BLASTX nr result

ID: Coptis24_contig00008361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008361
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21767.3| unnamed protein product [Vitis vinifera]              226   5e-57
ref|XP_002513408.1| conserved hypothetical protein [Ricinus comm...   226   6e-57
ref|XP_002332187.1| predicted protein [Populus trichocarpa] gi|2...   224   2e-56
ref|XP_002317616.1| predicted protein [Populus trichocarpa] gi|2...   221   2e-55
gb|ABK96244.1| unknown [Populus trichocarpa x Populus deltoides]      221   2e-55

>emb|CBI21767.3| unnamed protein product [Vitis vinifera]
          Length = 289

 Score =  226 bits (576), Expect = 5e-57
 Identities = 126/260 (48%), Positives = 157/260 (60%), Gaps = 1/260 (0%)
 Frame = +3

Query: 24  KAESGVTYNNNLCSSSGARKRSRDSFAISINNPLMDLSGSRKLCRNNTATTFSFLGEDIS 203
           KA+SG+TYN  +     ARKR+RD       + +M   G+           FSFLG+DIS
Sbjct: 63  KADSGLTYNLPV-----ARKRARDE------SVMMSFPGN-----------FSFLGQDIS 100

Query: 204 LQIQQQQLEMDYMIAQHMEKVRLMIVETRKEHTRRLTRVIEERMMKSLREKEAEIERTVK 383
           LQIQQQQLE+D  I+QHME+VRL I E RK H+RR+   +EE +MK L+ KE EIE   K
Sbjct: 101 LQIQQQQLEIDRFISQHMERVRLEIEERRKRHSRRIIAAVEEALMKRLKAKEEEIENIGK 160

Query: 384 YNWLLEERIKTVCLENIMWRXXXXXXXXXXXXXQSNLEQVLSHKQQVNNEELDGVAEDAQ 563
            NW LEER+K++C EN +WR             ++NLEQVLS             AE+A+
Sbjct: 161 LNWALEERVKSLCEENQIWRDLAQTNEANANALRNNLEQVLSQ-----------WAEEAE 209

Query: 564 SCCGSSDFGGEGAGKEKSCGTSGRNSSRRW-WCRKCGEEESSVVLLPCRHLCLCTFCAPT 740
           SCCGS+  G     +E     S     R   WCR C +EE+SV+LLPCRHLCLCT C  T
Sbjct: 210 SCCGSTSGGDGDCDRENEEKESREMDDRNMRWCRNCRKEEASVLLLPCRHLCLCTICGST 269

Query: 741 IHKCPICDSNKNGSVHVNMS 800
           +H CPIC SNKN SVHVN+S
Sbjct: 270 LHTCPICKSNKNASVHVNLS 289


>ref|XP_002513408.1| conserved hypothetical protein [Ricinus communis]
           gi|223547316|gb|EEF48811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 333

 Score =  226 bits (575), Expect = 6e-57
 Identities = 128/278 (46%), Positives = 168/278 (60%), Gaps = 16/278 (5%)
 Frame = +3

Query: 15  TTMKAESGVTYNNNLCSSSGARKRSRDSFAISINNPLMDLSGSRKLCRNNTATTFSFLGE 194
           T +K+ESG++YN+        RKRSR+S      NPL+     +    N TA+  SFLG+
Sbjct: 68  TPIKSESGLSYNHLPMQ----RKRSRESI-----NPLLSYPTPQP---NKTASPLSFLGQ 115

Query: 195 DISLQIQQQQLEMDYMIAQHMEKVRLMIVETRKEHTRRLTRVIEERMMKSLREKEAEIER 374
           DISLQIQQQQL++D++I+QHMEKVR+ + + RK   RR+   IEE M+K LR KE EIE+
Sbjct: 116 DISLQIQQQQLDIDHLISQHMEKVRMELEDKRKRQARRIIEAIEEGMLKRLRAKEEEIEK 175

Query: 375 TVKYNWLLEERIKTVCLENIMWRXXXXXXXXXXXXXQSNLEQVLSHKQQVNNEELDGVAE 554
             K NW LEER+K++C+EN +WR             ++NLEQVL+ + +       G+ E
Sbjct: 176 IGKLNWALEERVKSLCIENQIWRDLAQTNEATANALRTNLEQVLAAQVKEERTRCAGLDE 235

Query: 555 --------DAQSCCGSSDFGGEGAGKEK---SCGTSGR-----NSSRRWWCRKCGEEESS 686
                   DAQSCCGSSD G E   K +    C  + R       S    CRKC +EES 
Sbjct: 236 AAAAAEMDDAQSCCGSSDEGEEEGEKRRLSERCTLASRAHDKDTGSSSRMCRKCRKEESC 295

Query: 687 VVLLPCRHLCLCTFCAPTIHKCPICDSNKNGSVHVNMS 800
           V+LLPCRHLCLCT C  +++ CPIC + KN S HVNMS
Sbjct: 296 VLLLPCRHLCLCTVCGSSLNTCPICKATKNASFHVNMS 333


>ref|XP_002332187.1| predicted protein [Populus trichocarpa] gi|222875294|gb|EEF12425.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  224 bits (570), Expect = 2e-56
 Identities = 131/283 (46%), Positives = 166/283 (58%), Gaps = 21/283 (7%)
 Frame = +3

Query: 15  TTMKAESGVTYNNNLCSSSGARKRSRDSFAISINNPLMDLSGSRKLCRNNTATTFSFLGE 194
           T +K+ESG+TYN  +      RKR RD+      NPL  LS    +    T T FSFLG+
Sbjct: 69  TQIKSESGLTYNLPV-----QRKRPRDTI-----NPL--LSYPIPVQSTKTCTPFSFLGQ 116

Query: 195 DISLQIQQQQLEMDYMIAQHMEKVRLMIVETRKEHTRRLTRVIEERMMKSLREKEAEIER 374
           D+S QIQQQQL+ D +I+QHMEKVR+ I E RK   RRL   +E  M+K LR KE EIE+
Sbjct: 117 DLSFQIQQQQLDTDCLISQHMEKVRMEIEEKRKRQARRLLEALETGMVKRLRAKEEEIEK 176

Query: 375 TVKYNWLLEERIKTVCLENIMWRXXXXXXXXXXXXXQSNLEQVLSHKQQVNNEELDG--- 545
             K NW LEE++K++C+EN +WR             +SNLEQVL+   QVN E   G   
Sbjct: 177 IGKLNWALEEKVKSLCMENQIWRDLAQSNEATANALRSNLEQVLA--AQVNEERTLGAGL 234

Query: 546 ------VAEDAQSCCGSS-------DFGGEGAGKEKSCGTSGRNSSR-----RWWCRKCG 671
                 + +DAQSCCGSS       D G E    E+    +G   ++      W CR C 
Sbjct: 235 DNQAAALMDDAQSCCGSSGGDGPVGDDGWEERVSERCTLANGAQDNKGTGAGSWMCRNCN 294

Query: 672 EEESSVVLLPCRHLCLCTFCAPTIHKCPICDSNKNGSVHVNMS 800
           +EES V+LLPCRHLCLCT C  ++H CPIC + KN SVHVN+S
Sbjct: 295 KEESCVLLLPCRHLCLCTVCGSSLHTCPICRATKNASVHVNLS 337


>ref|XP_002317616.1| predicted protein [Populus trichocarpa] gi|222860681|gb|EEE98228.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  221 bits (563), Expect = 2e-55
 Identities = 124/284 (43%), Positives = 167/284 (58%), Gaps = 22/284 (7%)
 Frame = +3

Query: 15  TTMKAESGVTYNNNLCSSSGARKRSRDSFAISINNPLMDLSGSRKLCRNNTATTFSFLGE 194
           T +K++SG+TYN  +      RKR RDS      NPL  LS    +  N T   FSFLG+
Sbjct: 70  TPIKSDSGLTYNVPV-----QRKRPRDSI-----NPL--LSYPTLVQSNKTCAPFSFLGQ 117

Query: 195 DISLQIQQQQLEMDYMIAQHMEKVRLMIVETRKEHTRRLTRVIEERMMKSLREKEAEIER 374
           D+S QIQQQQL++D +++QHMEKVR+ I E R+   RR+   IE  MMK LR KE EIE+
Sbjct: 118 DLSFQIQQQQLDIDCLVSQHMEKVRMEIEEKRRRQARRIIEAIETGMMKRLRAKEEEIEK 177

Query: 375 TVKYNWLLEERIKTVCLENIMWRXXXXXXXXXXXXXQSNLEQVLSHKQQVN-------NE 533
             K NW LEE++K++C+EN +WR             +SNLEQVL+ + + +       ++
Sbjct: 178 IGKLNWALEEKVKSLCVENQIWRDLAQSNEATANTLRSNLEQVLAAQVKEDRTLGAGLDD 237

Query: 534 ELDGVAEDAQSCCGSSDFGGEGAGKEK---------------SCGTSGRNSSRRWWCRKC 668
           +   + +DAQSCCGS+   G+   +EK                 G  G  +S  W CR C
Sbjct: 238 QTAALLDDAQSCCGSNGGDGDDGWEEKVSERCTLANGAQDNNGAGPRGTGTS-SWLCRNC 296

Query: 669 GEEESSVVLLPCRHLCLCTFCAPTIHKCPICDSNKNGSVHVNMS 800
            + ES V+LLPCRHLCLCT C  ++H CPIC + KN SVHVN+S
Sbjct: 297 NKAESCVLLLPCRHLCLCTVCGSSLHTCPICKATKNASVHVNLS 340


>gb|ABK96244.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 340

 Score =  221 bits (563), Expect = 2e-55
 Identities = 124/284 (43%), Positives = 167/284 (58%), Gaps = 22/284 (7%)
 Frame = +3

Query: 15  TTMKAESGVTYNNNLCSSSGARKRSRDSFAISINNPLMDLSGSRKLCRNNTATTFSFLGE 194
           T +K++SG+TYN  +      RKR RDS      NPL  LS    +  N T   FSFLG+
Sbjct: 70  TPIKSDSGLTYNVPV-----QRKRPRDSI-----NPL--LSYPTLVQSNKTCAPFSFLGQ 117

Query: 195 DISLQIQQQQLEMDYMIAQHMEKVRLMIVETRKEHTRRLTRVIEERMMKSLREKEAEIER 374
           D+S QIQQQQL++D +++QHMEKVR+ I E R+   RR+   IE  MMK LR KE EIE+
Sbjct: 118 DLSFQIQQQQLDIDCLVSQHMEKVRMEIEEKRRRQARRIIEAIETGMMKRLRAKEEEIEK 177

Query: 375 TVKYNWLLEERIKTVCLENIMWRXXXXXXXXXXXXXQSNLEQVLSHKQQVN-------NE 533
             K NW LEE++K++C+EN +WR             +SNLEQVL+ + + +       ++
Sbjct: 178 IGKLNWALEEKVKSLCVENQIWRDLAQSNEATANTLRSNLEQVLAAQVKEDRTLGAGLDD 237

Query: 534 ELDGVAEDAQSCCGSSDFGGEGAGKEK---------------SCGTSGRNSSRRWWCRKC 668
           +   + +DAQSCCGS+   G+   +EK                 G  G  +S  W CR C
Sbjct: 238 QTAALLDDAQSCCGSNGGDGDDGWEEKVSERCTLANGAQDNNGAGPRGTGTS-SWLCRNC 296

Query: 669 GEEESSVVLLPCRHLCLCTFCAPTIHKCPICDSNKNGSVHVNMS 800
            + ES V+LLPCRHLCLCT C  ++H CPIC + KN SVHVN+S
Sbjct: 297 NKAESCVLLLPCRHLCLCTVCGSSLHTCPICKATKNASVHVNLS 340


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