BLASTX nr result

ID: Coptis24_contig00008427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008427
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910...   110   1e-22
ref|XP_002868031.1| hypothetical protein ARALYDRAFT_354960 [Arab...   109   2e-22
emb|CBI33873.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002277863.1| PREDICTED: uncharacterized protein At4g17910...   107   8e-22
ref|XP_002304339.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_004148743.1| PREDICTED: uncharacterized protein At4g17910-like [Cucumis sativus]
           gi|449515271|ref|XP_004164673.1| PREDICTED:
           uncharacterized protein At4g17910-like [Cucumis sativus]
          Length = 471

 Score =  110 bits (275), Expect = 1e-22
 Identities = 68/148 (45%), Positives = 82/148 (55%), Gaps = 1/148 (0%)
 Frame = +1

Query: 22  ATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICLTLLLFVGF 201
           A+ K  D  +I  +    Y+ A+A D               A+W+ L +I LTLLL +  
Sbjct: 61  ASLKKSDGLVIRTKSLKRYLAAIAVDFLIIVIPTLLFFTVLADWSCLCAILLTLLLLLLI 120

Query: 202 AVK-RFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRYAKTETYG 378
           A K         + G Q+                   CLCILAVDF+IFPRRYAKTETYG
Sbjct: 121 AAKGMLNHSPTWEAGNQSL---RANISSFRVVVMITTCLCILAVDFRIFPRRYAKTETYG 177

Query: 379 TGLMDLGVGSFVLANALVSRQARDVLST 462
           T LMDLGVGSFVLAN+LVSRQAR+VLST
Sbjct: 178 TSLMDLGVGSFVLANSLVSRQARNVLST 205


>ref|XP_002868031.1| hypothetical protein ARALYDRAFT_354960 [Arabidopsis lyrata subsp.
           lyrata] gi|297313867|gb|EFH44290.1| hypothetical protein
           ARALYDRAFT_354960 [Arabidopsis lyrata subsp. lyrata]
          Length = 746

 Score =  109 bits (273), Expect = 2e-22
 Identities = 65/145 (44%), Positives = 80/145 (55%)
 Frame = +1

Query: 25  TSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICLTLLLFVGFA 204
           +SK  D  I+  R W AY  A++ D               +EW  L ++ L+LLL +  +
Sbjct: 64  SSKKNDDEIVVSRNWKAYTHAISLDFILIVFPMLLFFTVLSEWVYLGAVLLSLLLLI-LS 122

Query: 205 VKRFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRYAKTETYGTG 384
           +   R       G+  ++                 CLCILAVDF IFPRRYAKTETYGT 
Sbjct: 123 LTAKRSSSGLQRGQSLSFRASVSSYRVALMLIT--CLCILAVDFTIFPRRYAKTETYGTS 180

Query: 385 LMDLGVGSFVLANALVSRQARDVLS 459
           LMDLGVGSFVLANA+VSRQARDV S
Sbjct: 181 LMDLGVGSFVLANAIVSRQARDVSS 205


>emb|CBI33873.3| unnamed protein product [Vitis vinifera]
          Length = 480

 Score =  108 bits (271), Expect = 3e-22
 Identities = 65/153 (42%), Positives = 78/153 (50%)
 Frame = +1

Query: 1   DPVHIMKATSKVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICLT 180
           DP     +  K  +  ++    W AY+  +  D               AEWTQ+ +I L 
Sbjct: 54  DPWATETSLKKSDNATVVSKNSW-AYMATMTVDFLVIVLPILLFLTVLAEWTQICAILLM 112

Query: 181 LLLFVGFAVKRFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRYA 360
           L+L    A KRF       GG   T                  CLCILAVDF+IFPRRYA
Sbjct: 113 LVLLFSIAAKRFISSHYSLGG--GTNSLRTNISSYRVSMMIVTCLCILAVDFQIFPRRYA 170

Query: 361 KTETYGTGLMDLGVGSFVLANALVSRQARDVLS 459
           KTETYGT LMDLGVGSFVL NAL+S QAR++ S
Sbjct: 171 KTETYGTSLMDLGVGSFVLGNALISHQARNIAS 203


>ref|XP_002277863.1| PREDICTED: uncharacterized protein At4g17910-like [Vitis vinifera]
          Length = 519

 Score =  107 bits (268), Expect = 8e-22
 Identities = 64/143 (44%), Positives = 75/143 (52%)
 Frame = +1

Query: 31  KVGDKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICLTLLLFVGFAVK 210
           K  D A +  +   AY+  +  D               AEWTQ+ +I L L+L    A K
Sbjct: 113 KKSDNATVVSKNSWAYMATMTVDFLVIVLPILLFLTVLAEWTQICAILLMLVLLFSIAAK 172

Query: 211 RFRXXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRYAKTETYGTGLM 390
           RF       GG   T                  CLCILAVDF+IFPRRYAKTETYGT LM
Sbjct: 173 RFISSHYSLGG--GTNSLRTNISSYRVSMMIVTCLCILAVDFQIFPRRYAKTETYGTSLM 230

Query: 391 DLGVGSFVLANALVSRQARDVLS 459
           DLGVGSFVL NAL+S QAR++ S
Sbjct: 231 DLGVGSFVLGNALISHQARNIAS 253


>ref|XP_002304339.1| predicted protein [Populus trichocarpa] gi|222841771|gb|EEE79318.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  100 bits (248), Expect = 2e-19
 Identities = 60/140 (42%), Positives = 73/140 (52%)
 Frame = +1

Query: 40  DKAIIGCRIWNAYIIALAADXXXXXXXXXXXXXXXAEWTQLSSICLTLLLFVGFAVKRFR 219
           D A++G +    Y+  L  D               A+W  + +I + +L+F   A KRF 
Sbjct: 45  DNAVLGSKELGNYMATLTVDFLFIVLPMLLIFTVLADWVYIFAIPMMVLVFSVVAAKRFD 104

Query: 220 XXXXXDGGRQATYXXXXXXXXXXXXXXXXXCLCILAVDFKIFPRRYAKTETYGTGLMDLG 399
                 G    +                   +CILAVDFKIFPRRYAKTETYGT LMDLG
Sbjct: 105 ASNYSGG----SLSLRTNVSSYRVLVMIITFVCILAVDFKIFPRRYAKTETYGTSLMDLG 160

Query: 400 VGSFVLANALVSRQARDVLS 459
           VGSF+LANALVSRQAR V S
Sbjct: 161 VGSFILANALVSRQARSVSS 180


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