BLASTX nr result
ID: Coptis24_contig00008417
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008417 (511 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37313.3| unnamed protein product [Vitis vinifera] 193 1e-47 ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 193 1e-47 ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2... 186 2e-45 gb|ABK94910.1| unknown [Populus trichocarpa] 186 2e-45 ref|XP_003530871.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 179 2e-43 >emb|CBI37313.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 193 bits (490), Expect = 1e-47 Identities = 94/170 (55%), Positives = 117/170 (68%) Frame = +2 Query: 2 EESSILENDLKDGICELVSISDVLCVACKQLLFRPAVLNCGHVCCQSCIVIPVNEALRCQ 181 EE+ +L+N+L D CE +SI+DV C ACKQLLFRP VLNCGHV C++C IPV+E RC+ Sbjct: 171 EENVVLKNNL-DQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCK 229 Query: 182 LCQSSHPKGLPKVCLELDHLLEKIFPKEYALRREAVQLQPIHGQQGNPSAGAKLDRQKCP 361 +CQ HP G PKVCLELD+ LE+ FP+EYALRREAVQL+ +H + Q Sbjct: 230 VCQVLHPSGFPKVCLELDNFLEEQFPEEYALRREAVQLKAVHLHDAPSTWSKNSGIQGFK 289 Query: 362 QSSPPLTWSYLSWLGDRGLNVHLGIGCDYCGMFPIVGERYKCNDCEEAIG 511 SS P Y +WL D G +H GCD CGM+PIVG+RY+C DC+E IG Sbjct: 290 WSSVPKE-EYSTWLRDNGPKIHPCAGCDSCGMYPIVGDRYRCKDCKEKIG 338 >ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera] Length = 470 Score = 193 bits (490), Expect = 1e-47 Identities = 94/170 (55%), Positives = 117/170 (68%) Frame = +2 Query: 2 EESSILENDLKDGICELVSISDVLCVACKQLLFRPAVLNCGHVCCQSCIVIPVNEALRCQ 181 EE+ +L+N+L D CE +SI+DV C ACKQLLFRP VLNCGHV C++C IPV+E RC+ Sbjct: 190 EENVVLKNNL-DQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCK 248 Query: 182 LCQSSHPKGLPKVCLELDHLLEKIFPKEYALRREAVQLQPIHGQQGNPSAGAKLDRQKCP 361 +CQ HP G PKVCLELD+ LE+ FP+EYALRREAVQL+ +H + Q Sbjct: 249 VCQVLHPSGFPKVCLELDNFLEEQFPEEYALRREAVQLKAVHLHDAPSTWSKNSGIQGFK 308 Query: 362 QSSPPLTWSYLSWLGDRGLNVHLGIGCDYCGMFPIVGERYKCNDCEEAIG 511 SS P Y +WL D G +H GCD CGM+PIVG+RY+C DC+E IG Sbjct: 309 WSSVPKE-EYSTWLRDNGPKIHPCAGCDSCGMYPIVGDRYRCKDCKEKIG 357 >ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1| predicted protein [Populus trichocarpa] Length = 382 Score = 186 bits (472), Expect = 2e-45 Identities = 92/169 (54%), Positives = 112/169 (66%) Frame = +2 Query: 5 ESSILENDLKDGICELVSISDVLCVACKQLLFRPAVLNCGHVCCQSCIVIPVNEALRCQL 184 E + L D + C+ VSI+DV C CKQLLF P VLNCGHV C++CI PVNE L CQ+ Sbjct: 184 EENNLPEDKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEMLTCQV 242 Query: 185 CQSSHPKGLPKVCLELDHLLEKIFPKEYALRREAVQLQPIHGQQGNPSAGAKLDRQKCPQ 364 CQS HP+G PKVCLE DH LE+ FP EYA+R EAVQ + + +P G+ +K Q Sbjct: 243 CQSLHPRGFPKVCLEFDHFLEEYFPTEYAMRIEAVQAKQL--PLNHPLPGSTKASEKSFQ 300 Query: 365 SSPPLTWSYLSWLGDRGLNVHLGIGCDYCGMFPIVGERYKCNDCEEAIG 511 SS T LSW D VH+G+GCD CG++PIVG+RYKC DC E IG Sbjct: 301 SSSATTRENLSWRADPHSKVHVGVGCDSCGVYPIVGDRYKCKDCVEEIG 349 >gb|ABK94910.1| unknown [Populus trichocarpa] Length = 469 Score = 186 bits (472), Expect = 2e-45 Identities = 91/169 (53%), Positives = 112/169 (66%) Frame = +2 Query: 5 ESSILENDLKDGICELVSISDVLCVACKQLLFRPAVLNCGHVCCQSCIVIPVNEALRCQL 184 E + L D + C+ VSI+DV C CKQLLF P VLNCGHV C++CI PVNE L CQ+ Sbjct: 197 EENNLPEDKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNEMLTCQV 255 Query: 185 CQSSHPKGLPKVCLELDHLLEKIFPKEYALRREAVQLQPIHGQQGNPSAGAKLDRQKCPQ 364 CQS HP+G PKVCLE DH LE+ FP EYA+R EAVQ + + + +P + +K Q Sbjct: 256 CQSLHPRGFPKVCLEFDHFLEEYFPTEYAMRIEAVQAKQVPVKFQHPITCSTKASEKSFQ 315 Query: 365 SSPPLTWSYLSWLGDRGLNVHLGIGCDYCGMFPIVGERYKCNDCEEAIG 511 SS T LSW D VH+G+GCD CG++PIVG+RYKC DC E IG Sbjct: 316 SSSATTRENLSWRADPHSKVHVGVGCDSCGVYPIVGDRYKCKDCVEEIG 364 >ref|XP_003530871.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Glycine max] Length = 394 Score = 179 bits (455), Expect = 2e-43 Identities = 81/153 (52%), Positives = 108/153 (70%) Frame = +2 Query: 53 VSISDVLCVACKQLLFRPAVLNCGHVCCQSCIVIPVNEALRCQLCQSSHPKGLPKVCLEL 232 +S++DV C CKQLLF P VLNCGHV CQ C++ +E LRC++CQS HP+GLPKVCLEL Sbjct: 166 LSVADVTCTMCKQLLFHPVVLNCGHVYCQICVINIDDEMLRCKVCQSPHPRGLPKVCLEL 225 Query: 233 DHLLEKIFPKEYALRREAVQLQPIHGQQGNPSAGAKLDRQKCPQSSPPLTWSYLSWLGDR 412 DH LE+ FP+EY RR+A++LQ I + PS+ LD K P+++ W D Sbjct: 226 DHFLEEQFPEEYGQRRDAIELQQIKVKPDTPSS-CSLDGGKKPENT--------DWWSDP 276 Query: 413 GLNVHLGIGCDYCGMFPIVGERYKCNDCEEAIG 511 VH+G+GCD+CGMFPI+G+RY+C DC+E +G Sbjct: 277 DSKVHIGVGCDFCGMFPIIGDRYRCIDCKEKMG 309