BLASTX nr result

ID: Coptis24_contig00008368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008368
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]   165   7e-39
ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetyl...   162   5e-38
ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transfera...   161   8e-38
ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit ...   154   1e-35

>emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]
          Length = 169

 Score =  165 bits (417), Expect = 7e-39
 Identities = 82/90 (91%), Positives = 83/90 (92%)
 Frame = +2

Query: 2   VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIAN 181
           VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELA RKHLFCARPQTLY TIA 
Sbjct: 80  VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIAT 139

Query: 182 MDLEDLLPYPPADAKPVAKLINRFLGFPDD 271
           M+LE LLPY P DA PVAKLINRFLGFPDD
Sbjct: 140 MNLESLLPYHPGDAAPVAKLINRFLGFPDD 169


>ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase
           subunit ALG13 homolog [Vitis vinifera]
          Length = 178

 Score =  162 bits (410), Expect = 5e-38
 Identities = 81/90 (90%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIAN 181
           VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELA RKHLFCARPQTLY TIA 
Sbjct: 89  VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIAT 148

Query: 182 MDLEDLLPYPPADAKPVAKLINRFLGFPDD 271
           M+LE LLPY P DA  VAKLINRFLGFPDD
Sbjct: 149 MNLESLLPYTPGDAAAVAKLINRFLGFPDD 178


>ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13
           homolog [Vitis vinifera] gi|296080958|emb|CBI18624.3|
           unnamed protein product [Vitis vinifera]
          Length = 178

 Score =  161 bits (408), Expect = 8e-38
 Identities = 79/90 (87%), Positives = 83/90 (92%)
 Frame = +2

Query: 2   VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIAN 181
           VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELA RKHLFCA PQTL+ T+A+
Sbjct: 89  VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCAHPQTLFQTVAS 148

Query: 182 MDLEDLLPYPPADAKPVAKLINRFLGFPDD 271
           M+LE LLPY P DA PVAKLINRFLGFPDD
Sbjct: 149 MNLESLLPYHPGDAAPVAKLINRFLGFPDD 178


>ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|222838269|gb|EEE76634.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  154 bits (390), Expect = 9e-36
 Identities = 75/90 (83%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIAN 181
           VISHAGSGSIFETL+L KPLIVVVNEDLMDNHQSELAEELA RKHL+CA PQTL+ TI++
Sbjct: 90  VISHAGSGSIFETLQLGKPLIVVVNEDLMDNHQSELAEELAERKHLYCAHPQTLHQTISD 149

Query: 182 MDLEDLLPYPPADAKPVAKLINRFLGFPDD 271
           M++E LLPYPP DA  VAKLINRFLGFPDD
Sbjct: 150 MNIESLLPYPPGDAAAVAKLINRFLGFPDD 179


>ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit alg13, putative
           [Ricinus communis] gi|223548307|gb|EEF49798.1|
           UDP-N-acetylglucosamine transferase subunit alg13,
           putative [Ricinus communis]
          Length = 178

 Score =  154 bits (389), Expect = 1e-35
 Identities = 76/90 (84%), Positives = 82/90 (91%)
 Frame = +2

Query: 2   VISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIAN 181
           VISHAGSGSIFETLRL+KPLIVVVNEDLMDNHQSELAEELA RK+L+CARPQTL++ IA+
Sbjct: 89  VISHAGSGSIFETLRLQKPLIVVVNEDLMDNHQSELAEELAERKYLYCARPQTLHHIIAD 148

Query: 182 MDLEDLLPYPPADAKPVAKLINRFLGFPDD 271
           MDLE LLPY   DA PV KLINRFLGFPDD
Sbjct: 149 MDLESLLPYSAGDATPVVKLINRFLGFPDD 178


Top