BLASTX nr result

ID: Coptis24_contig00008408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008408
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608519.1| hypothetical protein MTR_4g096970 [Medicago ...    96   6e-18
ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago ...    94   2e-17
ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago ...    93   5e-17
ref|XP_003626631.1| hypothetical protein MTR_8g005090 [Medicago ...    91   3e-16
ref|XP_003614716.1| hypothetical protein MTR_5g058190 [Medicago ...    89   6e-16

>ref|XP_003608519.1| hypothetical protein MTR_4g096970 [Medicago truncatula]
           gi|355509574|gb|AES90716.1| hypothetical protein
           MTR_4g096970 [Medicago truncatula]
          Length = 618

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 56/190 (29%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
 Frame = -3

Query: 559 PKDAVFCPWGFLDGISDKETDNEPLNASLNATTTGEVQNIQSTGVHGKKTYANVTRTTYG 380
           P  A  CPW              P  +    + +  VQ++ +  V        ++ +TY 
Sbjct: 43  PLMAFTCPW--------------PCVSDTTPSASATVQSVSAAMVQP------ISTSTYS 82

Query: 379 RDVDTATLPTPGRQGEYPTISIQTDDVDKGLEYCKLGLVGRLDMSK----LNMYDVNNKV 212
           + +D   LPTP  +G+  +I I  ++   G+E CK  L  RL ++K     +  D++NK+
Sbjct: 83  KVIDDRPLPTPCIKGDALSIKICQEEYHMGVEECKKALRARLTLNKGDKPYSARDLSNKI 142

Query: 211 KELWKPKSEWQATPLGKGYIMFCFTDETDYQRVWTQGTWVFDEQVLRLSKWTPNFSTSKE 32
           ++LWK  + W+  PLGKGY  F F    D  ++W  GT      +LRLS+WT +F    +
Sbjct: 143 EKLWKTSAGWKMVPLGKGYYDFHFDSADDLGKIWAAGTVNLKPGLLRLSQWTKDFKYHAQ 202

Query: 31  NHLNGLVWIR 2
              +  +WIR
Sbjct: 203 KQTHVSLWIR 212


>ref|XP_003596392.1| hypothetical protein MTR_2g076760 [Medicago truncatula]
           gi|355485440|gb|AES66643.1| hypothetical protein
           MTR_2g076760 [Medicago truncatula]
          Length = 513

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 4/134 (2%)
 Frame = -3

Query: 391 TTYGRDVDTATLPTPGRQGEYPTISIQTDDVDKGLEYCKLGLVGRLDMSK----LNMYDV 224
           T   R+     LPTP  +GE  +I+I     +KGLE CK  L GRL +SK        D+
Sbjct: 39  TAATRNSSNDMLPTPLIRGESVSITITQQIYEKGLEVCKHNLRGRLVLSKGDKPYTTKDI 98

Query: 223 NNKVKELWKPKSEWQATPLGKGYIMFCFTDETDYQRVWTQGTWVFDEQVLRLSKWTPNFS 44
           + K+++ WK   EW   PLG+G+  F F    D + VW  GT      VLRL +WT +F+
Sbjct: 99  HLKLQKQWKTTGEWSMRPLGRGFFEFTFASNIDLRMVWASGTVNLKPGVLRLFEWTKDFN 158

Query: 43  TSKENHLNGLVWIR 2
             K+ + +  VWIR
Sbjct: 159 MHKQRNTHAQVWIR 172


>ref|XP_003614444.1| hypothetical protein MTR_5g053720 [Medicago truncatula]
           gi|355515779|gb|AES97402.1| hypothetical protein
           MTR_5g053720 [Medicago truncatula]
          Length = 524

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
 Frame = -3

Query: 358 LPTPGRQGEYPTISIQTDDVDKGLEYCKLGLVGRLDMSK----LNMYDVNNKVKELWKPK 191
           LP P  +GE  +I+I     +KGLE CK  L GRL +SK        D++ K+++ WK  
Sbjct: 51  LPKPLIRGESVSITILQKIYEKGLEICKHNLRGRLVLSKGDKPYTTKDIHLKLQKQWKTS 110

Query: 190 SEWQATPLGKGYIMFCFTDETDYQRVWTQGTWVFDEQVLRLSKWTPNFSTSKENHLNGLV 11
            EW   PLG+G+  F F+ +T+ + VW  GT      VLRL +WT +F+ +K+ + +  V
Sbjct: 111 GEWSMRPLGRGFFEFTFSSDTNLRMVWASGTVNLKPGVLRLFEWTKDFNMNKQRNTHAQV 170

Query: 10  WIR 2
           WIR
Sbjct: 171 WIR 173


>ref|XP_003626631.1| hypothetical protein MTR_8g005090 [Medicago truncatula]
           gi|92896032|gb|ABE93038.1| N-6 Adenine-specific DNA
           methylase [Medicago truncatula]
           gi|355520653|gb|AET01107.1| hypothetical protein
           MTR_8g005090 [Medicago truncatula]
          Length = 532

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 4/141 (2%)
 Frame = -3

Query: 412 TYANVTRTTYGRDVDTATLPTPGRQGEYPTISIQTDDVDKGLEYCKLGLVGRLDMSK--- 242
           T+A +   T         LP P  +G+  +I I     +KG++YCK  L GRL ++K   
Sbjct: 38  TFAQILTATTSSQESEEPLPQPSIKGKQLSIKISQPIYEKGVDYCKRNLRGRLILNKGDK 97

Query: 241 -LNMYDVNNKVKELWKPKSEWQATPLGKGYIMFCFTDETDYQRVWTQGTWVFDEQVLRLS 65
                +++ ++++LW   + W    LG+GY  F F  E+D + VW  GT +    VLRL 
Sbjct: 98  PYTSSEIHQRLQKLWNTAAPWSLLSLGRGYYEFYFASESDMRYVWANGTTILKPGVLRLF 157

Query: 64  KWTPNFSTSKENHLNGLVWIR 2
           +W  +F+  ++ + +  VWIR
Sbjct: 158 EWRKDFNMHRQKNTHAQVWIR 178


>ref|XP_003614716.1| hypothetical protein MTR_5g058190 [Medicago truncatula]
           gi|355516051|gb|AES97674.1| hypothetical protein
           MTR_5g058190 [Medicago truncatula]
          Length = 509

 Score = 89.4 bits (220), Expect = 6e-16
 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
 Frame = -3

Query: 418 KKTYANVTRTTYGRDVDTATLPTPGRQGEYPTISIQTDDVDKGLEYCKLGLVGRLDMSKL 239
           K ++A   R   G    +  LP P  +GE  ++SI      +G++YCK+ L GRL ++K 
Sbjct: 47  KPSFAQALR---GPPTSSDPLPLPSIRGEMLSVSISATAYTRGVDYCKINLRGRLVLNKG 103

Query: 238 NM----YDVNNKVKELWKPKSEWQATPLGKGYIMFCFTDETDYQRVWTQGTWVFDEQVLR 71
           +      D+  K++++WK K  W    LG+G+  F F  + D + VW  GT      +LR
Sbjct: 104 DKPYATKDITAKLQKIWKVKGPWHMLSLGRGFYEFFFASQEDMRSVWADGTVSLKPGLLR 163

Query: 70  LSKWTPNFSTSKENHLNGLVWIR 2
           L +WT NF+   +   +  VWIR
Sbjct: 164 LFEWTKNFNLHTQRQTHTQVWIR 186


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