BLASTX nr result

ID: Coptis24_contig00008434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008434
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32643.3| unnamed protein product [Vitis vinifera]              166   7e-39
ref|XP_002525212.1| conserved hypothetical protein [Ricinus comm...   158   2e-36
ref|XP_002309441.1| predicted protein [Populus trichocarpa] gi|2...   150   5e-34
ref|XP_004142098.1| PREDICTED: uncharacterized protein LOC101220...   145   2e-32
ref|XP_003521362.1| PREDICTED: uncharacterized protein LOC100814...   131   3e-28

>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score =  166 bits (421), Expect = 7e-39
 Identities = 85/156 (54%), Positives = 110/156 (70%), Gaps = 2/156 (1%)
 Frame = +2

Query: 533 PRVSG*MDSTCETLECGSPLANVYEIPGEPAIVIDGVPNVDSSNHFQPHTVTANDAQSKR 712
           P + G M++  +  E  +    V+EI GEPAIVI+GVP+V S++    H  T +D  S +
Sbjct: 3   PGLGGTMENQSKEQEFETLPTGVFEISGEPAIVINGVPDVSSNDGSLVHCDTISDTGSHQ 62

Query: 713 DPGFGEWLEGRVVEKSFGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPL 892
           +  FGEWLEGR V K FG Q YSG VT+F++E  WYRVVYEDGDFEDLEWHELEE+LVPL
Sbjct: 63  ETVFGEWLEGREVRKLFGGQYYSGVVTQFDKEAGWYRVVYEDGDFEDLEWHELEEVLVPL 122

Query: 893 DVAIPLKTLALKRLRKNEKNAQKSSGNHPT--SRRL 994
           DV++PLK+LA+K +RKN++  QK     P   +RRL
Sbjct: 123 DVSVPLKSLAMKIIRKNQRPIQKPGKEVPKCGNRRL 158


>ref|XP_002525212.1| conserved hypothetical protein [Ricinus communis]
           gi|223535509|gb|EEF37178.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score =  158 bits (399), Expect = 2e-36
 Identities = 79/143 (55%), Positives = 106/143 (74%), Gaps = 10/143 (6%)
 Frame = +2

Query: 566 ETLECGSPLANVYEIPGEPAIVIDGVPNVDSSNHFQPHTVTANDAQSKRDPG-------- 721
           E+L+ G     V E+PGEPAIVI+GVP+++ S+     + TAND +S+R+          
Sbjct: 11  ESLQTG-----VLELPGEPAIVINGVPDINKSDGSLVVSSTANDTESQRNTSPDTEILGN 65

Query: 722 --FGEWLEGRVVEKSFGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLD 895
             FGEWLEGR V+K FGE++Y+G VT+F++ET WYRVVYEDGDFEDLEW ELE  LVPLD
Sbjct: 66  ASFGEWLEGREVQKWFGEKMYTGTVTEFDKETGWYRVVYEDGDFEDLEWQELEGFLVPLD 125

Query: 896 VAIPLKTLALKRLRKNEKNAQKS 964
           + IPLK+LALK ++K++K+ +KS
Sbjct: 126 ITIPLKSLALKIIKKSQKSTEKS 148


>ref|XP_002309441.1| predicted protein [Populus trichocarpa] gi|222855417|gb|EEE92964.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  150 bits (379), Expect = 5e-34
 Identities = 75/152 (49%), Positives = 103/152 (67%), Gaps = 4/152 (2%)
 Frame = +2

Query: 551 MDSTCETLECGSPLANVYEIPGEPAIVIDGVPNVDSSNHFQPHT----VTANDAQSKRDP 718
           MD+T + LE  S    V+E+PGEPAIVI+GVP++  S+     +    +T+ +A   RD 
Sbjct: 1   MDNTSKELELESLPTGVFELPGEPAIVINGVPDISPSDAALVLSSTCGITSQNADFFRDS 60

Query: 719 GFGEWLEGRVVEKSFGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDV 898
            FGEWLEGR V K FGE  +SG V+ F++ET WYRVVYEDGD E+L+W EL+E+L+PLD+
Sbjct: 61  SFGEWLEGREVRKLFGESYFSGTVSLFDKETGWYRVVYEDGDSEELDWKELQEVLLPLDI 120

Query: 899 AIPLKTLALKRLRKNEKNAQKSSGNHPTSRRL 994
            +PLK+LA K ++KN+K     S    T  R+
Sbjct: 121 TVPLKSLAQKIIKKNQKTVIHKSVKSATRPRI 152


>ref|XP_004142098.1| PREDICTED: uncharacterized protein LOC101220913 isoform 1 [Cucumis
           sativus] gi|449448691|ref|XP_004142099.1| PREDICTED:
           uncharacterized protein LOC101220913 isoform 2 [Cucumis
           sativus] gi|449502593|ref|XP_004161687.1| PREDICTED:
           uncharacterized LOC101220913 isoform 1 [Cucumis sativus]
           gi|449502597|ref|XP_004161688.1| PREDICTED:
           uncharacterized LOC101220913 isoform 2 [Cucumis sativus]
          Length = 172

 Score =  145 bits (366), Expect = 2e-32
 Identities = 68/130 (52%), Positives = 94/130 (72%), Gaps = 3/130 (2%)
 Frame = +2

Query: 593 ANVYEIPGEPAIVIDGVPNVDSSNHFQPHTVTANDAQSKRDPGFGEWLEGRVVEKSFGEQ 772
           +NVYE+PGEPAIVI+GVP++ + ++        +D + +   GFGEWLEGRVV K F ++
Sbjct: 15  SNVYELPGEPAIVINGVPDIPACDNALALCNPLDDEKLRGSTGFGEWLEGRVVNKLFVDR 74

Query: 773 LYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDVAIPLKTLA---LKRLRKN 943
            Y G + +F++ T WYRV YEDGDFEDL+WH LE++L+P+D+ IPLK LA   LKR RK 
Sbjct: 75  YYYGVIIEFDKVTGWYRVEYEDGDFEDLDWHGLEQVLLPMDITIPLKALALKTLKRSRKA 134

Query: 944 EKNAQKSSGN 973
           +KN +  +GN
Sbjct: 135 QKNRKNKTGN 144


>ref|XP_003521362.1| PREDICTED: uncharacterized protein LOC100814837 [Glycine max]
          Length = 159

 Score =  131 bits (329), Expect = 3e-28
 Identities = 66/128 (51%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
 Frame = +2

Query: 593 ANVYEIPGEPAIVIDGVPNVDSSNHFQPHTVTANDAQSKRD----PGFGEWLEGRVVEKS 760
           A VYE+PGEPAIVI+GVP++         T+   +A SK +     G GEW EGR V+K 
Sbjct: 15  AGVYELPGEPAIVINGVPDIIPGGC----TIAPGNASSKVEMHAPSGLGEWFEGRDVQKW 70

Query: 761 FGEQLYSGKVTKFERETAWYRVVYEDGDFEDLEWHELEEILVPLDVAIPLKTLALKRLRK 940
           F  + +SG VT F++++ WYRV YEDGD EDL+W ELEE+L+PLDV +PLK LA + +RK
Sbjct: 71  FMGRYFSGMVTDFDKDSGWYRVHYEDGDSEDLDWQELEEVLLPLDVTVPLKALARRIVRK 130

Query: 941 NEKNAQKS 964
           ++K+  KS
Sbjct: 131 DKKSVPKS 138


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