BLASTX nr result

ID: Coptis24_contig00008391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008391
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515392.1| dynamin, putative [Ricinus communis] gi|2235...   111   5e-33
ref|XP_003528397.1| PREDICTED: dynamin-related protein 3A-like [...    94   9e-30
ref|XP_003543135.1| PREDICTED: dynamin-related protein 3A-like [...    90   3e-29
ref|XP_003545730.1| PREDICTED: dynamin-related protein 3A-like [...    90   1e-28
emb|CBI38239.3| unnamed protein product [Vitis vinifera]              100   4e-28

>ref|XP_002515392.1| dynamin, putative [Ricinus communis] gi|223545336|gb|EEF46841.1|
            dynamin, putative [Ricinus communis]
          Length = 797

 Score =  111 bits (278), Expect(2) = 5e-33
 Identities = 75/158 (47%), Positives = 86/158 (54%)
 Frame = -1

Query: 580  AVEXXXXXXXXKSYYDIVRKNIQDLVPKTIMYFLVNHTKRDLLGTFIQNLYRXXXXXXXX 401
            AVE        +SYYDIVRKNIQDLVPK IM+FLVN+TKR+L  TFIQ LYR        
Sbjct: 641  AVEIIVTKLLLRSYYDIVRKNIQDLVPKAIMHFLVNYTKRELHNTFIQKLYRESLFEELL 700

Query: 400  XXXXEVAAQRKRTQNMFQVLQQAVQTLEEVELEVSPKRSIPSSVTEKDLAFXXXXXXXXX 221
                EV A+RK  + +F VLQQAVQTL+EVE +VS + S  S  T               
Sbjct: 701  QEQDEVIAKRKHAREVFHVLQQAVQTLDEVESDVSSRCSYSSVDTGSTTGL--PPGYSPL 758

Query: 220  XXSTANVNISSSASLGRNQKSRRLSYSGEPPLPHKSNG 107
              S +  N SS      N K  RL YS E  LP  SNG
Sbjct: 759  LHSRSGKNRSSHILSSVNTKIPRLYYSDEQSLPVNSNG 796



 Score = 56.6 bits (135), Expect(2) = 5e-33
 Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
 Frame = -2

Query: 1029 AVEVATQQLRSSKEITGKITAGEKLIISDCQK-SRAILTKSDTNGFSTDQELQSRSSSGK 853
            AVE+A QQ++S ++  G     EKL   +  K SRA+L +S  NG + +Q    +S++ K
Sbjct: 520  AVELAMQQVKSIQDNIGV----EKLSTPEKGKGSRAVLARSVANGVTHNQGSHLQSNNEK 575

Query: 852  PISAGNSAGRSWPFSSIFGVGXXXXXXXXXXXXXXXXXXXPLFEQTSVIQLREPPAILRP 673
              +  NS+ R W  SSIF  G                        +S IQLREPP+ILRP
Sbjct: 576  APAGRNSSTRGWGISSIF--GSMASSGMNSISRSLDETFHDTEHSSSTIQLREPPSILRP 633

Query: 672  SE 667
             E
Sbjct: 634  PE 635


>ref|XP_003528397.1| PREDICTED: dynamin-related protein 3A-like [Glycine max]
          Length = 1174

 Score = 93.6 bits (231), Expect(2) = 9e-30
 Identities = 64/167 (38%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
 Frame = -1

Query: 583  EAVEXXXXXXXXKSYYDIVRKNIQDLVPKTIMYFLVNHTKRDLLGTFIQNLYRXXXXXXX 404
            EAVE        KSYYDIVRKN++DLVPK IM+FLVN+TKR+L   FI+ LYR       
Sbjct: 1001 EAVEITVTKLLLKSYYDIVRKNVEDLVPKAIMHFLVNNTKRELHNVFIEKLYREDLFEEM 1060

Query: 403  XXXXXEVAAQRKRTQNMFQVLQQAVQTLEEVELEVSPKRSIPSSVTEKDLAFXXXXXXXX 224
                 EVA +RK  + + +  QQA + L E+ LE        +   E+  +         
Sbjct: 1061 LQEPEEVAKKRKHCRELLRAYQQAFKDLNELPLE--------AETVERGYSLPETTTGLP 1112

Query: 223  XXXSTANVNISSSASLG-------RNQKSRRLSYSGEPPLP-HKSNG 107
                    ++ S+ SLG       +N KSR+ S+SGE   P H SNG
Sbjct: 1113 KIRGLPTSSMYSTGSLGDYYEASPKNTKSRKSSHSGELQSPFHDSNG 1159



 Score = 63.9 bits (154), Expect(2) = 9e-30
 Identities = 45/132 (34%), Positives = 64/132 (48%), Gaps = 7/132 (5%)
 Frame = -2

Query: 1029 AVEVATQQLRSSKEITGKITAGEKLIISD-------CQKSRAILTKSDTNGFSTDQELQS 871
            A+E A QQ RSS+ I   ++  +  + SD         KSR+IL +   NG   DQ +++
Sbjct: 870  AIEAAVQQTRSSR-IALPVSRVKDALESDKGSASERSGKSRSILARH-ANGVVADQGVRA 927

Query: 870  RSSSGKPISAGNSAGRSWPFSSIFGVGXXXXXXXXXXXXXXXXXXXPLFEQTSVIQLREP 691
             S   K +++GN+ G SW  SSIFG G                      +  S I LREP
Sbjct: 928  ASDVEKVVTSGNTGGSSWGISSIFGGGDNRVSVKEMTASKPHTEPVHTVQSFSTIHLREP 987

Query: 690  PAILRPSENQTE 655
            P +LRP E+ +E
Sbjct: 988  PPVLRPLESNSE 999


>ref|XP_003543135.1| PREDICTED: dynamin-related protein 3A-like [Glycine max]
          Length = 826

 Score = 90.1 bits (222), Expect(2) = 3e-29
 Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
 Frame = -1

Query: 583  EAVEXXXXXXXXKSYYDIVRKNIQDLVPKTIMYFLVNHTKRDLLGTFIQNLYRXXXXXXX 404
            EA+E        +SYY IVRKN++DL+PK IM+FLVN+TKR+L   FI+ LYR       
Sbjct: 651  EAIEITVTKLLLRSYYGIVRKNVEDLIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEM 710

Query: 403  XXXXXEVAAQRKRTQNMFQVLQQAVQTLEEVELE---VSPKRSIPSSVTEKDLAFXXXXX 233
                 E+A +RKR + + +  QQA + LEE+ LE   V    S+P +             
Sbjct: 711  LQEPDEIAVKRKRCRELLRAYQQAFKDLEELPLEAETVERGYSLPET----------SGL 760

Query: 232  XXXXXXSTANVNISSS-----ASLGRNQKSRRLSYSGEPPLPHKSNGESHYSG 89
                   T+++  +SS     A+  ++ +S+R S+SGE   P  +N +S+ SG
Sbjct: 761  PKIHGLPTSSMYSTSSSGDYYAASPKHSRSKRSSHSGELQSPLHANADSNGSG 813



 Score = 65.9 bits (159), Expect(2) = 3e-29
 Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
 Frame = -2

Query: 1029 AVEVATQQLRSSKEITGKITAGEKLIISD-------CQKSRAILTKSDTNGFSTDQELQS 871
            A+E+A QQ +SS+ +   ++  +  + SD         KSRAIL +   NG  TD  +++
Sbjct: 519  ALEIAAQQTKSSR-VAIPVSRQKDALESDKGSASERSVKSRAILARQ-ANGVVTDPGVRA 576

Query: 870  RSSSGKPISAGNSAGRSWPFSSIFGVGXXXXXXXXXXXXXXXXXXXPLFEQT-SVIQLRE 694
             S   K + +GN+ G SW  SSIFG G                      EQ+ S+I LRE
Sbjct: 577  ASDVEKIVPSGNTGGSSWGISSIFGGGDSRMTMKENIASKPHAEPVHSIEQSISMIHLRE 636

Query: 693  PPAILRPSENQTE 655
            PP ILRPSE+ +E
Sbjct: 637  PPPILRPSESNSE 649


>ref|XP_003545730.1| PREDICTED: dynamin-related protein 3A-like [Glycine max]
          Length = 823

 Score = 90.1 bits (222), Expect(2) = 1e-28
 Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
 Frame = -1

Query: 583  EAVEXXXXXXXXKSYYDIVRKNIQDLVPKTIMYFLVNHTKRDLLGTFIQNLYRXXXXXXX 404
            EA+E        +SYY IVRKN++DL+PK IM+FLVN+TKR+L   FI+ LYR       
Sbjct: 648  EAIEITVTKLLLRSYYGIVRKNVEDLIPKAIMHFLVNNTKRELHNVFIKKLYRDNLFEEM 707

Query: 403  XXXXXEVAAQRKRTQNMFQVLQQAVQTLEEVELE---VSPKRSIPSSVTEKDLAFXXXXX 233
                 E+A +RKR + + +  QQA + LEE+ LE   V    S+P +             
Sbjct: 708  LQEPDEIAVKRKRCRELLRAYQQAFKDLEELPLEAETVERGYSLPET----------SGL 757

Query: 232  XXXXXXSTANVNISSS-----ASLGRNQKSRRLSYSGEPPLPHKSNGESHYSG 89
                   T+++  +SS     A+  ++ +S+R S+SGE   P  +N +S+ SG
Sbjct: 758  PKIHGLPTSSMYSTSSSGDYYAASPKHSRSKRSSHSGELQSPLHANADSNGSG 810



 Score = 63.5 bits (153), Expect(2) = 1e-28
 Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 8/133 (6%)
 Frame = -2

Query: 1029 AVEVATQQLRSSKEITGKITAGEKLIISD-------CQKSRAILTKSDTNGFSTDQELQS 871
            A+E+A QQ +SS+ +   ++  +  + SD         KSRAIL +   NG   D  +++
Sbjct: 516  ALEIAAQQTKSSR-VAIPVSRQKDALESDKGSASERSVKSRAILARQ-ANGVVPDPGVRA 573

Query: 870  RSSSGKPISAGNSAGRSWPFSSIFGVGXXXXXXXXXXXXXXXXXXXPLFEQT-SVIQLRE 694
             S   K + +GN+ G SW  SSIFG G                      EQ+ S+I LRE
Sbjct: 574  ASDVEKIVPSGNTGGSSWGISSIFGGGDSRMSVKENISSKPHAEPVHSIEQSVSMIHLRE 633

Query: 693  PPAILRPSENQTE 655
            PP ILRPSE+ +E
Sbjct: 634  PPPILRPSESNSE 646


>emb|CBI38239.3| unnamed protein product [Vitis vinifera]
          Length = 923

 Score =  100 bits (249), Expect(2) = 4e-28
 Identities = 64/166 (38%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
 Frame = -1

Query: 583  EAVEXXXXXXXXKSYYDIVRKNIQDLVPKTIMYFLVNHTKRDLLGTFIQNLYRXXXXXXX 404
            EA+E        +SYYDIVRKNI+D VPK IM+FLVNHTKR+L   FI+ LYR       
Sbjct: 745  EAIEISVTKLLLRSYYDIVRKNIEDAVPKAIMHFLVNHTKRELHNVFIRKLYRENLFEEM 804

Query: 403  XXXXXEVAAQRKRTQNMFQVLQQAVQTLEEVELEVSPKRSIPSSVTEKDLAFXXXXXXXX 224
                 EVA +RKRT    +VLQQA++TL+E+  E        S  +              
Sbjct: 805  LQEPDEVAMKRKRTSETLRVLQQALRTLDELPQEAETVEKGYSLGSSDPTGLPKIHGLPT 864

Query: 223  XXXSTANVNISSSASLG-RNQKSRRLSYSGEPPLPHKSNGESHYSG 89
                T +   + S +   +N KSR+ S+SGE   P   N +S+  G
Sbjct: 865  SSLYTTSGGSTQSYTASPKNPKSRKSSHSGELQSPFHGNADSNGGG 910



 Score = 51.6 bits (122), Expect(2) = 4e-28
 Identities = 43/137 (31%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
 Frame = -2

Query: 1029 AVEVATQQLRSSKEIT-----------GKITAGEKLIISDCQKSRAILTKSDTNGFSTDQ 883
            AVE+A QQ++SS+               K    E+ +     K+RAIL +   NG   DQ
Sbjct: 613  AVEMALQQIKSSRLPVPVARQKDGLEPDKAPTSERSL-----KARAILARP-VNGIVADQ 666

Query: 882  ELQSRSSSGKPISAGNSAGRSWPFSSIFGVGXXXXXXXXXXXXXXXXXXXPLFEQT-SVI 706
             ++  +   K  S+G++ G SW  SSIFG                        E + S+I
Sbjct: 667  GVRPVADVEKFTSSGSTTGSSWGISSIFGGSDNRVSAKEISTNKTYSEPVQSVEHSISMI 726

Query: 705  QLREPPAILRPSENQTE 655
             L+EPP IL+PSE+ +E
Sbjct: 727  HLKEPPTILKPSESHSE 743


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