BLASTX nr result

ID: Coptis24_contig00008406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008406
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|...   334   2e-89
ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]            322   7e-86
ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]            321   1e-85
ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|2960...   317   2e-84
ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus] g...   317   3e-84

>ref|XP_003630693.1| Derlin-1 [Medicago truncatula] gi|355524715|gb|AET05169.1| Derlin-1
           [Medicago truncatula] gi|388496922|gb|AFK36527.1|
           unknown [Medicago truncatula]
          Length = 245

 Score =  334 bits (856), Expect = 2e-89
 Identities = 158/217 (72%), Positives = 186/217 (85%), Gaps = 5/217 (2%)
 Frame = +2

Query: 2   QLGIYNPFHIALIHELVFSRFQLWRLFTNFFFLGPFSVNFAIRLLMIARYGVQVERGPFD 181
           QLG+YNP HIAL++E VF RFQ+WRLFTNFFFLGPFS+NF IRLLMI RYGVQ+E+GPFD
Sbjct: 30  QLGLYNPVHIALLYERVFFRFQVWRLFTNFFFLGPFSINFGIRLLMIVRYGVQLEKGPFD 89

Query: 182 RRPADFLWMMFFGAFSMLIFSAIPWFRSPFLGVSLVFMLVYVWSREFPNAKVNIYGLVTL 361
           RR ADFLWMM FGAF++L+ SAIP+F +PFL +SLVFML+YVWSREFPNA++N+YGLV L
Sbjct: 90  RRTADFLWMMIFGAFALLVLSAIPFFWTPFLAISLVFMLLYVWSREFPNAQINLYGLVAL 149

Query: 362 RAFYLPWAMLALDAIFGSSPMPDLLGILAGHLHYFLTVLHPLAGGRNVLKTPNWVHKLVR 541
           +AFYLPWAMLALD IFGS+ MPDLLGI+AGHL+YFLTVLHPLAGG+N+LKTP WVHKLV 
Sbjct: 150 KAFYLPWAMLALDVIFGSALMPDLLGIIAGHLYYFLTVLHPLAGGKNILKTPMWVHKLVA 209

Query: 542 RWGIAYHPTGQA-----VQPDRNAGTAFRGRSYRLSG 637
           RW I   P  +      VQ + ++G  FRGRSYRL+G
Sbjct: 210 RWRIGAPPITRGQPVNNVQQESSSG-VFRGRSYRLNG 245


>ref|XP_003530537.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  322 bits (826), Expect = 7e-86
 Identities = 152/216 (70%), Positives = 177/216 (81%), Gaps = 5/216 (2%)
 Frame = +2

Query: 5   LGIYNPFHIALIHELVFSRFQLWRLFTNFFFLGPFSVNFAIRLLMIARYGVQVERGPFDR 184
           LG+Y+P +IAL ++ VF  FQ+WRLFTN FFLGPFS+NF IRLLMI RYGVQ+E+GPFDR
Sbjct: 31  LGLYHPAYIALFYDKVFYGFQVWRLFTNLFFLGPFSINFGIRLLMIVRYGVQLEKGPFDR 90

Query: 185 RPADFLWMMFFGAFSMLIFSAIPWFRSPFLGVSLVFMLVYVWSREFPNAKVNIYGLVTLR 364
           R ADFLWMM FGAF++L+ SAIP F SPFL V LVFML+YVWSREFPNA++NIYGLV L+
Sbjct: 91  RTADFLWMMIFGAFALLVLSAIPIFWSPFLAVPLVFMLLYVWSREFPNAQINIYGLVALK 150

Query: 365 AFYLPWAMLALDAIFGSSPMPDLLGILAGHLHYFLTVLHPLAGGRNVLKTPNWVHKLVRR 544
           AFYLPWAMLALD IFGS  +PDLLGI+AGHL+YF TVLHPLAGG+N+LKTP WVHKL+ R
Sbjct: 151 AFYLPWAMLALDVIFGSPLIPDLLGIIAGHLYYFFTVLHPLAGGKNILKTPMWVHKLIAR 210

Query: 545 WGIAYHPTGQA-----VQPDRNAGTAFRGRSYRLSG 637
           W I   P  +       Q +R +G AFRGRSYRL G
Sbjct: 211 WRIGVQPISRGPAANNPQQERGSGVAFRGRSYRLGG 246


>ref|XP_003525291.1| PREDICTED: derlin-1-like [Glycine max]
          Length = 246

 Score =  321 bits (823), Expect = 1e-85
 Identities = 156/216 (72%), Positives = 179/216 (82%), Gaps = 5/216 (2%)
 Frame = +2

Query: 5   LGIYNPFHIALIHELVFSRFQLWRLFTNFFFLGPFSVNFAIRLLMIARYGVQVERGPFDR 184
           LG+ +P +IAL+++ VF  FQ WRLFTN FFLGPFS+NF IRLLMI RYGVQ+E+GPFDR
Sbjct: 31  LGLDHPAYIALLYDKVFYGFQAWRLFTNLFFLGPFSINFGIRLLMIVRYGVQLEKGPFDR 90

Query: 185 RPADFLWMMFFGAFSMLIFSAIPWFRSPFLGVSLVFMLVYVWSREFPNAKVNIYGLVTLR 364
           R ADFLWMM FGAF++L+ SAIP F SPFL V LVFML+YVWSREFPNA++NIYGLV L+
Sbjct: 91  RTADFLWMMIFGAFALLVLSAIPIFWSPFLAVPLVFMLLYVWSREFPNAQINIYGLVALK 150

Query: 365 AFYLPWAMLALDAIFGSSPMPDLLGILAGHLHYFLTVLHPLAGGRNVLKTPNWVHKLVRR 544
           AFYLPWAMLALD IFGS  +PDLLGI+AGHL+YFLTVLHPLAGG+N+LKTP WVHKLV R
Sbjct: 151 AFYLPWAMLALDIIFGSPLIPDLLGIIAGHLYYFLTVLHPLAGGKNILKTPMWVHKLVAR 210

Query: 545 WGIAYHP--TGQAV---QPDRNAGTAFRGRSYRLSG 637
           W I   P   GQA    Q +R +G AFRGRSYRL G
Sbjct: 211 WIIGVQPISRGQAANDPQQERGSGVAFRGRSYRLGG 246


>ref|XP_002275238.1| PREDICTED: derlin-1 [Vitis vinifera] gi|296081591|emb|CBI20596.3|
           unnamed protein product [Vitis vinifera]
          Length = 240

 Score =  317 bits (813), Expect = 2e-84
 Identities = 150/211 (71%), Positives = 177/211 (83%)
 Frame = +2

Query: 5   LGIYNPFHIALIHELVFSRFQLWRLFTNFFFLGPFSVNFAIRLLMIARYGVQVERGPFDR 184
           LG++ P + ALI+ELVF  FQ+WRL TNFFFLG FS+NF IRLLMIARYGVQ+E+G F+R
Sbjct: 31  LGLFPPMYTALIYELVFKHFQVWRLVTNFFFLGKFSINFGIRLLMIARYGVQLEKGVFER 90

Query: 185 RPADFLWMMFFGAFSMLIFSAIPWFRSPFLGVSLVFMLVYVWSREFPNAKVNIYGLVTLR 364
           R ADFLWMM FGA ++L+ SAIP   +PFLGVSLVFML+YVWSREFPNA++N+YGLV L+
Sbjct: 91  RTADFLWMMIFGALTLLVLSAIPLLWTPFLGVSLVFMLLYVWSREFPNAQINLYGLVQLK 150

Query: 365 AFYLPWAMLALDAIFGSSPMPDLLGILAGHLHYFLTVLHPLAGGRNVLKTPNWVHKLVRR 544
           AFY PWAMLALD IFGS  +PDLLGI+AGHL+YFLTVLHPL+ G+N+LKTP WVHKLV R
Sbjct: 151 AFYFPWAMLALDVIFGSQILPDLLGIVAGHLYYFLTVLHPLSTGKNILKTPRWVHKLVAR 210

Query: 545 WGIAYHPTGQAVQPDRNAGTAFRGRSYRLSG 637
           + I Y PT    QP+R AG AFRGR YRL+G
Sbjct: 211 FRIGY-PTTAPAQPERAAGVAFRGRGYRLNG 240


>ref|XP_004135679.1| PREDICTED: derlin-1-like [Cucumis sativus]
           gi|449489818|ref|XP_004158425.1| PREDICTED:
           derlin-1-like [Cucumis sativus]
          Length = 242

 Score =  317 bits (812), Expect = 3e-84
 Identities = 151/213 (70%), Positives = 177/213 (83%), Gaps = 1/213 (0%)
 Frame = +2

Query: 2   QLGIYNPFHIALIHELVFSRFQLWRLFTNFFFLGPFSVNFAIRLLMIARYGVQVERGPFD 181
           QLG+Y+P  IAL + LVF  FQ+WRLFTNFFFLG FS+NF IRLLMIARYGVQ+E GPF 
Sbjct: 30  QLGLYDPMLIALDYGLVFKHFQVWRLFTNFFFLGKFSINFGIRLLMIARYGVQLENGPFQ 89

Query: 182 RRPADFLWMMFFGAFSMLIFSAIPWFRSPFLGVSLVFMLVYVWSREFPNAKVNIYGLVTL 361
           RR ADFLWMM FG+ ++L+ +AIP F+ P LG+SLVFML+YVWSREFPNA++NIYGLVTL
Sbjct: 90  RRTADFLWMMIFGSLTLLVLAAIPIFQFPVLGISLVFMLLYVWSREFPNAQINIYGLVTL 149

Query: 362 RAFYLPWAMLALDAIFGSSPMPDLLGILAGHLHYFLTVLHPLAGGRNVLKTPNWVHKLVR 541
           +AFYLPWAMLALD IFGS  +PDLLGILAGHL+YFLTVLHPLAGG+N+L+TP W+ +LV 
Sbjct: 150 KAFYLPWAMLALDVIFGSPLVPDLLGILAGHLYYFLTVLHPLAGGKNILRTPFWIQRLVS 209

Query: 542 RWGIAYHPTGQAVQP-DRNAGTAFRGRSYRLSG 637
           RW I   P  +A  P DR    AFRGRSYRL+G
Sbjct: 210 RWRIGAPPMQRAAVPDDRGTSGAFRGRSYRLNG 242


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