BLASTX nr result

ID: Coptis24_contig00008351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008351
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   128   5e-28
gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine...   128   5e-28
gb|ACU01868.1| ubiquitin specific protease 12 variant 1 [Glycine...   128   5e-28
ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]...   126   2e-27
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   125   3e-27

>ref|XP_003535946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13 [Glycine max]
          Length = 1121

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/83 (68%), Positives = 73/83 (87%)
 Frame = -2

Query: 249  YRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVVKHCITLPE 70
            +RG +HL+DML+ +NQT+ +LYYEVLDIPLPEL+CLKTL+++FHHATK EVV H I LP 
Sbjct: 872  FRGMEHLTDMLIHSNQTSDILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPR 931

Query: 69   HSTVADLISDLKRKVELSHPNVE 1
            HSTV+D+I+DLK KV+LSHP+ E
Sbjct: 932  HSTVSDVINDLKSKVDLSHPDAE 954


>gb|ACU01869.1| ubiquitin specific protease 12 variant 2 [Glycine max]
          Length = 792

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/83 (68%), Positives = 73/83 (87%)
 Frame = -2

Query: 249 YRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVVKHCITLPE 70
           +RG +HL+DML+ +NQT+ +LYYEVLDIPLPEL+CLKTL+++FHHATK EVV H I LP 
Sbjct: 675 FRGMEHLTDMLIHSNQTSDILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPR 734

Query: 69  HSTVADLISDLKRKVELSHPNVE 1
           HSTV+D+I+DLK KV+LSHP+ E
Sbjct: 735 HSTVSDVINDLKSKVDLSHPDAE 757


>gb|ACU01868.1| ubiquitin specific protease 12 variant 1 [Glycine max]
          Length = 989

 Score =  128 bits (321), Expect = 5e-28
 Identities = 57/83 (68%), Positives = 73/83 (87%)
 Frame = -2

Query: 249  YRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVVKHCITLPE 70
            +RG +HL+DML+ +NQT+ +LYYEVLDIPLPEL+CLKTL+++FHHATK EVV H I LP 
Sbjct: 872  FRGMEHLTDMLIHSNQTSDILYYEVLDIPLPELQCLKTLKITFHHATKDEVVIHTIRLPR 931

Query: 69   HSTVADLISDLKRKVELSHPNVE 1
            HSTV+D+I+DLK KV+LSHP+ E
Sbjct: 932  HSTVSDVINDLKSKVDLSHPDAE 954


>ref|NP_001238608.1| ubiquitin specific protease 12 [Glycine max]
            gi|255317079|gb|ACU01857.1| ubiquitin specific protease
            12 [Glycine max] gi|255317096|gb|ACU01870.1| ubiquitin
            specific protease 12 [Glycine max]
          Length = 1116

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/83 (68%), Positives = 71/83 (85%)
 Frame = -2

Query: 249  YRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVVKHCITLPE 70
            YRG +HLSDML+ +NQT+ +LYYEVLDIPLPEL+CLKTL+++FHH T  EVV H I LP 
Sbjct: 866  YRGMEHLSDMLIHSNQTSDILYYEVLDIPLPELQCLKTLKIAFHHDTNDEVVIHTIRLPR 925

Query: 69   HSTVADLISDLKRKVELSHPNVE 1
            HSTV+D+I+DLK KV+LSHP+ E
Sbjct: 926  HSTVSDVINDLKSKVDLSHPDAE 948


>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
            ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus]
          Length = 1118

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/83 (73%), Positives = 71/83 (85%)
 Frame = -2

Query: 249  YRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVVKHCITLPE 70
            YRG +HLSDMLV  NQT+ +LYYEVLDIPLPEL+ LKTL+V+FHHATK EVV H I LP+
Sbjct: 866  YRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPK 925

Query: 69   HSTVADLISDLKRKVELSHPNVE 1
             STVAD+I+DLK KVELSHP+ E
Sbjct: 926  QSTVADVINDLKTKVELSHPDAE 948


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