BLASTX nr result

ID: Coptis24_contig00008386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008386
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298784.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002516559.1| protein transporter, putative [Ricinus commu...    98   8e-19
ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_003522697.1| PREDICTED: TOM1-like protein 1-like [Glycine...    88   6e-16
ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine...    86   3e-15

>ref|XP_002298784.1| predicted protein [Populus trichocarpa]
           gi|224092316|ref|XP_002309555.1| predicted protein
           [Populus trichocarpa] gi|222846042|gb|EEE83589.1|
           predicted protein [Populus trichocarpa]
           gi|222855531|gb|EEE93078.1| predicted protein [Populus
           trichocarpa]
          Length = 159

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   YGQYGQRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDM 180
           YG YG +   Q+++QRMHGL+VRDD+ LRNSSYQ  T+ Y PS  P+KPEDKLFGDLVD+
Sbjct: 85  YG-YGPQQGTQYLDQRMHGLSVRDDNGLRNSSYQVPTSSYVPSGKPSKPEDKLFGDLVDI 143

Query: 181 AKLKPKTSTPGRTGSM 228
           +K KP  STPGR GSM
Sbjct: 144 SKFKPGKSTPGRAGSM 159


>ref|XP_002516559.1| protein transporter, putative [Ricinus communis]
           gi|223544379|gb|EEF45900.1| protein transporter,
           putative [Ricinus communis]
          Length = 667

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   YGQYGQRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDM 180
           YG YGQ+   QF+EQRM+GL+VRDD+ LRNSSYQ  T+ Y P   P+KPEDKLFGDLVD+
Sbjct: 593 YG-YGQQQGTQFLEQRMYGLSVRDDNGLRNSSYQVSTSSYVPLKKPSKPEDKLFGDLVDI 651

Query: 181 AKLKPKTSTPGRTGSM 228
           AK KP  STP + GSM
Sbjct: 652 AKFKPTKSTPEKAGSM 667


>ref|XP_002324811.1| predicted protein [Populus trichocarpa] gi|222866245|gb|EEF03376.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   YGQYGQRPEAQFIEQRMHGLTVRDDSALRNSSYQ--TAGYRPSSIPAKPEDKLFGDLVDM 180
           YG YG +   Q++EQRM+G++VRDD+ LRNSSYQ  T  Y PS  P+KPEDKLFGDLVD+
Sbjct: 600 YG-YGLQQGTQYLEQRMNGVSVRDDNGLRNSSYQVSTTPYVPSGKPSKPEDKLFGDLVDI 658

Query: 181 AKLKPKTSTPGRTGSM 228
           +K KP  STPGR G +
Sbjct: 659 SKFKPGKSTPGRAGGL 674


>ref|XP_003522697.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
 Frame = +1

Query: 7   YGQYGQRPEAQFIEQRMHGLTVRDDSALRNSS-YQTAGYRPSSIPAKPEDKLFGDLVDMA 183
           YG YGQ+P  Q++EQ+M+GL+VRDD ALRNS+   +  Y P   P+KPED+LFGDLV+MA
Sbjct: 594 YG-YGQQPRVQYVEQQMYGLSVRDDGALRNSNQVSSTSYVPPGKPSKPEDELFGDLVNMA 652

Query: 184 KLKPKTSTPGRTGSM 228
           K+KPK  TP  TGSM
Sbjct: 653 KVKPK-FTPDPTGSM 666


>ref|XP_003526479.1| PREDICTED: TOM1-like protein 1-like [Glycine max]
          Length = 666

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/76 (61%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +1

Query: 7   YGQYGQRPEAQFIEQRMHGLTVRDDSALRNSSYQTAG--YRPSSIPAKPEDKLFGDLVDM 180
           YG YGQ+P  Q++EQ+M+GL+VRDD A +NS YQ +   Y P   P+KPEDKLFGDLV+M
Sbjct: 594 YG-YGQQPGVQYLEQQMYGLSVRDDGAPKNS-YQVSSPSYVPPGKPSKPEDKLFGDLVNM 651

Query: 181 AKLKPKTSTPGRTGSM 228
           AK+KPK  TP +TGSM
Sbjct: 652 AKVKPK-PTPDQTGSM 666


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