077 KVIPMNNLLAGKTRKEASRMFFETLVLKTRDYIQVEQEKPFDNINVKPRVKLMKSDF 1133
>gb|AEY85029.1| cohesin subunit [Camellia sinensis]
Length = 1336
Score = 217 bits (553), Expect = 1e-53
Identities = 136/354 (38%), Positives = 195/354 (55%), Gaps = 24/354 (6%)
Frame = -3
Query: 2347 NLPVPEPEMLLSVPASVPDAQNDLLVQLTPEKE---VSEEGGNGLKNLSGRKRQLMESAP 2177
N +P PE LLSVP + D Q++LL++ TP+K +E G+ N++G+KR ES
Sbjct: 653 NSELPVPEKLLSVPEGLADLQDNLLMESTPDKTHLATGDESDAGINNIAGKKRSFTESTM 712
Query: 2176 VQQYGSSTKLSGIPRSKRTVXXXXXXXXXXXXXLVGRKSSALKLRPTPPPTEIAARKRPR 1997
Q +S + G+ SKRT LVGR+SS LK++PTPPP + KRPR
Sbjct: 713 TLQSLNSVESLGMVHSKRTKESVPDDNDLLSSILVGRRSSVLKMKPTPPPA-MTCMKRPR 771
Query: 1996 ITPRASVVKRKVLLDDTMVLHGDTIRQQLTSTEDIRRLRKKAPCTRPEIWVIQKHLLEDE 1817
ITPR KRK+L+DDTMVLHGD IRQQLTSTEDIRR+RKKAPCT PEIW+IQK LEDE
Sbjct: 772 ITPRVYASKRKLLMDDTMVLHGDVIRQQLTSTEDIRRIRKKAPCTHPEIWMIQKGFLEDE 831
Query: 1816 IFNEPLFSGMSVDLIGLQNRIFDVTEFRDS------------------GMNVDRPVSEVP 1691
IF+EP+F+G+S +L L ++ +D++E R + V+ +E
Sbjct: 832 IFSEPIFTGLSTELALLNSQTYDLSEIRVTQNDVHDAFLETAADLILVSKKVENNPTEAA 891
Query: 1690 GEVMWSSGTSLIGEANTEGLDEP-VAASGGEANESTATIVLVDSQLCEEHLSDCIDFGTQ 1514
++ +S + + G++E V + GEA S ++QL EEH+ TQ
Sbjct: 892 NDMEFSMEPDVNQKTGKGGINESMVVRNNGEAESS-------ENQLVEEHVLQSQGHDTQ 944
Query: 1513 QLTRPLTDI--SPNDLQKGQADISSPMEIDDGSVVANTMDHTDNTVSEDRCNQT 1358
+ D+ +P+ + K +I +EID SV + H ++ + + T
Sbjct: 945 VQMEAIYDVLEAPSLISKHSKEIGE-IEIDGASVCVADVLHLATSLGVESASST 997
Score = 187 bits (475), Expect = 1e-44
Identities = 95/141 (67%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Frame = -3
Query: 697 TMAAETTSLYNTSLETPCDLGNTLDGNDTGFLNFDDEDTIEEDN-GIPNAEEVGILDNSG 521
T+ A+ ++ +T E D T+DG+DTGFLN DD+D EED+ +P+AE+ L+NSG
Sbjct: 1196 TIDADIATISHTGTEDCDDFDYTIDGHDTGFLNVDDDDAAEEDDHDVPSAEQTSFLENSG 1255
Query: 520 WSSRTRGVAKYLQTLFDTESGHGRKVLSMDNLLSGKTRKEASRMFFETLVLKTRDYIHVE 341
WSSRTR VAKYLQ LFD E+ HGRKVLSMDNLL GKTRKEASRMFFE LVLKTRDYIHVE
Sbjct: 1256 WSSRTRAVAKYLQVLFDKEAEHGRKVLSMDNLLVGKTRKEASRMFFEALVLKTRDYIHVE 1315
Query: 340 QENAFDIISIKPRVKLVKSDF 278
Q +FD I+IKPRVKL+KSDF
Sbjct: 1316 QGASFDDINIKPRVKLMKSDF 1336
>ref|XP_002315112.1| predicted protein [Populus trichocarpa] gi|222864152|gb|EEF01283.1|
predicted protein [Populus trichocarpa]
Length = 1065
Score = 192 bits (487), Expect = 4e-46
Identities = 108/215 (50%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Frame = -3
Query: 2338 VPEPEMLLSVPASVPDAQNDLLVQLTPEKEVSEEGGNGLK--NLSGRKRQLMESAPVQQY 2165
+P PE LLSVP + D NDLLV+ TP+KE+ + G N++G+KR E++ Q
Sbjct: 442 LPTPEKLLSVPQELLDKPNDLLVESTPDKEMVDGGDRSSAGTNITGKKRSFTENSLTVQS 501
Query: 2164 GSSTKLSGIPRSKRTVXXXXXXXXXXXXXLVGRKSSALKLRPTPPPTEIAARKRPRITPR 1985
+S G+ RSKRTV LVGR+SS LK++PTPP E+A+ KR R R
Sbjct: 502 LNSIDSFGVSRSKRTVDSIPDDDDLLSSILVGRRSSVLKMKPTPPAPEVASMKRARSVSR 561
Query: 1984 ASVVKRKVLLDDTMVLHGDTIRQQLTSTEDIRRLRKKAPCTRPEIWVIQKHLLEDEIFNE 1805
S +KRKVL+DD+MVL GDTIRQQLT+TEDIRRLRKKAPCTR EI IQ+ L++EIF+E
Sbjct: 562 PSAMKRKVLMDDSMVLLGDTIRQQLTNTEDIRRLRKKAPCTRTEILTIQRQSLDEEIFSE 621
Query: 1804 PLFSGMSVDLIGLQNRIFDVTEFRDSGMNVDRPVS 1700
P+ +GMS +L LQ+ FD++ D N D S
Sbjct: 622 PVLTGMSAELTCLQSETFDLSRI-DLAENDDNNTS 655
Score = 171 bits (434), Expect = 6e-40
Identities = 83/122 (68%), Positives = 100/122 (81%)
Frame = -3
Query: 643 DLGNTLDGNDTGFLNFDDEDTIEEDNGIPNAEEVGILDNSGWSSRTRGVAKYLQTLFDTE 464
DL + NDT FLN DD+ E+D+G+P E+ +LDNSGWSSRTR VAKY+QT+FD E
Sbjct: 944 DLQDVAFANDTEFLNVDDDMGEEDDDGMPGPEDARLLDNSGWSSRTRAVAKYVQTIFDNE 1003
Query: 463 SGHGRKVLSMDNLLSGKTRKEASRMFFETLVLKTRDYIHVEQENAFDIISIKPRVKLVKS 284
G+GRKV+S+D+LL+GKTRKEASRMFFETLVLKTRDYIHVEQ FD I++KPR KL+KS
Sbjct: 1004 GGNGRKVISVDSLLAGKTRKEASRMFFETLVLKTRDYIHVEQLKPFDSINVKPRAKLMKS 1063
Query: 283 DF 278
DF
Sbjct: 1064 DF 1065