BLASTX nr result
ID: Coptis24_contig00008367
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008367 (970 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera] 110 2e-29 ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetyl... 110 1e-28 ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transfera... 106 3e-28 ref|XP_004135629.1| PREDICTED: UDP-N-acetylglucosamine transfera... 100 1e-25 ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|2... 99 3e-25 >emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera] Length = 169 Score = 110 bits (274), Expect(2) = 2e-29 Identities = 55/59 (93%), Positives = 55/59 (93%) Frame = +2 Query: 374 GSGSIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLE 550 GSGSIFETLRLRK LIVVVNEDLMDNHQSELAEELA RKHLFCARPQTLY TIA MNLE Sbjct: 85 GSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIATMNLE 143 Score = 45.8 bits (107), Expect(2) = 2e-29 Identities = 21/25 (84%), Positives = 21/25 (84%) Frame = +1 Query: 553 LLPYLPADAKPVAKLINRFLGFADD 627 LLPY P DA PVAKLINRFLGF DD Sbjct: 145 LLPYHPGDAAPVAKLINRFLGFPDD 169 >ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Vitis vinifera] Length = 178 Score = 110 bits (274), Expect(2) = 1e-28 Identities = 55/59 (93%), Positives = 55/59 (93%) Frame = +2 Query: 374 GSGSIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLE 550 GSGSIFETLRLRK LIVVVNEDLMDNHQSELAEELA RKHLFCARPQTLY TIA MNLE Sbjct: 94 GSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCARPQTLYQTIATMNLE 152 Score = 43.5 bits (101), Expect(2) = 1e-28 Identities = 20/25 (80%), Positives = 20/25 (80%) Frame = +1 Query: 553 LLPYLPADAKPVAKLINRFLGFADD 627 LLPY P DA VAKLINRFLGF DD Sbjct: 154 LLPYTPGDAAAVAKLINRFLGFPDD 178 >ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Vitis vinifera] gi|296080958|emb|CBI18624.3| unnamed protein product [Vitis vinifera] Length = 178 Score = 106 bits (265), Expect(2) = 3e-28 Identities = 52/59 (88%), Positives = 55/59 (93%) Frame = +2 Query: 374 GSGSIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLE 550 GSGSIFETLRLRK LIVVVNEDLMDNHQSELAEELA RKHLFCA PQTL+ T+A+MNLE Sbjct: 94 GSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCAHPQTLFQTVASMNLE 152 Score = 45.8 bits (107), Expect(2) = 3e-28 Identities = 21/25 (84%), Positives = 21/25 (84%) Frame = +1 Query: 553 LLPYLPADAKPVAKLINRFLGFADD 627 LLPY P DA PVAKLINRFLGF DD Sbjct: 154 LLPYHPGDAAPVAKLINRFLGFPDD 178 >ref|XP_004135629.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus] gi|449526666|ref|XP_004170334.1| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13 homolog [Cucumis sativus] Length = 177 Score = 99.8 bits (247), Expect(2) = 1e-25 Identities = 52/77 (67%), Positives = 62/77 (80%), Gaps = 1/77 (1%) Frame = +2 Query: 323 VSQHMKIC-VCLAHNYGLGSGSIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLF 499 ++ H+K + ++H GSGSIFETLRL K LIVVVNEDLMDNHQ ELAEELA RKHL+ Sbjct: 78 IADHLKSASLVISH---AGSGSIFETLRLGKPLIVVVNEDLMDNHQIELAEELAERKHLY 134 Query: 500 CARPQTLYNTIANMNLE 550 CARPQTL+ TI ++NLE Sbjct: 135 CARPQTLHQTIESLNLE 151 Score = 43.5 bits (101), Expect(2) = 1e-25 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +1 Query: 553 LLPYLPADAKPVAKLINRFLGFADD 627 ++PY P DAKPVA LINRFLGF +D Sbjct: 153 IIPYTPGDAKPVAALINRFLGFPED 177 >ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|222838269|gb|EEE76634.1| predicted protein [Populus trichocarpa] Length = 179 Score = 99.4 bits (246), Expect(2) = 3e-25 Identities = 48/59 (81%), Positives = 54/59 (91%) Frame = +2 Query: 374 GSGSIFETLRLRKSLIVVVNEDLMDNHQSELAEELAARKHLFCARPQTLYNTIANMNLE 550 GSGSIFETL+L K LIVVVNEDLMDNHQSELAEELA RKHL+CA PQTL+ TI++MN+E Sbjct: 95 GSGSIFETLQLGKPLIVVVNEDLMDNHQSELAEELAERKHLYCAHPQTLHQTISDMNIE 153 Score = 42.7 bits (99), Expect(2) = 3e-25 Identities = 20/25 (80%), Positives = 20/25 (80%) Frame = +1 Query: 553 LLPYLPADAKPVAKLINRFLGFADD 627 LLPY P DA VAKLINRFLGF DD Sbjct: 155 LLPYPPGDAAAVAKLINRFLGFPDD 179