BLASTX nr result

ID: Coptis24_contig00008380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008380
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878067.1| hypothetical protein ARALYDRAFT_324130 [Arab...   117   1e-24
ref|XP_002323617.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
dbj|BAD26585.1| leucine-rich repeat transmembrane protein kinase...   110   9e-23
sp|C0LGP9.1|IMK3_ARATH RecName: Full=Probable leucine-rich repea...   110   9e-23
ref|XP_002526683.1| Systemin receptor SR160 precursor, putative ...   110   9e-23

>ref|XP_002878067.1| hypothetical protein ARALYDRAFT_324130 [Arabidopsis lyrata subsp.
           lyrata] gi|297323905|gb|EFH54326.1| hypothetical protein
           ARALYDRAFT_324130 [Arabidopsis lyrata subsp. lyrata]
          Length = 727

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/88 (67%), Positives = 67/88 (76%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           LD+ RN  +G IP  LG ISSLT LDLS+N L G IP+S+++L  LSF NVSYN LSG V
Sbjct: 263 LDISRNSVSGHIPETLGNISSLTHLDLSQNKLTGEIPISISDLDSLSFFNVSYNNLSGPV 322

Query: 91  PDPLPQKFNSSSFVGNPLLCGYSISTKC 8
           P  L QKFNSSSFVGN LLCGYS+ST C
Sbjct: 323 PTLLSQKFNSSSFVGNLLLCGYSVSTPC 350


>ref|XP_002323617.1| predicted protein [Populus trichocarpa] gi|222868247|gb|EEF05378.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/90 (62%), Positives = 67/90 (74%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           L+L  NQF G IP  +G ISS+ QLDL++N+  G IP SLA L +L++ NVSYN LSGSV
Sbjct: 333 LNLKNNQFKGPIPASIGNISSINQLDLAQNNFSGEIPASLARLANLTYFNVSYNNLSGSV 392

Query: 91  PDPLPQKFNSSSFVGNPLLCGYSISTKCNS 2
           P  + +KFNSSSFVGN  LCGYSIST C S
Sbjct: 393 PSSIAKKFNSSSFVGNLQLCGYSISTPCPS 422



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/64 (48%), Positives = 38/64 (59%)
 Frame = -1

Query: 265 LGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSVPD 86
           L  N+ +G IP  LG    L  LD+S N L+G IP SL N T L  LN+S+N L GS+P 
Sbjct: 139 LFNNRLSGSIPPSLGNCPVLQSLDVSNNSLIGTIPPSLTNSTKLYRLNLSFNSLMGSIPV 198

Query: 85  PLPQ 74
            L Q
Sbjct: 199 GLTQ 202



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 40/74 (54%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           LD+  N   G IP  L   + L +L+LS N LMG IPV L     L FL + +N L+G +
Sbjct: 161 LDVSNNSLIGTIPPSLTNSTKLYRLNLSFNSLMGSIPVGLTQSPSLIFLAIQHNNLTGPI 220

Query: 91  PDPLPQKFNSSSFV 50
           PD    K N SS +
Sbjct: 221 PDSWGSKGNYSSLL 234


>dbj|BAD26585.1| leucine-rich repeat transmembrane protein kinase [Citrullus
           lanatus]
          Length = 164

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/88 (62%), Positives = 65/88 (73%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           +D+  N  +G IP  LG ISSL  LDLS+N L G IP+S+++L  L+F NVSYN LSG V
Sbjct: 29  MDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPV 88

Query: 91  PDPLPQKFNSSSFVGNPLLCGYSISTKC 8
           P  L QKFNSSSFVGN LLCGYS+ST C
Sbjct: 89  PTLLSQKFNSSSFVGNSLLCGYSVSTPC 116


>sp|C0LGP9.1|IMK3_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein
           kinase IMK3; AltName: Full=Protein INFLORESCENCE
           MERISTEM RECEPTOR-LIKE KINASE 3; AltName: Full=Protein
           MERISTEMATIC RECEPTOR-LIKE KINASE; Flags: Precursor
           gi|224589602|gb|ACN59334.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
          Length = 784

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/88 (62%), Positives = 65/88 (73%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           +D+  N  +G IP  LG ISSL  LDLS+N L G IP+S+++L  L+F NVSYN LSG V
Sbjct: 299 MDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPV 358

Query: 91  PDPLPQKFNSSSFVGNPLLCGYSISTKC 8
           P  L QKFNSSSFVGN LLCGYS+ST C
Sbjct: 359 PTLLSQKFNSSSFVGNSLLCGYSVSTPC 386


>ref|XP_002526683.1| Systemin receptor SR160 precursor, putative [Ricinus communis]
           gi|223533983|gb|EEF35705.1| Systemin receptor SR160
           precursor, putative [Ricinus communis]
          Length = 811

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/90 (62%), Positives = 67/90 (74%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           L+L  NQF G IP  +G ISS++QLDL++N+  G IP SLA LT+L+  NVSYN LSG+V
Sbjct: 326 LNLKNNQFKGLIPASIGNISSISQLDLAQNNFTGEIPASLAGLTNLASFNVSYNNLSGAV 385

Query: 91  PDPLPQKFNSSSFVGNPLLCGYSISTKCNS 2
           P  L + FNSSSFVGN  LCGYSIST C S
Sbjct: 386 PALLSKNFNSSSFVGNLQLCGYSISTPCPS 415



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = -1

Query: 271 LDLGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSV 92
           + L  NQ +G IP  LGK+SSL +LD S N + G +P S +NL+ L  LN+  NGL   +
Sbjct: 254 ISLSHNQISGSIPTELGKLSSLQKLDFSNNIINGSMPPSFSNLSSLVSLNLESNGLENQI 313

Query: 91  PDPLPQKFNSS 59
           P+   +  N S
Sbjct: 314 PEAFEKLHNLS 324



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/62 (46%), Positives = 38/62 (61%)
 Frame = -1

Query: 265 LGRNQFTGFIPGGLGKISSLTQLDLSENDLMGFIPVSLANLTHLSFLNVSYNGLSGSVPD 86
           L  N+ +G IP  +G    L  LD+S N L G IP +LAN T L  LN+S+N L+GS+P 
Sbjct: 132 LFNNRLSGSIPPSIGNCPMLQGLDISNNSLTGIIPPTLANSTRLYRLNLSFNSLTGSIPS 191

Query: 85  PL 80
            L
Sbjct: 192 SL 193


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