BLASTX nr result

ID: Coptis24_contig00008350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008350
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ90590.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   7e-27
dbj|BAJ88942.1| predicted protein [Hordeum vulgare subsp. vulgare]    108   7e-27
ref|XP_003577516.1| PREDICTED: uncharacterized protein LOC100830...   106   3e-26
ref|XP_002511076.1| conserved hypothetical protein [Ricinus comm...   120   2e-25
ref|NP_001068002.1| Os11g0528300 [Oryza sativa Japonica Group] g...   103   6e-25

>dbj|BAJ90590.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 175

 Score =  108 bits (269), Expect(2) = 7e-27
 Identities = 46/64 (71%), Positives = 57/64 (89%)
 Frame = +1

Query: 1   VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 180
           + +LDLE+PDLWKWLTGQEQPPETVNSNPVF+A++ KV  NL+ H+SPETR+APG+PWVR
Sbjct: 100 LQILDLENPDLWKWLTGQEQPPETVNSNPVFAAIKSKVTDNLSKHSSPETRSAPGQPWVR 159

Query: 181 VSWE 192
             W+
Sbjct: 160 -GWD 162



 Score = 37.4 bits (85), Expect(2) = 7e-27
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +2

Query: 188 GKPWVRGWDDYKKGRDRDSPTYGNQ 262
           G+PWVRGWDD    R  D P YGNQ
Sbjct: 154 GQPWVRGWDD---KRGLDGPKYGNQ 175


>dbj|BAJ88942.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 174

 Score =  108 bits (269), Expect(2) = 7e-27
 Identities = 46/64 (71%), Positives = 57/64 (89%)
 Frame = +1

Query: 1   VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 180
           + +LDLE+PDLWKWLTGQEQPPETVNSNPVF+A++ KV  NL+ H+SPETR+APG+PWVR
Sbjct: 99  LQILDLENPDLWKWLTGQEQPPETVNSNPVFAAIKSKVTDNLSKHSSPETRSAPGQPWVR 158

Query: 181 VSWE 192
             W+
Sbjct: 159 -GWD 161



 Score = 37.4 bits (85), Expect(2) = 7e-27
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +2

Query: 188 GKPWVRGWDDYKKGRDRDSPTYGNQ 262
           G+PWVRGWDD    R  D P YGNQ
Sbjct: 153 GQPWVRGWDD---KRGLDGPKYGNQ 174


>ref|XP_003577516.1| PREDICTED: uncharacterized protein LOC100830558 [Brachypodium
           distachyon]
          Length = 177

 Score =  106 bits (265), Expect(2) = 3e-26
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = +1

Query: 1   VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 180
           + VLDLE+PDLWKWLTGQEQPPE VNSNPVF A++ KV  NL+ HASPETR+APG+PWVR
Sbjct: 102 LQVLDLENPDLWKWLTGQEQPPEAVNSNPVFIAIKSKVTDNLSKHASPETRSAPGQPWVR 161

Query: 181 VSWE 192
             W+
Sbjct: 162 -GWD 164



 Score = 37.0 bits (84), Expect(2) = 3e-26
 Identities = 16/25 (64%), Positives = 17/25 (68%)
 Frame = +2

Query: 188 GKPWVRGWDDYKKGRDRDSPTYGNQ 262
           G+PWVRGWDD    R  D P YGNQ
Sbjct: 156 GQPWVRGWDD---KRGIDGPKYGNQ 177


>ref|XP_002511076.1| conserved hypothetical protein [Ricinus communis]
           gi|223550191|gb|EEF51678.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 188

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 180
           VHVLDLE+PDLWKWLTGQEQPPE VN NPVFSAVRDK+M NL+SHASPETRA PG+PWVR
Sbjct: 112 VHVLDLENPDLWKWLTGQEQPPEAVNINPVFSAVRDKIMNNLDSHASPETRAIPGQPWVR 171

Query: 181 VSWEAMGKRMG 213
             W+ + K  G
Sbjct: 172 -GWDDIKKNPG 181


>ref|NP_001068002.1| Os11g0528300 [Oryza sativa Japonica Group]
           gi|77551232|gb|ABA94029.1| TPR repeat region family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113645224|dbj|BAF28365.1| Os11g0528300 [Oryza sativa
           Japonica Group] gi|125577345|gb|EAZ18567.1| hypothetical
           protein OsJ_34096 [Oryza sativa Japonica Group]
          Length = 186

 Score =  103 bits (257), Expect(2) = 6e-25
 Identities = 46/64 (71%), Positives = 54/64 (84%)
 Frame = +1

Query: 1   VHVLDLEDPDLWKWLTGQEQPPETVNSNPVFSAVRDKVMGNLNSHASPETRAAPGKPWVR 180
           + VLDLE+PDLWKWLT QEQPPE VNSNPVF AV+ KV  NL+ H+SPETR+APG+PWVR
Sbjct: 111 LQVLDLENPDLWKWLTSQEQPPEAVNSNPVFIAVKSKVTDNLSKHSSPETRSAPGQPWVR 170

Query: 181 VSWE 192
             W+
Sbjct: 171 -GWD 173



 Score = 35.4 bits (80), Expect(2) = 6e-25
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +2

Query: 188 GKPWVRGWDDYKKGRDRDSPTYGNQ 262
           G+PWVRGWDD    R  + P YGNQ
Sbjct: 165 GQPWVRGWDD---KRGIEGPKYGNQ 186


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