BLASTX nr result
ID: Coptis24_contig00008349
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00008349 (1379 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-163 gb|AAO41891.1| putative selenium-binding protein [Arabidopsis th... 369 e-159 ref|NP_178481.1| pentatricopeptide repeat-containing protein [Ar... 369 e-159 ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi... 383 e-157 ref|XP_002875235.1| pentatricopeptide repeat-containing protein ... 371 e-154 >ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Vitis vinifera] Length = 623 Score = 385 bits (989), Expect(2) = e-163 Identities = 181/242 (74%), Positives = 214/242 (88%) Frame = -3 Query: 726 VFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVL 547 VF EM T DLVVWNSIIGGFAQN + +EAL+LFKRMKRAGF A+QATLTSVLRACTGL L Sbjct: 209 VFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLAL 268 Query: 546 LEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLA 367 LE GRQVH HV+KF++DLI+NNA++DMYCKCGSLEDA AF RM E+DVISWSTM+ GLA Sbjct: 269 LELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLA 328 Query: 366 QNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSMKRLYGIDPGR 187 QNG S +AL++FESMK SG PNYIT++GVLFACSHAGLV+ GW +F+SMK+L+G+DPGR Sbjct: 329 QNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGR 388 Query: 186 EHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLLGACRVHKNADLATYVAKQILE 7 EHYGC++DLLGRAG+LDEA++ I EME EPD+V WRTLLGACRVH+N DLA Y AK+I+E Sbjct: 389 EHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIE 448 Query: 6 IE 1 +E Sbjct: 449 LE 450 Score = 217 bits (553), Expect(2) = e-163 Identities = 110/170 (64%), Positives = 132/170 (77%), Gaps = 6/170 (3%) Frame = -1 Query: 1226 HNALHA-----KHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVL 1062 H A+ A +HG+ A +TYS+LIKCC AR A++EGK +H+HI+ G+ PKMF+ N L Sbjct: 37 HRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTL 96 Query: 1061 LNMYVKFNLLD-ARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNM 885 LNMYVKFNLL+ A LFD M ERNVVSWTTM+S Y N KL +ALK L+LM REGV PNM Sbjct: 97 LNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNM 155 Query: 884 FTFSSLLRACDGLETLRQLHCSIIKCVLDSDIFVRSALIDIYSKWGELGN 735 FT+SS+LRACDGL LRQLHC IIK L+SD+FVRSALID+YSKW +L N Sbjct: 156 FTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDN 205 Score = 85.9 bits (211), Expect(2) = 2e-26 Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 4/170 (2%) Frame = -1 Query: 1238 KSHKHNALHAKHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLL 1059 K+ K L + G++ + TYS +++ C + + +H I G +F+ + L+ Sbjct: 138 KALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQ---LHCGIIKTGLESDVFVRSALI 194 Query: 1058 NMYVKFNLLDARI-LFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMF 882 ++Y K++ LD + +FD M R++V W +++ G+ EAL M+R G + + Sbjct: 195 DVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQA 254 Query: 881 TFSSLLRACDGLETL---RQLHCSIIKCVLDSDIFVRSALIDIYSKWGEL 741 T +S+LRAC GL L RQ+H ++K D D+ + +ALID+Y K G L Sbjct: 255 TLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSL 302 Score = 61.2 bits (147), Expect(2) = 2e-26 Identities = 38/128 (29%), Positives = 65/128 (50%), Gaps = 4/128 (3%) Frame = -3 Query: 750 GRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVL 571 G + + FS MV D++ W++++ G AQNG +AL+LF+ MK +G N T+ VL Sbjct: 300 GSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVL 359 Query: 570 RACTGLVLLEFGRQVHAHVIKF---ERDLIINNAILDMYCKCGSLEDAEFAFKRMS-ERD 403 AC+ L+E G + K + ++D+ + G L++A M E D Sbjct: 360 FACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPD 419 Query: 402 VISWSTMI 379 ++W T++ Sbjct: 420 SVTWRTLL 427 Score = 109 bits (272), Expect(2) = 2e-24 Identities = 73/222 (32%), Positives = 116/222 (52%), Gaps = 3/222 (1%) Frame = -3 Query: 726 VFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVL 547 +F EM ++V W ++I ++ N D+AL M R G N T +SVLRAC GL Sbjct: 112 LFDEMPERNVVSWTTMISAYSNKLN-DKALKCLILMFREGVRPNMFTYSSVLRACDGLPN 170 Query: 546 LEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITG 373 L RQ+H +IK E D+ + +A++D+Y K L++A F M RD++ W+++I G Sbjct: 171 L---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIGG 227 Query: 372 LAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG-WCHFQSMKRLYGID 196 AQN EAL++F+ MK +G + T+ VL AC+ L++ G H +K D Sbjct: 228 FAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK----FD 283 Query: 195 PGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLL 70 ++D+ + G L++A M E D + W T++ Sbjct: 284 QDLILNNALIDMYCKCGSLEDANSAFSRMV-EKDVISWSTMV 324 Score = 30.8 bits (68), Expect(2) = 2e-24 Identities = 18/79 (22%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Frame = -1 Query: 968 SGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACD---GLETLRQLHCSIIKCVLD 798 + +C+ A++ + M+R GV + T+S L++ C ++ +++H I + Sbjct: 28 ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87 Query: 797 SDIFVRSALIDIYSKWGEL 741 +FV + L+++Y K+ L Sbjct: 88 PKMFVVNTLLNMYVKFNLL 106 Score = 85.9 bits (211), Expect = 2e-14 Identities = 61/221 (27%), Positives = 107/221 (48%), Gaps = 2/221 (0%) Frame = -3 Query: 669 FAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRACTGLVLLEFGRQVHAHVI--KFERD 496 F + A+ M+R G A+ T + +++ C+ ++ G++VH H+ +E Sbjct: 30 FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89 Query: 495 LIINNAILDMYCKCGSLEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKA 316 + + N +L+MY K LE+AE F M ER+V+SW+TMI+ + N + +AL M Sbjct: 90 MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFR 148 Query: 315 SGPTPNYITMVGVLFACSHAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLD 136 G PN T VL AC GL + H +K G++ ++D+ + LD Sbjct: 149 EGVRPNMFTYSSVLRACD--GLPNLRQLHCGIIKT--GLESDVFVRSALIDVYSKWSDLD 204 Query: 135 EAIQFIQEMEDEPDAVIWRTLLGACRVHKNADLATYVAKQI 13 A+ EM D V+W +++G + + + A + K++ Sbjct: 205 NALGVFDEMPTR-DLVVWNSIIGGFAQNSDGNEALNLFKRM 244 Score = 67.0 bits (162), Expect = 1e-08 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 1/117 (0%) Frame = -1 Query: 1202 GLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-DA 1026 G A T + +++ C +E G+ +H H+ + +NN L++MY K L DA Sbjct: 248 GFLADQATLTSVLRACTGLALLELGRQVHVHVLKFDQ--DLILNNALIDMYCKCGSLEDA 305 Query: 1025 RILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRAC 855 F RM E++V+SW+TMV+G +AL+ M+ G PN T +L AC Sbjct: 306 NSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFAC 362 >gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana] Length = 630 Score = 369 bits (947), Expect(3) = e-159 Identities = 173/252 (68%), Positives = 210/252 (83%) Frame = -3 Query: 756 EMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTS 577 ++G + VF EMVTGD +VWNSIIGGFAQN D AL+LFKRMKRAGF A QATLTS Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265 Query: 576 VLRACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVI 397 VLRACTGL LLE G Q H H++K+++DLI+NNA++DMYCKCGSLEDA F +M ERDVI Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325 Query: 396 SWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSM 217 +WSTMI+GLAQNG S EAL +FE MK+SG PNYIT+VGVLFACSHAGL++DGW +F+SM Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385 Query: 216 KRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLLGACRVHKNADL 37 K+LYGIDP REHYGC++DLLG+AGKLD+A++ + EME EPDAV WRTLLGACRV +N L Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445 Query: 36 ATYVAKQILEIE 1 A Y AK+++ ++ Sbjct: 446 AEYAAKKVIALD 457 Score = 201 bits (510), Expect(3) = e-159 Identities = 95/155 (61%), Positives = 124/155 (80%), Gaps = 1/155 (0%) Frame = -1 Query: 1205 HGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-D 1029 HGL A TYS+LIKCCI+ RA+ EG LI +H+Y NGH P MF+ NVL+NMYVKFNLL D Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114 Query: 1028 ARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDG 849 A LFD+M +RNV+SWTTM+S Y CK++ +AL+ LVLM R+ V PN++T+SS+LR+C+G Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174 Query: 848 LETLRQLHCSIIKCVLDSDIFVRSALIDIYSKWGE 744 + +R LHC IIK L+SD+FVRSALID+++K GE Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209 Score = 42.0 bits (97), Expect(3) = e-159 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -2 Query: 1333 PNPTLQISINPSSSPTLLLDDFTKFCYQKDLKRAINTMHSMQN 1205 P TL+ S + S+ TLLL +FT+ CYQ+DL RA+ M S+Q+ Sbjct: 13 PVVTLRCSYS-STDQTLLLSEFTRLCYQRDLPRAMKAMDSLQS 54 Score = 109 bits (273), Expect = 1e-21 Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 2/227 (0%) Frame = -3 Query: 744 IGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRA 565 + + ++F +M +++ W ++I +++ +AL+L M R N T +SVLR+ Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171 Query: 564 CTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISW 391 C G+ + R +H +IK E D+ + +A++D++ K G EDA F M D I W Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228 Query: 390 STMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSMKR 211 +++I G AQN RS AL++F+ MK +G T+ VL AC+ L++ G Q+ Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVH 285 Query: 210 LYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLL 70 + D +VD+ + G L++A++ +M+ E D + W T++ Sbjct: 286 IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331 Score = 75.1 bits (183), Expect = 4e-11 Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 4/163 (2%) Frame = -1 Query: 1217 LHAKHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFN 1038 L + ++ + TYS +++ C + + +++H I G +F+ + L++++ K Sbjct: 152 LMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208 Query: 1037 LL-DARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLR 861 DA +FD M + + W +++ G+ AL+ M+R G + T +S+LR Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268 Query: 860 ACDGLETLR---QLHCSIIKCVLDSDIFVRSALIDIYSKWGEL 741 AC GL L Q H I+K D D+ + +AL+D+Y K G L Sbjct: 269 ACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSL 309 Score = 74.7 bits (182), Expect = 5e-11 Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 2/212 (0%) Frame = -3 Query: 642 ALDLFKRMKRAGFPANQATLTSVLRACTGLVLLEFGRQV--HAHVIKFERDLIINNAILD 469 A+ ++ G A+ AT + +++ C + G + H + + + N +++ Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104 Query: 468 MYCKCGSLEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYIT 289 MY K L DA F +M +R+VISW+TMI+ ++ +AL++ M PN T Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164 Query: 288 MVGVLFACSHAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEM 109 VL +C+ G+ D H +K G++ ++D+ + G+ ++A+ EM Sbjct: 165 YSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220 Query: 108 EDEPDAVIWRTLLGACRVHKNADLATYVAKQI 13 DA++W +++G + +D+A + K++ Sbjct: 221 V-TGDAIVWNSIIGGFAQNSRSDVALELFKRM 251 Score = 68.9 bits (167), Expect = 3e-09 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Frame = -1 Query: 1202 GLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-DA 1026 G A T + +++ C +E G H HI + + +NN L++MY K L DA Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDA 312 Query: 1025 RILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRAC 855 +F++M ER+V++W+TM+SG EALK M+ G PN T +L AC Sbjct: 313 LRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369 >ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g03880, mitochondrial; Flags: Precursor gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana] gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 630 Score = 369 bits (947), Expect(3) = e-159 Identities = 173/252 (68%), Positives = 210/252 (83%) Frame = -3 Query: 756 EMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTS 577 ++G + VF EMVTGD +VWNSIIGGFAQN D AL+LFKRMKRAGF A QATLTS Sbjct: 206 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 265 Query: 576 VLRACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVI 397 VLRACTGL LLE G Q H H++K+++DLI+NNA++DMYCKCGSLEDA F +M ERDVI Sbjct: 266 VLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325 Query: 396 SWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSM 217 +WSTMI+GLAQNG S EAL +FE MK+SG PNYIT+VGVLFACSHAGL++DGW +F+SM Sbjct: 326 TWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 385 Query: 216 KRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLLGACRVHKNADL 37 K+LYGIDP REHYGC++DLLG+AGKLD+A++ + EME EPDAV WRTLLGACRV +N L Sbjct: 386 KKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 445 Query: 36 ATYVAKQILEIE 1 A Y AK+++ ++ Sbjct: 446 AEYAAKKVIALD 457 Score = 201 bits (510), Expect(3) = e-159 Identities = 95/155 (61%), Positives = 124/155 (80%), Gaps = 1/155 (0%) Frame = -1 Query: 1205 HGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-D 1029 HGL A TYS+LIKCCI+ RA+ EG LI +H+Y NGH P MF+ NVL+NMYVKFNLL D Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114 Query: 1028 ARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDG 849 A LFD+M +RNV+SWTTM+S Y CK++ +AL+ LVLM R+ V PN++T+SS+LR+C+G Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174 Query: 848 LETLRQLHCSIIKCVLDSDIFVRSALIDIYSKWGE 744 + +R LHC IIK L+SD+FVRSALID+++K GE Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGE 209 Score = 42.0 bits (97), Expect(3) = e-159 Identities = 21/43 (48%), Positives = 30/43 (69%) Frame = -2 Query: 1333 PNPTLQISINPSSSPTLLLDDFTKFCYQKDLKRAINTMHSMQN 1205 P TL+ S + S+ TLLL +FT+ CYQ+DL RA+ M S+Q+ Sbjct: 13 PVVTLRCSYS-STDQTLLLSEFTRLCYQRDLPRAMKAMDSLQS 54 Score = 109 bits (273), Expect = 1e-21 Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 2/227 (0%) Frame = -3 Query: 744 IGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRA 565 + + ++F +M +++ W ++I +++ +AL+L M R N T +SVLR+ Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171 Query: 564 CTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISW 391 C G+ + R +H +IK E D+ + +A++D++ K G EDA F M D I W Sbjct: 172 CNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 228 Query: 390 STMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSMKR 211 +++I G AQN RS AL++F+ MK +G T+ VL AC+ L++ G Q+ Sbjct: 229 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVH 285 Query: 210 LYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLL 70 + D +VD+ + G L++A++ +M+ E D + W T++ Sbjct: 286 IVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMI 331 Score = 75.1 bits (183), Expect = 4e-11 Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 4/163 (2%) Frame = -1 Query: 1217 LHAKHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFN 1038 L + ++ + TYS +++ C + + +++H I G +F+ + L++++ K Sbjct: 152 LMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208 Query: 1037 LL-DARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLR 861 DA +FD M + + W +++ G+ AL+ M+R G + T +S+LR Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268 Query: 860 ACDGLETLR---QLHCSIIKCVLDSDIFVRSALIDIYSKWGEL 741 AC GL L Q H I+K D D+ + +AL+D+Y K G L Sbjct: 269 ACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSL 309 Score = 74.7 bits (182), Expect = 5e-11 Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 2/212 (0%) Frame = -3 Query: 642 ALDLFKRMKRAGFPANQATLTSVLRACTGLVLLEFGRQV--HAHVIKFERDLIINNAILD 469 A+ ++ G A+ AT + +++ C + G + H + + + N +++ Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104 Query: 468 MYCKCGSLEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYIT 289 MY K L DA F +M +R+VISW+TMI+ ++ +AL++ M PN T Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164 Query: 288 MVGVLFACSHAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEM 109 VL +C+ G+ D H +K G++ ++D+ + G+ ++A+ EM Sbjct: 165 YSSVLRSCN--GMSDVRMLHCGIIKE--GLESDVFVRSALIDVFAKLGEPEDALSVFDEM 220 Query: 108 EDEPDAVIWRTLLGACRVHKNADLATYVAKQI 13 DA++W +++G + +D+A + K++ Sbjct: 221 V-TGDAIVWNSIIGGFAQNSRSDVALELFKRM 251 Score = 68.9 bits (167), Expect = 3e-09 Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Frame = -1 Query: 1202 GLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-DA 1026 G A T + +++ C +E G H HI + + +NN L++MY K L DA Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDA 312 Query: 1025 RILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRAC 855 +F++M ER+V++W+TM+SG EALK M+ G PN T +L AC Sbjct: 313 LRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFAC 369 >ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Cucumis sativus] gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial-like [Cucumis sativus] Length = 586 Score = 383 bits (983), Expect(2) = e-157 Identities = 182/253 (71%), Positives = 215/253 (84%), Gaps = 1/253 (0%) Frame = -3 Query: 756 EMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTS 577 ++G + VF+EM+TGDLVVWNSIIGGFAQN + DE L L+KRMKRA F A+Q+TLTS Sbjct: 161 KLGEQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTS 220 Query: 576 VLRACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRM-SERDV 400 VLRACTGL LLE GRQVH HV+K+++DLI+NNA+LDMYCKCGSLEDA F RM +E+DV Sbjct: 221 VLRACTGLALLELGRQVHVHVLKYDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDV 280 Query: 399 ISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQS 220 ISWSTMI GLAQNG S +AL +FE+MK+ GP PNYIT++GVLFACSHAGLV+DGW +FQS Sbjct: 281 ISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQS 340 Query: 219 MKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLLGACRVHKNAD 40 MK +GIDPGREHYGCI+DLLGRAGKLDEA++ I EM EPDAV WR LLGACRVHKN D Sbjct: 341 MKEHFGIDPGREHYGCIIDLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVD 400 Query: 39 LATYVAKQILEIE 1 LA Y AK+IL+++ Sbjct: 401 LAIYAAKEILKLD 413 Score = 201 bits (512), Expect(2) = e-157 Identities = 99/160 (61%), Positives = 127/160 (79%), Gaps = 1/160 (0%) Frame = -1 Query: 1220 ALHAKHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKF 1041 A+H ++ L A +TYS+LIKCC+ R A+++ +L+H+H++SNG+ PK F+ N L+NMYVKF Sbjct: 6 AMH-RNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKF 64 Query: 1040 NLLD-ARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLL 864 LLD AR LFD M +RNVVSWTTM+S Y N L +AL +L+LM REGV PNM+T+SS+L Sbjct: 65 GLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVL 124 Query: 863 RACDGLETLRQLHCSIIKCVLDSDIFVRSALIDIYSKWGE 744 RACDGL LRQLH SI+K L+SD+FVRSALID YSK GE Sbjct: 125 RACDGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGE 164 Score = 110 bits (276), Expect = 7e-22 Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 3/233 (1%) Frame = -3 Query: 759 LEMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLT 580 ++ G + E +F EM ++V W ++I ++ + +ALD M R G N T + Sbjct: 62 VKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYS 121 Query: 579 SVLRACTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSER 406 SVLRAC GL+ L RQ+H ++K E D+ + +A++D Y K G DA F M Sbjct: 122 SVLRACDGLLNL---RQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITG 178 Query: 405 DVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDG-WCH 229 D++ W+++I G AQN E L +++ MK + + T+ VL AC+ L++ G H Sbjct: 179 DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVH 238 Query: 228 FQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLL 70 +K D ++D+ + G L++A M E D + W T++ Sbjct: 239 VHVLK----YDQDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMI 287 Score = 83.2 bits (204), Expect = 1e-13 Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 2/205 (0%) Frame = -3 Query: 621 MKRAGFPANQATLTSVLRACTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGS 448 M R A+ T + +++ C ++ R VH HV +E + N +++MY K G Sbjct: 7 MHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGL 66 Query: 447 LEDAEFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFA 268 L++A F M +R+V+SW+TMI+ + + + +ALD M G PN T VL A Sbjct: 67 LDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRA 126 Query: 267 CSHAGLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAV 88 C GL++ H +K G++ ++D + G+ +A+ EM D V Sbjct: 127 CD--GLLNLRQLHGSILK--VGLESDVFVRSALIDTYSKLGEQHDALNVFNEM-ITGDLV 181 Query: 87 IWRTLLGACRVHKNADLATYVAKQI 13 +W +++G + + D ++ K++ Sbjct: 182 VWNSIIGGFAQNSDGDETLHLYKRM 206 Score = 71.6 bits (174), Expect = 4e-10 Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 4/163 (2%) Frame = -1 Query: 1217 LHAKHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFN 1038 L + G++ + TYS +++ C + + +H I G +F+ + L++ Y K Sbjct: 107 LMLREGVRPNMYTYSSVLRACDGLLNLRQ---LHGSILKVGLESDVFVRSALIDTYSKLG 163 Query: 1037 LL-DARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLR 861 DA +F+ M ++V W +++ G+ E L M+R V + T +S+LR Sbjct: 164 EQHDALNVFNEMITGDLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLR 223 Query: 860 ACDGLETL---RQLHCSIIKCVLDSDIFVRSALIDIYSKWGEL 741 AC GL L RQ+H ++K D D+ + +AL+D+Y K G L Sbjct: 224 ACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSL 264 Score = 69.3 bits (168), Expect = 2e-09 Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 2/111 (1%) Frame = -1 Query: 1181 TYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-DARILFDRM 1005 T + +++ C +E G+ +H H+ + + +NN LL+MY K L DA +LF RM Sbjct: 217 TLTSVLRACTGLALLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANLLFTRM 274 Query: 1004 -SERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRAC 855 +E++V+SW+TM++G +ALK M+ +G PN T +L AC Sbjct: 275 MTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFAC 325 >ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 579 Score = 371 bits (953), Expect(2) = e-154 Identities = 173/252 (68%), Positives = 211/252 (83%) Frame = -3 Query: 756 EMGRIGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTS 577 ++G + VF EMVTGD +VWNSIIGGFAQN D AL+LFKRMKRAGF A QATLTS Sbjct: 158 KLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTS 217 Query: 576 VLRACTGLVLLEFGRQVHAHVIKFERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVI 397 VLRACTGL LLE G Q H H++K+++DLI+NNA++DMYCKCGSLEDA F +M ERDVI Sbjct: 218 VLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVI 277 Query: 396 SWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSM 217 +WSTMI+GLAQNG S EAL +FE MK+SG PNYIT+VGVLFACSHAGL++DGW +F+SM Sbjct: 278 TWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSM 337 Query: 216 KRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLLGACRVHKNADL 37 K+LYGI+PGREHYGC++DLLG+AGKLD+A++ + EME EPDAV WRTLLGACRV +N L Sbjct: 338 KKLYGINPGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVL 397 Query: 36 ATYVAKQILEIE 1 A Y AK+++ ++ Sbjct: 398 AEYAAKKVIALD 409 Score = 202 bits (515), Expect(2) = e-154 Identities = 95/155 (61%), Positives = 125/155 (80%), Gaps = 1/155 (0%) Frame = -1 Query: 1205 HGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-D 1029 HGL A TYS+LIKCC++ RA+ EG LI +H+Y NGH P MF+ NVL+NMYVKFNLL D Sbjct: 7 HGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLND 66 Query: 1028 ARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRACDG 849 A LFD+M +RNV+SWTTM+S Y CK++ +AL+ LVLM R+GV PN++T+SS+LRAC+G Sbjct: 67 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNG 126 Query: 848 LETLRQLHCSIIKCVLDSDIFVRSALIDIYSKWGE 744 + +R LHC IIK L+SD++VRSALID+++K GE Sbjct: 127 MSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLGE 161 Score = 110 bits (276), Expect = 7e-22 Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 2/227 (0%) Frame = -3 Query: 744 IGERFRVFSEMVTGDLVVWNSIIGGFAQNGNCDEALDLFKRMKRAGFPANQATLTSVLRA 565 + + ++F +M +++ W ++I +++ +AL+L M R G N T +SVLRA Sbjct: 64 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123 Query: 564 CTGLVLLEFGRQVHAHVIK--FERDLIINNAILDMYCKCGSLEDAEFAFKRMSERDVISW 391 C G+ + R +H +IK E D+ + +A++D++ K G EDA F M D I W Sbjct: 124 CNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVW 180 Query: 390 STMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHAGLVDDGWCHFQSMKR 211 +++I G AQN RS AL++F+ MK +G T+ VL AC+ L++ G Q+ Sbjct: 181 NSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---MQAHVH 237 Query: 210 LYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRTLL 70 + D +VD+ + G L++A + +M+ E D + W T++ Sbjct: 238 IVKYDQDLILNNALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTMI 283 Score = 78.6 bits (192), Expect = 4e-12 Identities = 52/201 (25%), Positives = 100/201 (49%), Gaps = 2/201 (0%) Frame = -3 Query: 609 GFPANQATLTSVLRACTGLVLLEFGRQV--HAHVIKFERDLIINNAILDMYCKCGSLEDA 436 G A+ AT + +++ C + G + H + + + + N +++MY K L DA Sbjct: 8 GLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDA 67 Query: 435 EFAFKRMSERDVISWSTMITGLAQNGRSIEALDMFESMKASGPTPNYITMVGVLFACSHA 256 F +M +R+VISW+TMI+ ++ +AL++ M G PN T VL AC+ Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACN-- 125 Query: 255 GLVDDGWCHFQSMKRLYGIDPGREHYGCIVDLLGRAGKLDEAIQFIQEMEDEPDAVIWRT 76 G+ D H +K G++ ++D+ + G+ ++A+ EM DA++W + Sbjct: 126 GMSDVRMLHCGIIKE--GLESDVYVRSALIDVFAKLGEPEDALSVFDEMV-TGDAIVWNS 182 Query: 75 LLGACRVHKNADLATYVAKQI 13 ++G + +D+A + K++ Sbjct: 183 IIGGFAQNSRSDVALELFKRM 203 Score = 76.6 bits (187), Expect = 1e-11 Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 4/163 (2%) Frame = -1 Query: 1217 LHAKHGLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFN 1038 L + G++ + TYS +++ C + + +++H I G +++ + L++++ K Sbjct: 104 LMLRDGVRPNVYTYSSVLRAC---NGMSDVRMLHCGIIKEGLESDVYVRSALIDVFAKLG 160 Query: 1037 LL-DARILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLR 861 DA +FD M + + W +++ G+ AL+ M+R G + T +S+LR Sbjct: 161 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 220 Query: 860 ACDGLETLR---QLHCSIIKCVLDSDIFVRSALIDIYSKWGEL 741 AC GL L Q H I+K D D+ + +AL+D+Y K G L Sbjct: 221 ACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSL 261 Score = 73.9 bits (180), Expect = 9e-11 Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 1/117 (0%) Frame = -1 Query: 1202 GLKAHPVTYSQLIKCCIARRAIEEGKLIHKHIYSNGHVPKMFINNVLLNMYVKFNLL-DA 1026 G A T + +++ C +E G H HI + + +NN L++MY K L DA Sbjct: 207 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDA 264 Query: 1025 RILFDRMSERNVVSWTTMVSGYCNCKLYGEALKYLVLMQREGVVPNMFTFSSLLRAC 855 R +F++M ER+V++W+TM+SG EALK LM+ G PN T +L AC Sbjct: 265 RRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFAC 321